Scleropages formosus (Asian bonytongue): 108925924
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Entry
108925924 CDS
T04919
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm02010
ABC transporters
sfm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108925924
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108925924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfm02000
]
108925924
Transporters [BR:
sfm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108925924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
108925924
NCBI-ProteinID:
XP_018593797
LinkDB
All DBs
Position
16:14630232..14664197
Genome browser
AA seq
2266 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTIQLLIEIVWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNDSIISRLVTDVKKILMYSQNDR
SIDAFKGLVRALRNMQSRAAGFKLKDFLRDDETLSAFLQHNASLPPYAVREIVEAKVNLQ
KVLMQGFGVHLRDMCNGSSLEDFVTIADGNVSLLAQDVLCSSPAAWLDRAESHFLSNLDF
LKPIWRDMKSDPRVVHEVSEAAESLLKSLGSLAVELASMKSWRDLRQEILYLTQNATSSP
KLMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGSHNGSEEEPLSAYDNSSTPYCN
NLMKNLESSPISRMIWRALKPLLMGKILYTPHTPATQRIIQEVNKTFQDFGILRDLGGMW
EEIKPKVWNFMENSEEMDLVRTLLQNNASAHIFNSQLSGTDWRVEDVSNFLSKLSEDKRP
QGTAFTWREVFNETDQAVQTISRFMECINLDKLEPVANEERLVNKSMQLLDDRKFWAGIV
FPDIESNSSELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DIVEHSIIRVITGSKEKTGVYIQQMPYPCYVDDVFLRVMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLNNSILWLSWFISSLIPLLISASFLVLILKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKV
VVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSIVLMFFDSFLYGV
MTWYIEAVFPGQYGIPRPWYFPVTKSYWFGESEGNAASALPKKNGNSEAVCMEEEPTHLR
LGVYIKKLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIQSELSTIRRNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEEVKAEMEQIV
NDIGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDLDL
SISSYRNSSSTVSYTKKEDSVSESSSDAGLGSDHESETTTIDVSLISNVIFKHVPAARLV
EDLGHELSYVLPYESAKDGAFVELFHELDDRLFDLGISSYGISDTTLEEIFLKVAEDSGV
DAEMISDGTIPTRRNRRHAFGDHQSCLRPFTEDDGFDCNDSEGDPESRETDWLSGMDGKG
SHQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYP
SLALHPWMYDEQFSFISNDAPADANTQTLLNALTSPPGFGTRCVEGSLIMDAPCEGAEDS
WTVPSVPESVRNIFAKGNWSLENPSPICECSCEGRKKMLPECPAGAGGLPPPQLKLTVTD
TLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQVLPSGDEINQSI
SKIRSLFSLEKGAAADRFLGRLSSFIKGLDTKDNVKVWFNNKGWHSVSAFLNVMNNGILR
ASLPDDKDPSKFGMTAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVSKAKHMQFISGVQPFLYWLANFIWDMCNYVVPATLVIIIFVCFQQEAYVSSTNL
PVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGNNE
IGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMSDALERFGENRFRSPLDWDMVGKNLFA
MAVEGVVFFCITVLIQYRFFIKARPFHTKLKALGEEDEDVARERQRILCGGGHADILELK
ELTKVYKMKQKPAVDRLCVGIPPRECFGLLGVNGAGKTSTFKMLTGDSIVTSGEAYLAGK
SVLTEIDEVHQNMGYCPQFDAINELLTGREHLEFYAILRGVPEKEVCQVAEWGIRKLGLV
KYADKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCVLSIIKEGR
SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPELLPV
MEFIEAELPGSTLKERHRNMLQYQLPSSLTSLARIFSMLAKHKQRLQIEDYSVSQTTLDQ
VFVNFAKDQSDEDHSKDISLTRKDTVVDITQLNSFLKDGKMKESLV
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctctactcagctgggcttgctcctgtggaaaaacttcacctacaggaggagg
caaacgatccagctcctgatcgagatcgtctggcccctcttcatattcttcatcctgatc
tccgtgcggctgcactaccccccttacgagcaacacgaatgccacttcccgaacaaggcc
atgccctcggcgggcaccctgccttgggtccaggggatcatctgcaatgccaacaacccc
tgcttccgctaccccacgcccggcgagtcccccggtgtggtgggcaacttcaacgactcc
atcatctcccgcctggtcacggatgtgaagaagatcctgatgtatagtcagaatgaccgg
agcatcgatgccttcaagggcctggtgcgagccttgaggaacatgcagagccgtgctgca
ggcttcaagctgaaggattttctccgcgacgacgagaccttatcggccttcctgcagcac
aacgcgtcgctcccgccgtacgccgtgcgggagattgtggaagccaaggtcaacctgcag
aaggtactgatgcaagggttcggcgtacacctgagagacatgtgcaacggcagctctctc
gaagacttcgtgaccatcgcagacgggaacgtgtcgctgctggctcaagacgtcctctgc
agctctcccgccgcgtggctcgaccgagccgaatctcacttcctgtccaacctcgacttc
ctcaaacctatctggagggacatgaagtcagacccgcgggtggtccacgaggtttcggaa
gccgcggaaagcctcttgaagagcctgggttccctggcggtggagctagccagcatgaag
agctggagagacctgcgccaggagatcctgtacctgacgcagaatgccaccagctccccc
aagctcatgtaccaggccgtgtcacgcatcgtctgcggacatcccgaaggcggtggcctc
aagatcaagtccctcaactggtatgaagacaacaactacaaggctctctttggcagccac
aacggcagcgaagaagagcccttgtccgcctacgacaactcttccaccccctactgcaac
aacctgatgaagaacctggagtcgagccccatctcacgcatgatctggagggctctgaag
cccctgctcatggggaagatcttgtacacccctcacacgccagccactcagagaatcatt
caggaggtcaacaagactttccaagatttcggcatcctgcgggacctgggtggcatgtgg
gaggagatcaagccgaaggtgtggaacttcatggagaacagcgaggagatggacttggtc
cggacccttctgcagaacaatgccagcgcccacattttcaacagccagctgagtgggaca
gactggagggtggaggatgtgtccaattttttgtccaagctctccgaggacaagcgaccc
caaggcactgccttcacctggcgagaggtcttcaacgagacggaccaggctgtgcagaca
atctctcgctttatggagtgcatcaacttagacaagctggagccagttgcaaatgaagag
aggctggtgaacaaatccatgcaactgctggatgataggaagttctgggcagggattgtg
ttcccagacattgagtccaacagctcagaactgccacccaacgtcaactacaagatccgc
atggacatcgacaatgtggaacggaccaacaagatcaaagatggttactgggatcctggt
ccccgggctgacccgtttgaagacctgcgctacatctggggcgggttctcctacctccag
gacattgttgagcacagcatcattcgtgtaatcaccggtagcaaggagaagacaggtgtt
tacatccaacagatgccctacccttgctacgtggatgatgtgttcctgcgggtgatgagc
cgctctatgcctctcttcatgaccttagcctggatgtactctgtggccattatcatcaag
ggcgtggtctacgagaaggaggcccgcctgaaggaaaccatgaggatcatgggattgaac
aacagtatcctgtggctcagttggttcatcagcagcctcataccactactcattagtgcc
tccttcctggttctcatcctcaagatggggaatctgcttccctatagtgacccaggggtg
gtgttcctcttcctggggtcctttgctgtggtgacaatcatgcagtgcttcctgatcagc
accctcttttcccgtgccaacctggcggctgcctgcggaggcataatctatttcaccttg
tacctcccttatgtgctatgcgtggcctggcaggactacgtgggcttcggtgccaaagtt
gttgttagcttgctgtccccggtcgcctttgggttcggctgtgagtactttgccctgttt
gaggagcaaggagtgggaattcagtggagcaatcttctgtccagccctctggaggaggac
agctacagcctcaccacctccattgtccttatgttctttgattcctttctctatggggtc
atgacctggtacattgaggcagttttcccaggtcagtatgggatccccagaccctggtac
ttccccgtcaccaagtcctactggtttggagagagcgagggaaatgcggcatcagctctt
cctaaaaagaatggaaattcagaagctgtgtgcatggaagaggaaccgacccacctgcgg
ctcggagtctacatcaagaaactggtgaaggtttacagccacgggaataagctggctgtg
gatggcctgacgctgggcttctacgagggccagattacctcttttttgggccacaatggc
gctggcaagaccaccaccatgtccatacttactgggcttttcccccctacatctggcact
gcctacatcatgggcaaggatatccaatccgagctgagcacaatacgacggaacctaggc
gtgtgtccacagcacaatgtactttttagcatgctgactgtggaggaacacatctggttc
tacgctcgcctgaagggcctgtcggaggaggaggtgaaagctgagatggagcagattgtc
aatgacattggtttgccgcacaagcgcaaatccagaacgagccagctgtctggtggcatg
cagaggaaactgtccgtggctttggcgtttgtcggaggatccaaggtcgtcatcctcgat
gaacccaccgctggtgttgacccttacgcccgcagaggcatctgggacctcctgctgaag
tatcgccaaggtcgtaccatcatcctgtccacccaccacatggatgaagctgacatcctg
ggcgatcgcattgccatcatttctcacggcaagctgtgctgtgtgggctcctcgcttttc
ctgaagacccagctgggcactggctactaccttactctggtcaagagggacttggacctc
tcaatcagctcctaccggaactccagcagtacagtctcctacacaaagaaggaggatagt
gtctctgaaagcagctcggatgctggactcggcagcgaccacgagagcgaaaccactacc
attgatgtctccctcatctccaatgtgatattcaagcatgtcccagccgcacgcctcgtg
gaggacttgggccacgagctttcctacgtgctgccctatgagtcagccaaggatggtgcc
tttgtggagctcttccacgagctggacgaccgtttgtttgacctgggcatctctagttac
ggcatctccgacaccactctggaggagatcttccttaaagtggctgaggacagtggagtg
gatgctgagatgatttcagatggcaccatcccgacccgcaggaaccgcaggcatgctttt
ggagaccaccagagctgcctcaggcccttcactgaggatgatggctttgactgcaatgac
tctgagggagatccagagtcccgcgaaacagactggttgagtggaatggatggaaagggt
tcacaccaggtgaagggatggagcctgaagagacagcagtttgtggctctgctgtggaag
aggctcctgtacgctcgccgctccaggaaaggcttctttgctcagattgtgctgccagct
gtgttcgtgtgcatcgccctggtcttcagcctcattgttccccccttcgggaagtacccc
agcctggctcttcatccctggatgtatgacgagcagttcagcttcatcagcaatgatgct
cctgcagatgcgaatacacagacgctattaaacgcgctgaccagcccccctggctttgga
acgcgatgtgtggaaggaagcctcatcatggatgcaccctgcgagggagcagaggacagc
tggactgtgccaagtgtgccagagagcgtgcgaaacattttcgctaaggggaactggagc
ttggagaacccctccccaatctgcgagtgtagctgcgaaggccggaagaagatgctgccc
gagtgtcctgccggagctgggggcctcccacctcctcagctgaagctcaccgtgacagat
accttgcagaatctgacaggcagaaacatttcggactacctggtgaaaacgtatgctcag
atcatcggaaaaagtctgaaaaacaagctctgggtcaatgagttcaggtacgggggtttc
tcactgggcgccagaagctcacaggtccttccctctggtgatgagattaaccagtccatc
tcaaagatcaggagcctcttcagtctcgaaaagggcgccgcagcggaccgtttcctcggc
cgcttgtccagcttcatcaaaggactcgataccaaggataacgtcaaggtatggttcaac
aacaaaggctggcacagcgtcagcgccttccttaatgtgatgaacaacggcatcctgcgg
gccagcttgcctgacgacaaagacccaagcaagtttggcatgactgccttcaaccacccg
ctcaacctgactaaggagcagctgtcccaggtggcactgatgacgacgtccgtggatgtg
ctggtgtccatctgcgtgatctttgccatgtctttcgttcctgccagctttgtggtcttc
ctcatccaggagcgtgtcagcaaggccaagcacatgcagttcattagtggcgtacagccc
ttcctctactggttggccaacttcatttgggatatgtgtaattacgttgtccctgcgacc
ctcgtcataattatctttgtgtgcttccaacaagaggcctacgtgtcctcgaccaacctg
cctgtgttggctcttctgctgctgctttacgggtggtccatcacaccactgatgtatcca
gcttcgttcttcttcaagatccccagtaccgcatatgtggtcctcactagcgtcaacatc
ctaatcggaatcaatggcagcgtttctacttttgtcctagagctctttggcaacaatgaa
atcgggggcattaatgacatcctgaagaacgtgttcctcatttttccgcacttctgcctc
ggccgaggtctgattgacatggtgaagaaccaagcaatgtcagatgctctggagagattt
ggtgagaaccgcttccgttccccactggactgggacatggtgggcaagaatctctttgct
atggccgtggagggtgtcgtcttcttctgcatcactgtgcttatccagtacaggttcttc
attaaagccaggccgttccacaccaaactgaaagcgcttggagaggaggatgaagatgta
gcaagggagaggcagaggatactatgcggaggaggacatgcagatatcttggagctgaaa
gagctgactaaagtgtacaaaatgaaacagaagccagctgtggaccgtctgtgtgtgggc
atcccacctcgagagtgctttggtctgcttggtgtaaacggagccggaaaaacaagcacc
ttcaagatgctgactggagactcgatcgtcacgagtggagaagcttacctggctggaaag
agtgtgctgactgagattgatgaggtccaccagaacatgggctattgccctcagttcgac
gccatcaatgagctgctcacagggcgggagcacctggagttctacgccatcttgcgtggg
gtaccagagaaagaagtctgccaggttgccgaatgggggatccgcaagctgggcctcgtc
aagtatgcggacaaagcggctgggagctacagcgggggaaacatgcggaagctctccact
gccatggctctgattggagggccgcctgtagtgtttctggacgagcccaccacgggcatg
gaccccaaggctcgtcgggccctgtggaactgcgtactcagcatcatcaaggaaggccgt
tcggtcgtcctcacctcacacagcatggaggagtgtgaggccctgtgcactcggatggcc
atcatggtcaatgggcggttccgctgccttggcagcgtccaacacttgaagaacaggttt
ggagacgggtacaccatcatccttagggtggccggacctgatccggaactgctacccgtc
atggagttcatcgaggcggagctcccgggcagcacgctgaaggagcgacatcgcaacatg
ctgcagtatcagctgccctcctccctcacctctctggcgcgcatcttcagcatgcttgcc
aagcacaagcagcggctgcagatagaggactactctgtgtctcagaccacactggaccaa
gtatttgttaattttgccaaggaccaaagtgatgaggaccattcaaaagacatttcactt
accaggaaagacacggttgtggatatcacacagctgaattccttcctcaaagatggcaag
atgaaagaaagccttgtttga
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integrated database retrieval system
