Scleropages formosus (Asian bonytongue): 108925927
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Entry
108925927 CDS
T04919
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108925927 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108925927 (aptx)
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
108925927 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
108925927 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
108925927 (aptx)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108925927 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108925927 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
FHA_2
zf-C2H2_6
zf-C2H2
zf-met
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108925927
NCBI-ProteinID:
XP_018593802
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All DBs
Position
16:14569176..14573528
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AA seq
379 aa
AA seq
DB search
MMMMAPGLDRSLCHLNMFRKERWHPQTNPITSPRNSCLGSRSRNDNKRQKVFSGASVQMK
VISSLGSLPVQLKADYNKGYVSVKQLGANPTSVDSVAVGKGNEVKLRPGQLMHVVNQLYP
YTVRFSEEKSEPGVERRGHQGTKRPQQSRSEEEGVDAGMHSQKVARLIVQNASNPGKLAG
ASSTVPLKTISDTPRKTQETSGHWSQGLKASMQDPKMQVYKDDMVVVIKDKYPKARHHWL
VLPWESIASLKALRAEHCSLLRHMHHVAERMVEQCPDASKLRFRLGYHAIPSMSHVHLHV
ISQDFDSPCLKNKKHWNSFTTEYFLESQAVIEMLEKDGQVTVKDGASELLKFPLRCHVCH
KELSTIPQLKEHLRSHLPR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcccctggtctggacagatcattgtgtcacttaaatatgtttcgtaag
gaaagatggcatccacaaaccaatccgattacctcacctagaaacagttgtcttgggtcg
aggtccagaaacgacaataaaagacaaaaagtgttctcgggagcaagtgttcaaatgaaa
gtaatttcttcacttggttcccttccagttcagctgaaagcagattacaacaaaggatac
gttagtgtgaaacagctgggtgcgaaccccacaagtgtggattctgtggctgtgggcaag
ggcaacgaggtgaagctaaggcccggccagctcatgcacgtcgtcaaccagctgtacccg
tacaccgtgcggttttcggaggaaaaatccgaacctggtgttgaacgcaggggacatcaa
ggcaccaaaaggccccagcaatccaggtcagaagaagaaggtgtggatgctgggatgcac
agccaaaaggttgcaagactcattgtccagaacgcctcaaaccctggcaagcttgcagga
gctagcagcacagttcctttgaaaacaatttcggacacaccacgcaagacgcaggagacc
tcaggacactggagccaaggactgaaagcctccatgcaagatcccaaaatgcaggtttac
aaagatgatatggtggtggtcatcaaggataagtaccctaaagcccgtcaccactggcta
gttctgccctgggagtccattgccagcttgaaggccctgcgtgctgaacactgcagtctg
ctgcgccacatgcatcacgtggctgagaggatggtggagcagtgccccgacgccagtaag
ctgcgcttccgtcttggatatcatgctatcccaagcatgagccatgtccaccttcatgta
atcagccaagactttgactcgccttgtctcaaaaataagaaacactggaattcctttaca
actgagtatttcttagaatcacaagctgttattgaaatgctagaaaaagacgggcaggta
acagtgaaggatggggccagtgagttactgaaatttccactccgatgccatgtgtgtcat
aaagagctgtccaccatccctcaactcaaagagcacctcagatctcacctgcccaggtga
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