KEGG   Scleropages formosus (Asian bonytongue): 108925925
Entry
108925925         CDS       T04919                                 
Symbol
smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sfm  Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfm03041]
    108925925 (smu1)
Spliceosome [BR:sfm03041]
 Complex B
  Other components
   Complex B specific factors
    108925925 (smu1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_Nup120_160 Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_DCAF12 TFIIIC_delta Beta-prop_IP5PC_F PROPPIN Beta-prop_NOL10_N LisH VPS8_N LisH_PAC1 WD_LRWD1 LisH_WDR26 DUF7165 Beta-prop_ELP1_2nd Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 108925925
NCBI-ProteinID: XP_018593799
UniProt: A0A8C9RI86
LinkDB
Position
16:14553285..14561393
AA seq 513 aa
MSLEIESADVVRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCISFAKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKIWNVKTTECSNTFKSLGTAAGVDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctttggaaattgagtcggccgacgtggtcaggctgatcatgcagtacctgaaggaa
aacaacctgcaccgcacgctggccacgctgcaggaggagaccacggtgtccctcaacacg
gtggacagcatcgagagcttcgtggccgacatcaacagtggacactgggacacagttcta
caggccatccagtccctcaagctcccagacaagaccctcatcgacctgtacgagcaggta
gtgctggagctgatcgagctgcgtgaactgggggcggcgcgctccctcctccgtcagacg
gaccccatgatcatgctgaaacagacccagcctgagcggtacatccacctggagaacctt
ctggcgcgttcctactttgacccccgcgaggcttacccagatggcagcagcaaggagaaa
cggagggcagccattgcacaggccctggcaggggaggtcagcgtggtgcctccctcccgt
ctcatggccctgcttggacaggccctgaagtggcagcagcaccagggtctcttaccccca
ggaatgacaattgacttgttcaggggcaaggctgccgtgaaggatgtggaggaggagcgc
ttccccacgcagctcagtcgtcacattaagtttgggcagaagtcccatgtggaatgtgcc
cgtttctcccccgatggtcagtacctggttacaggatctgtggacggtttcatcgaggtg
tggaacttcactactggcaaaatccgaaaggatctgaagtaccaggcacaggacaacttc
atgatgatggatgatgctgtgctgtgcatgggcttcagccgggacactgaaatgctggcc
acaggggcgcaggacggcaagattaaggtttggaagatccagagcggccagtgcctgcgc
aggtttgagcgtgcccacagcaagggggtcacctgcatcagcttcgccaaggacagcagc
cagctgctgagcgcctctttcgatcagaccattagaatccatgggcttaaatctggcaag
acgctgaaggagttccgtggccactcgtcatttgtgaacgaagccactttcacgcaggac
ggacactacatcatcagtgcctcctcagatggcacagtcaagatttggaatgtgaaaacg
actgaatgcagcaacacgttcaagtcgctggggacagcagctggcgttgacatcactgta
aacaacgtgatcctactgcccaaaaaccctgagcactttgtggtgtgtaaccgatcgaac
accgtggtcatcatgaacatgcaaggccagattgtgaggagcttcagctctggtaagaga
gagggtggagactttgtgtgctgcaccctgtctcctcgaggagagtggatctactgtgtg
ggggaggactttgtgctgtactgcttcagcactgtcaccggcaagctggaaagaacactt
acggttcatgagaaggatgtgatcggcatcgcccaccacccccatcagaacttgatcgct
acctacagtgaggatggcctcctcaagctgtggaaaccttaa

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