Scleropages formosus (Asian bonytongue): 108926142
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Entry
108926142 CDS
T04919
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108926142 (ddx17)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108926142 (ddx17)
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108926142 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108926142
NCBI-ProteinID:
XP_018594181
UniProt:
A0A0P7VLU9
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All DBs
Position
3:complement(29642860..29656992)
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AA seq
679 aa
AA seq
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MRGGSSYGDRDRHRGRDRSPRFGSSRSGSKFGNPGERLRKKKWDLDELPKFEKNFYTEHP
EVQRMSQYEVEEFRRKKEITIKGSGCPKPVTSFSQAQFPQYVMDVLMQQNFKEPTAIQAQ
GFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQV
QQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCT
YLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVQRLAEDFLRDYVQINVG
ALELSANHNILQIVDVCMESEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTRRMRR
DGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSE
DYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDSGRGGGG
GGGGRSRFRGSGSNSNNPNLMYQEECERRMRSVGGGDKDSRGGTANSSSFSRDGRGGGGS
RDGDRSSSSSSSSYRDRSSSSRSGGNYGTGSNSSSSFGGVGDQYQGYSGSSGSGSSQYNS
RASSQSGSATSSGGSGGTQESTGQQQGQFGRAGQPPPPAGPQPLMAQQFSPPQPMMGFMG
QAAYPFAPPPPPPPPPPRK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaggttcgtcgtatggggacagagataggcaccgaggacgcgacagaagtccc
cgttttggatccagccgaagtgggtcaaagtttgggaacccaggggagcgtctgcggaaa
aagaaatgggatctggatgagttgcccaagtttgagaagaacttttataccgagcatcca
gaggtgcaacgaatgagccagtatgaagtggaggaattccgacggaagaaggagatcaca
ataaagggctctggatgccccaagcccgttaccagctttagccaggcacagttcccccag
tatgtgatggatgtgctgatgcagcaaaacttcaaggaaccaacagctatccaggcccaa
ggttttccccttgcactaagtgggagggatatggtgggaattgcacagacaggttcgggg
aaaacgctttcgtatcttctgcctgccattgtgcacatcaaccaccagccgtacctagaa
cgaggagatggacccatctgcctggttctggctcccacacgagaactggcccagcaggtg
cagcaggtggcctatgactatggcaaatcgtctcgcatcaaaagcacctgcgtctatggt
ggtgcaccaaaaggaccacagatccgggatctagagagaggggttgagatctgcattgct
actcctgggcgtctaatcgacttccttgaggctggaaagaccaacctgcgacgttgtact
tacctggtgctggatgaggctgaccgcatgctggacatgggttttgagcctcagatccgc
aagatcgttgaacagatccggcctgaccggcagaccctgatgtggagtgccacctggcca
aaagaagtgcagaggcttgctgaggacttcttgcgtgactatgtgcagatcaacgtgggg
gccttggagctgagtgccaaccataatatactccagattgtggatgtctgcatggagagt
gaaaaggataataagctgcttcagctgatggaagaaatcatggctgagaaagagaacaag
accataatctttgttgagacaaagaagcgctgtgatgacctgacccgccgaatgaggaga
gatggttggccagcaatgtgtatccatggtgacaaaagccagccagaacgagactgggtc
ttgacagaattccgtagtggcaaagctccaattcttattgctacggacgtcgcctcccgt
ggtttggatgtggaggatgttaaatttgtcatcaactacgactaccccaattcttcggag
gactatatccatcggattgggcgcacagcgcgcagcaccaacaagggcacagcctacacc
ttcttcacccccggaaacctgcggcaggcacgagagctcatccgtgtcctggaggaggcc
cggcaggccattaatcccaagcttttgcagctggtcgactctggacgaggtggtggaggt
ggagggggcggtcgctctcgcttccgtggcagtggttccaactctaacaaccccaacttg
atgtaccaggaggagtgtgaacgacgaatgcgcagtgttggtgggggtgacaaggacagc
agaggtggcacagcaaacagcagcagctttagtcgagatgggagaggtggcggtgggagt
cgggatggggacaggtcttcctcctcttcatcctcgtcctacagggataggagcagcagt
agccgaagtgggggcaactatggaacaggttccaattccagctcctcttttggaggtgta
ggggaccagtatcaaggttacagtgggagcagtggcagtgggagcagccagtataactcc
agggcaagttcccagtcaggatcagccacttcttctggtggcagtggggggacacaagag
tctacaggtcagcagcaggggcagtttggtagggctggccagcctccgccaccagcaggg
ccccagccgctgatggcccagcagttttcccctccccagcctatgatgggattcatggga
caggctgcctacccctttgctccaccaccacctcctccccctccacctcctaggaagtaa
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