Scleropages formosus (Asian bonytongue): 108926184
Help
Entry
108926184 CDS
T04919
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04137
Mitophagy - animal
sfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108926184
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108926184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108926184
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108926184
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108926184
Multi subunit type E3
ERAD complex
108926184
LMBR1L-GP78-UBAC2 complex
108926184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_4
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
Holin_BhlA
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
108926184
NCBI-ProteinID:
XP_018594263
LinkDB
All DBs
Position
7:24857439..24864069
Genome browser
AA seq
612 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSAALLAGSVLSAYSTVTDPGLGLSEEAGEEELSGSGGGVA
SGVLSYLLYDSFFVWVLVNTACCFLMLVAKAIQCIVFGPLRVSEKQHLKDKFWNFIFYKF
IFIFGVLNVQTLEEVVMWCLWFAALIFLHLMVQLCKDRFEYLSFSPTTPRSSHVRVLSLL
VAVLVSCGSMAVLCGLVGVPHGLHTVAFMAAECLLVTVRTGHVIMRYTIHLWDLNHEGTW
ESKGTYVYYTDFIMELALLTLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIQ
RHKNYLRVIDNMESRFEVATPEELAANSDDCAICWDSMQAARKLPCGHLFHNSCLRSWLE
QDTSCPTCRMSLNINEGDQAQGERQREALEDNMGAVPGAEARPLHNQHNHFFHFDGSRIA
SWLPSFSVEVMHTTNILGMVQANNYQLNVMAHQIQEMFPQVPYHLVLQDLQLTRSMEITT
DNILEGRIQVPFTAPPSERPSVQESSTSDEPLEASGGTVDVSPGQVPDTEIRGNRFSKSA
AERQRMLLQRKEELLQQARRRYLSKSPEEDDDEDILTRLEDNSPGSDLASMRRLMLAAAA
ERRLHRPQDLSQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgccactacttttcctggagaggtttccctggcccagtctgcagacttacacagccttg
agtgccgccctgctcgccgggagcgtcctgagcgcctacagcacggtgacggatccgggg
ttggggctctcggaggaagcgggtgaagaggagctttccggctccggcggcggggtggct
tcaggtgtgctgtcctacctgctctacgacagcttcttcgtgtgggtgctggtgaacaca
gcttgttgtttcctcatgctggttgccaaggcgattcagtgtatagtgtttggaccactc
agggtcagtgaaaaacagcatctgaaggacaaattttggaacttcatcttctacaagttc
attttcatctttggagtgctgaatgtgcaaaccttggaggaggtggtcatgtggtgcctg
tggtttgctgcactcatcttcctccacctcatggttcagctctgcaaagaccgctttgaa
tatctgtctttctcacccaccacgccaaggagcagccatgtgcgtgtgctctcactgctg
gtggcagttttggtctcctgtggcagcatggcagtactctgtgggctggtgggggttccg
catggcctccacacagtggccttcatggctgcagagtgtctgctcgttactgtccgcact
ggccatgttatcatgcgctataccatccacctgtgggacctgaatcatgagggtacctgg
gagagcaaaggcacctatgtgtactacacagatttcatcatggagttggccttgctgacc
ctggacctaatgcaccatatccacatgctgctcttcggcaacatttggctgtctatggct
agcctggtgatcttcatgcagctccgctacctcttccacgaggttcagcggcgcatccaa
cgccacaagaactacctacgtgttatcgataacatggaatccaggtttgaggtggccacc
ccagaggagctggctgccaacagtgatgactgtgccatctgctgggattctatgcaggct
gcacgcaagcttccttgtggacatctctttcacaattcctgtctgcgatcctggctagaa
caggatacttcctgtcctacatgtcgcatgtctctgaacatcaacgagggtgaccaggct
cagggggagcggcagagagaggccctggaggacaacatgggcgctgtgcctggagcagaa
gcccgacctcttcacaatcagcacaaccacttcttccactttgatggatcccgcattgcc
agttggttgccaagtttttctgtggaggtcatgcacaccaccaacatcctgggaatggtt
caggccaacaattatcaactgaatgtcatggcacaccagatccaagagatgtttccccag
gtgccctatcacctagtgctgcaggacctacaactcacgcgctccatggagattactact
gataacatcctggagggtcgcatccaggtgcccttcactgcaccgcccagtgagcggccc
tccgtccaggagagctccacctcagatgagcctctggaggccagtggcgggacagtggat
gtctcaccaggccaagtgcctgacacagagatcaggggcaaccgcttctccaagtcagca
gcagagaggcaaaggatgctgctacagaggaaggaggaactgctgcagcaagcacgcagg
cggtacctgagcaagagccctgaggaagatgatgatgaagatatcttaaccaggctggag
gacaactcccctgggtcagacttggcttcaatgcgccgcctgatgctagctgccgctgca
gagcgccggctgcacaggccccaggacttgtcccagtga
DBGET
integrated database retrieval system
