Scleropages formosus (Asian bonytongue): 108925890
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Entry
108925890 CDS
T04919
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108925890
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfm03310
]
108925890
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108925890
Nuclear receptors [BR:
sfm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108925890
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
108925890
NCBI-ProteinID:
XP_029101828
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Position
18:17205471..17231553
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AA seq
518 aa
AA seq
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MEHEEPESADLRESDAPVGRAQIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQQSSV
SYSCSRQSNCHIDRSSRNRCQSCRLQKCVAQGMSRDAVKFGRMSKRQRDSLFAEVERHRQ
QQQQQQQQQQQRLQGSPGEAQPTLSFHSKESRNRSPHLVQPLAPSYPFHVEPKLPACSPD
AHAYLDCSQGRPQTTTLVYRGSCESAVSVSQGRGDNSGQSEGRGDRYQRFDSRQPSPEQL
GLGMPRGDMRMSYEPEDSFCYPTSMMHIEEVCASIVRSHRETSQYRVEELQALRWKLFSR
EEIHAYQSKSMDEMWQHCALRLTDAVQYVVEFAKRIPGFRQLCQNDQIVLLKNGSMEVVL
VRMTRAFNTENSTVFFDGKFAGTELFKALACSDLIAAVFDFAHSLCALRLTEQQVALFSA
LVLINSDRPCLEERGRVERVKKEVELALSHTLHRDNQEGLMNKLYQKVAILKSLCSLHIE
KLRWFRQLYPLTVHSLFPPLYKELFASDTDLPLLGIHH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgaggagccagagtcagcggaccttcgtgagagcgacgcaccagtcggcaga
gctcaaatcgaggtgattccctgcaagatctgtggtgacaagtcctcaggagtgcattat
ggagtcatcacttgtgaaggctgcaagggctttttccggcgcagccagcagtccagcgtg
tcgtattcctgttcccgtcagagcaactgccacatcgaccgctccagccgcaaccgctgc
cagagctgccgcctgcagaagtgtgtggctcaggggatgagcagagacgccgtcaagttc
ggccgcatgtccaagcgacagagggactccttgttcgccgaggtggagagacaccggcag
cagcaacagcagcagcaacagcagcagcagcagcggctccagggaagcccaggggaagca
cagcccaccctgtctttccacagcaaagagtcacgcaaccgctcgccccatctggtccag
cctctggcaccctcgtaccccttccacgtggagcccaagctgcccgcctgctcccctgat
gcgcacgcctacctggactgctcccaaggcaggccccagaccacaactttggtctacaga
gggtcctgtgagtcagcagtgtccgtttcacagggccgaggggacaacagcggccagtct
gagggcagaggagacaggtatcagagatttgattcccggcagccttcccccgagcagctt
ggcctagggatgcccagaggggacatgagaatgagctatgagccggaggactccttctgc
tacccgacgtcgatgatgcatatcgaagaggtctgtgccagcattgtacgctctcacaga
gagaccagccagtaccgggtggaggaactgcaggctctcaggtggaagctcttcagcaga
gaggagatccatgcctaccagagcaagtccatggatgagatgtggcagcactgtgccctc
cggctgactgatgccgtccagtatgtggtggagtttgccaagcgcatcccgggcttccga
cagctgtgtcagaacgaccagattgttctcctcaagaatggctccatggaggtggtgcta
gtgaggatgaccagagcgttcaacacagagaacagcacagtcttctttgatggcaaattt
gctggtactgagcttttcaaggccctggcctgcagtgatctgatcgcagctgtgttcgac
ttcgctcatagcctctgtgctctgcggctgactgagcaacaggtggcgctcttcagtgcc
ctggtgcttattaactccgaccgcccgtgcctggaggagcgagggagggtggagagagtg
aagaaagaggttgagctggccctgagccacacccttcacagagacaaccaggagggcctc
atgaacaagctctaccagaaggtagcgatattgaaatctctgtgcagcctgcacatcgag
aaactacgctggttccggcagctgtaccccctcactgtgcactccctcttccccccgctg
tacaaggagctctttgcctctgacacagaccttcccctgttgggcatccaccattga
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