Scleropages formosus (Asian bonytongue): 108925823
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Entry
108925823 CDS
T04919
Symbol
snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108925823 (snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
108925823 (snx27)
Membrane trafficking [BR:
sfm04131
]
Protein recycling
Others
Others
108925823 (snx27)
Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108925823 (snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
VirE3
USP7_C2
PDZ_2
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
108925823
NCBI-ProteinID:
XP_018593620
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Position
18:17743570..17761004
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AA seq
569 aa
AA seq
DB search
MADIVEGDEIRSTAPSVLHPSSRNGSSGGSAIRTGGQTATMVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGERELVLAVLSVPQPEADSLDPGDDGSAQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTTVTVRVRKNC
TTDQVYQAVVMKVGMDNITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVDEKSYQLQKLAEQRKMAMYL
SMLRTCEGYNEITFPHCSCDSRRKGHVVAAISICHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEETTDKD
NKNCSKDEYLPAVEAQKGWRHLGGEIVTS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcgtcgaaggagacgaaattcggtcgactgcgccttccgtgctgcacccg
tcgtctcgaaacggctccagcggcggttcggcaatccggaccggaggccagacagcgacc
atggtgacgtcaggcccacggttggttcggattgtcaagtcggattcgggttatggcttc
aatgttcggggacaagtcagcgaaggagggcagctgcggagcatcaacggggaattgtat
gcccctctccagcacgtcagcgccgtgttaccgggaggggcagccgacagggctggtatc
tccaagggcgaccgcatcctagaagtgaatggagtcaatgtggagggggccacgcacaaa
caggttgtggacctgatccgggccggtgagcgagagctggtgcttgccgttttgtccgtg
ccacagccggaggctgacagcctggatccaggggatgatggtagtgcacagtcctgttat
gactacagcgacaagcaggctgtgcctatctctgtgcccacgtacaagcacgtagagcag
aatggagagaagtttgtggtgtacaatgtatacatggcaggccggcagctctgttccaag
cgctacagggagtttgcaatcttgcaccagaatctgaagagggaatttgccaacttcacc
ttccccaaactgccagggaagtggccgttctcgctgtcagagcagcagctggatgcacgc
cgtaggggtctggaggagtacctggagaaagtgtgctctgttagggtcatcggagagagt
gacatcatgcaggagttcctgtctgaatctgatgaaaactataatggtgtgtcagatgtg
gagctgaggatagccctaccagacaagaccactgtcacagtgcgagttcgcaagaactgc
accaccgaccaagtgtatcaggcagtagtaatgaaggttgggatggacaacattactgcc
agttattttgctctatttgaagttattaaccactcctttgtgcgcaagctggcccctaat
gagttcccccacaagctgtatgtgcagaattatacctcggctgtgccaggtacctgcctc
actctgcgtaagtggctcttcaccactgaggaagagatcctgcttaacgacaacgaactg
gccatcaactactgcttccatcaggctctagatgatgtgaagaagggattcattaaggta
gatgagaagtcctaccagctgcaaaagttggcagagcagcgcaagatggccatgtacctg
agcatgctgcgcacctgtgagggttacaacgagatcacctttccccactgctcttgtgat
tcacgtcgtaagggtcatgtggttgcagccatcagcatctgccactttaagctgcacgca
tgcactgaggatggaaccttggagaaccaggtaattgcctttgaatggagtgagatgcag
cgttgggacacagatgaagagggtatggccttctgttttgagtatgctcgtggagagaag
aagccacgttgggtcaagatcttcaccccatatttcaactatatgcatgagtgttttgag
agggtcttttgtgagctcaaatggagaaaagaggtggaagaggaaaccacagataaggac
aacaagaactgcagtaaagatgaatatcttccagctgttgaggcacagaagggatggcgg
cacctagggggtgagatcgttacctcttaa
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