Scleropages formosus (Asian bonytongue): 108926148
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Entry
108926148 CDS
T04919
Name
(RefSeq) rootletin-like
KO
K16469
rootletin
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfm03037
]
108926148
Cilium and associated proteins [BR:
sfm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108926148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
KASH_CCD
Crescentin
Sec10_N
DUF7491
Motif
Other DBs
NCBI-GeneID:
108926148
NCBI-ProteinID:
XP_018594194
LinkDB
All DBs
Position
3:28252456..28303436
Genome browser
AA seq
1963 aa
AA seq
DB search
MSSWGEPCEQPIGLEAVIQKLAESLVHSGSSGEETSLMLSEEGPCPSAVPIPVCIHQIAT
HNLAEQPPVPGEGMQRVSLQDENGLLKGPVSQTHMDQDQLLVKQTALSDRVEQLLEVQSC
NVAGDGTPMEHRRLMEVERTYKQKLQAYQEGQQRQAQLVQRLQAKVLQYKKRCGELEEEV
LERTSECGRLKLSLQAHLDTSAGHLRRLEQEYSMDLQSRICQREEEQRRSASLGQVNTML
RKQLEQASAANSSLIERLRRAQDEADQKDMQLRREQETCVSRLSRKQARVRALWRQTASL
RNCFTQLRASADRSLSDMRIECVAVSHRLYAACKSLEDRLSLHSAPNGQEVSLLEKQLKD
KLKEAMQLQAHWGAEKVELNSRILDLTSTVMQLQGKITEKDRDLTSLKSTLERMEKSKAK
CCSEMEELRREISNLQQTLNSVTQLACGDSGASEDAIEGLDSHHPSPTHQQSSPCLSYSD
RALMVVQNTLSQYKLQVQELHTQLENTQKQMATLHRQLQEGEAERKDIMQRAEQLQQERQ
HSERAFEESYRDAQGYRSSLDIMASEKGDLEKLVLSLNQQIDSQRVELEALRSGDLELRR
QQDLLLQQQEELRRESEHWRAEAERRESSLEQLEDKYSNLRKELLVLKENLSHVTLQKEM
LEDEKASLSQTISKIEQQNAEQVLAVTKMQSEEARLRDSLAKMGALTEGLAKDKVELNRM
LLQVEREKAELVERKREVELARTAAREKVSRLEQELLDISAEKRTLESSQNHLVETQQSQ
EEELRLLKKEKAQAVEQHAQASRQRRALSEQLALSRQEMECQAAALNRAVQEREALAKDK
ACLEVQLSVAERNALGLAQELTALRTRAEKEALESAVFEAQELTSVLEKEGVQLDAEKQG
LLQAKEALTREIARLQGELELQAIRCEQERKMLEGRMAQAEEDAQLALSNSERSHRQQLD
AEKEQLRTELIAQSKEVERQLRQECKELRVQSQAEREQLQQELVRLQKELKESLRQAEYH
KQQALSLKEVEKTALSEKLTTLQQELAAAGMEMERLQRNTLSQQEQDKKTISDLNSEVQD
LHLHLEELQSSQEEAMQRLRVQIKEEAHSRESALQKAEALQKKLQVEEEGRKAGQQELQE
AHRELRKCVQEKDAQQNEVLDLRRALGDEIQDKEALLNSNQELRSLIKKAESDRISLRQA
LEEKEKQLLVLEDRKSSLQQEAAELRSSLQILERSRLQARRDMQELRRQVKTLQEEVGQR
SQELQDLQSRLSREELQEEASRREALALKERALESEAAREAALKEVTGLHNCIMELQEAK
RHCEEELKVSKAKLRESERRHKEDVERLEGSLQDAALQMREVSLRASSAEGRVQGLEEQL
GKGDSVCRELEKRLTCLSSILRCTLGIGWSGRCQVPNSKREASPNKGRECLERSTTSPSR
GTGRSPVHSVPTPQAETWDSELERVQEALRKFLQELRDAQKARNEAQVQVQNLSHQLEEV
QSSRDRIQNQQQLLQKALTKVEEDKKEAVDRLKVLQTYLVAQEEAQRQADKERQHLKEEV
AMLKCRLQAAEADARALQEKLVQAQATESILDAERERLKETLEAAKGRASQLELHQHSLD
GELQRIRTVAAEKEADVGALQEQLAALQRELGESKERCGTLRTDAERQGAALARAESRES
KLQDQLQSLSASLNEASASVGALQEQNAQLQKGLAASEQEGRKLQEHLETTQEALSKCTN
QNYGLAVQVHNLQRSLEEMEERRHELEVQTKALQETLKQRQDNDNERSRQLQEEKNSLRE
QVTSLQSSLERLQSERSQLGTVLAHLGKDKASLRKILDKVELERLRLEEELARVARERER
LEQELSSMRAEVQQLQAKISQMERAHPQHLLEVEERHQQELEVETRHLMAAQQQAEHALE
VREKAHRQRVTCLEEQVCILKEQLEQEMRRRQVYVSQMMQPEM
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttggggtgaaccgtgtgagcagcccattggattggaggctgtgattcagaag
ctggcagagtctctggtgcactctggcagcagtggggaagaaacatcattgatgctttcg
gaagaaggcccttgcccatctgccgtgcccatccctgtttgcatccaccagattgccact
cacaaccttgctgagcaacctccagtccctggcgaagggatgcagagggtctccttgcag
gatgaaaacgggctcctgaagggcccggtgtctcagacccatatggaccaggaccagctc
cttgtcaagcagacagcactcagtgacagggtagaacagttgctggaggtgcaatcttgc
aatgtggctggtgatggaacccccatggagcaccgcaggctcatggaagtggagagaacc
tataagcagaaactacaagcctaccaggaagggcaacaaagacaagcccagctggtacag
aggctgcaggcaaaggtgctgcagtacaaaaaaaggtgtggtgagttggaggaagaggtg
ctggagagaacatctgagtgtggaaggctgaagctctcgttgcaggcccacttagacaca
tcggcaggccacctgcgaaggctggagcaggagtacagcatggacctccagagcagaatt
tgtcagcgggaggaggagcagaggaggtctgccagccttggtcaagttaacaccatgctt
cgcaagcagttggagcaggcaagtgcggccaacagcagcctaatcgaaaggctacgcagg
gcccaggatgaggctgaccagaaagacatgcaactgcgccgggagcaagagacatgtgtg
tctcggctgagccgcaagcaagcccgcgtacgagctctgtggcgccagacagcctctctg
cggaactgcttcacccaactgagggcgtctgctgacaggagtctctcggatatgcgtata
gagtgtgtcgccgtcagccatcgcctatatgctgcttgcaagagccttgaggaccgcttg
tctctgcacagcgctcctaatggacaggaggtctcattgctggagaaacagttgaaagac
aagctgaaggaggccatgcagctgcaagctcactggggtgcagagaaagtggaactgaac
agcagaatcctggacttgacaagtactgtgatgcaactgcaagggaagatcacagaaaaa
gacagagatttgacctccctgaagagcactctagaaagaatggagaagagcaaagccaag
tgttgctctgagatggaggagctccggagagagatcagcaacttgcagcagacccttaac
agtgtcactcagttggcttgtggagacagcggtgcttctgaagatgctatagagggactg
gactcccatcatccttctcctacccatcagcaaagtagcccctgcctgtcttattctgac
agagcactcatggtggtacagaacaccctgtcccaatacaagctccaagtgcaggaactc
cacacgcagctggaaaacacccagaagcagatggccaccctgcacaggcagctgcaggag
ggagaggcagagcgcaaggacattatgcagcgggctgagcagctgcagcaggagagacag
cactcagagagggcctttgaggagagctacagggatgcccaggggtaccgttcatccctg
gatatcatggctagtgagaaaggggacttggagaagcttgttctcagcctcaaccagcag
atcgattcccagagggtcgagctggaggctctgagaagcggtgacctggaactccggcgc
caacaggacctcctgctacagcagcaggaggagctcaggagggagtcggagcactggcgt
gcagaggcagagaggagagagagcagtttggaacagcttgaggataagtattcaaactta
cggaaggagctgttggtcctaaaggagaatctgagccatgtcacactacagaaagaaatg
ctggaagatgagaaggccagtctaagtcagactatcagcaagattgagcaacaaaatgca
gagcaggtacttgctgtcacaaagatgcaaagcgaggaggcaaggctccgggattcactg
gccaaaatgggagccctcactgaagggttagccaaggataaagtggaactgaaccgcatg
ctgctgcaggtggagcgtgagaaggcagagttagtggaacgtaaaagggaggtggagctg
gcgcggacagcagccagagagaaggtcagccggttggagcaggagttgctggatatttct
gcagagaaacggactctggagtcctcccagaatcacctggtagagacccagcagagccaa
gaggaagaactgaggctcttgaagaaggagaaggcccaagcagtggagcagcatgcacag
gccagcagacagagacgtgccctgtcggagcagttggcactgagccggcaagagatggag
tgccaggctgcagcattgaacagagcggtccaggagagagaagcgttggccaaagacaag
gcctgcctggaggtccagctgagtgtggctgagcgcaatgccctggggctggcccaggag
ctcactgctctccgcaccagggctgagaaggaggctctagaaagtgctgtgttcgaggcc
caggagctgacgtcggtcctggagaaggaaggcgtgcagctcgacgccgagaaacagggc
ctgctgcaggctaaggaagccctgacacgtgagattgcgcggttacaaggagaactggaa
ctgcaggccatacgatgtgagcaggagcgaaagatgctggagggcaggatggcccaggca
gaggaagacgcccagctggccctgagcaacagtgaacgtagccaccgacagcagctggat
gctgagaaggagcagctgcgcacagagcttattgcgcagtcgaaggaggttgagcgccag
ctgcggcaggagtgtaaggagctgcgtgtgcagagccaggctgaacgggagcagctgcag
caggagctggtcaggttgcagaaggagctcaaagagagcctacgacaagccgagtaccac
aaacagcaggccctctccctgaaggaggtagagaaaactgccctaagtgagaagcttaca
acccttcaacaggagttggctgctgcaggcatggagatggaaaggttgcaaagaaacaca
ctgagccaacaagaacaagacaagaaaaccatctcagacttgaactcagaggtgcaggac
ttgcacctgcatcttgaggagttgcagagctcccaggaggaagcaatgcagaggctaagg
gtgcagatcaaggaagaggctcacagcagggagtctgcattgcagaaggcagaggcgttg
cagaagaagctccaggtggaggaggaggggcggaaggcaggccagcaggagcttcaggag
gcacaccgtgagctgcggaagtgtgtccaagagaaggatgcccaacagaacgaggtgctg
gatttgagacgggcactgggtgatgagattcaagataaggaggccttactgaactccaac
caggagctaagaagcttaatcaagaaagctgagagtgatcgtatcagtctgagacaagct
ctggaggagaaggagaagcaactattggtacttgaggatcgcaagtcctccctccagcag
gaggcagcagagctccgaagtagtctgcaaattctggagaggtctcggctacaggcgcgc
agagacatgcaggagctgcgcagacaggtgaagacattacaggaagaggttgggcagcgc
agccaagagttgcaagacctgcagtcgcgcctgtctcgggaagagctccaggaggaagct
tctcgtcgggaggctcttgccctcaaggagagggcactggagagtgaggctgccagggag
gcagcactgaaagaggtgacggggctgcacaactgcatcatggagctgcaagaagctaag
cgccattgtgaggaagagctgaaagtctcaaaggcaaagcttcgggagtctgagagaagg
cataaggaggatgtggagcggcttgaggggtctcttcaggatgcagcgctccagatgaga
gaggtcagcctgagggccagctcagctgaaggccgagtccaaggcctggaagagcagctg
ggcaagggagactctgtctgcagggagctggagaagaggctgacctgtttgtcctccatc
ctacgctgtaccctgggaattggttggagtggccgctgtcaggtccccaactccaaacgg
gaagcttctccaaataagggacgtgaatgtctggagaggagcaccacctcccctagccga
ggtaccggccggtccccggtgcactcagtacctactccacaagcagaaacatgggactcg
gagctggagagagtgcaggaagcactccgcaaattcctacaagaactgcgggatgctcag
aaagccaggaatgaagctcaagtgcaggtgcagaatctgtcccatcaactggaagaagtg
cagagtagcagggacaggatccaaaaccagcagcagctgctgcagaaagccctgaccaag
gtggaggaggacaagaaggaggcagttgatcgtctcaaggtgctgcagacatacctcgtt
gctcaggaggaggcacagcggcaagcggacaaggagcggcagcacctaaaggaggaggtg
gccatgctgaaatgccgtctgcaggcagctgaggctgatgcaagggcactgcaggagaag
ctggtgcaggcacaggccaccgagagcattctggatgctgagcgcgagaggctgaaagag
accctggaggcagcgaagggcagggcctcccagctggagctgcaccagcacagcctggac
ggggagctacagcggatacggactgtcgcagccgagaaggaagcagacgtgggtgcgctg
caggagcagttggcagcattgcagcgggagctgggggagagcaaggagaggtgtggcacc
ctgcgaacggatgctgagaggcaaggagcagcacttgcccgtgccgagagcagggagagc
aagctgcaggaccaactccagagcctatcagcctccctgaatgaggctagcgccagcgtc
ggggctctgcaggagcagaatgctcagctgcaaaagggcctggcagccagtgagcaggag
ggcagaaagctccaggaacacctggaaacaacacaggaggcgctctccaagtgtacgaat
cagaattatggacttgcggtacaagtccacaacctgcagaggtccctggaggagatggaa
gagaggagacatgagctggaggttcagacaaaggcacttcaggagaccctgaaacagagg
caggacaacgacaacgaaagatctcggcagctgcaggaagagaagaacagcctgcgggag
caggtgaccagcctgcagagctctctggagaggctgcagagtgagaggagccagctgggg
acggtcctggctcatttgggcaaagacaaggcctccctgaggaagatcttggacaaggtg
gagctggagaggctgcggctggaggaggagctggcacgtgtggctcgtgagagggaacgc
ctagagcaagagctgagcagcatgcgggcagaggtgcagcagctgcaggccaagatctcc
cagatggagcgggcacacccccagcacctcctagaggtggaggagcgccaccagcaggag
ttggaggtagagaccaggcacttgatggctgcccaacagcaggcggagcacgctctggag
gtccgggagaaggctcaccgacagagagtaacttgcctagaggaacaggtgtgcatactg
aaggaacaactggagcaggagatgcggaggaggcaggtctacgtcagccagatgatgcag
ccagagatgtag
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integrated database retrieval system