Scleropages formosus (Asian bonytongue): 108926245
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Entry
108926245 CDS
T04919
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108926245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108926245
03036 Chromosome and associated proteins [BR:
sfm03036
]
108926245
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108926245
Coactivators
SAGA/TFTC/STAGA complex
108926245
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108926245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
108926245
NCBI-ProteinID:
XP_029109503
UniProt:
A0A8C9VP40
LinkDB
All DBs
Position
7:26033638..26099501
Genome browser
AA seq
1056 aa
AA seq
DB search
MAGTSDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSNPSAPHSDSRSTGSTGTANHHLGR
TLPAPPVDSVAEQQQQQQQQQQQQQQQQGHKAARTSEPNSREPATEKTPSSAGAAPPFGD
PSITSGSAVSASSSGLQPHGASNVTALCASAPGTLAPAPGSRGTVSGSAGTAGTAGTAAG
TVGAAAVSADSEPLNNHLAPAARTPSLNGDGGGLVTLGDSPPSAAAPAESPAPRPAAAAP
PGAHRTPTIALQRLPGHILATIAQNGTGTIMSTLVPQSTRTVPRSAEPAHAKPDSSGPSK
AVIPSAPGAATAATTVTTVTSATAATVATPPAAPQNPPPQKVPVSSASPAVSSPAAAKPS
APGPPLVSTTVGVVRPGTPAPSLAVATPTQPTQPTPLRPGLSSTQRIVTPQLIVRPPQQQ
TTIQLPPGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQAQAQAQAQAQAQSQGHNSISP
RPVTPTTGATFRMATTQVQSPVSSQAIRPCPPVQARIAHPPAPAASPALQKASVTGGPVA
APQQPPTVITGGQSAPQAQPQPAPQPAPPAQTTTPAVPASPGPGAPVVSQEMQENVKKCK
NFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFL
KKSLPALRLSLLSSQQSLTQPPPQVKPAPGVPLAGASTVPTIVAGPTVRVRQPNSGTLPA
VLPGAAHGNTATLGIKRAVTQGAQVGMPMVVTQTVRAPGVVGKGPAIPATKSPVGMAAQV
SANVKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAF
LPVGLLHRRILETAKKFGVTEVPVEAVTFISHATQARLRSVLEKVSTIAQHRMETCKDDE
WYEQSTDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQ
QQELAQMRQREANLTALAAIGPRKKRKLDSPTVLLTGTEVPGSSTGLPAGCSTPSASSRQ
YARQRITRVNLRDLIFYMEQERETARSLLLYRALLK
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtacctccgaccctctggaagatatgctcttctccgaggtggatgagaaggct
gtgagcgacttggtgggatcgctggagtcgcagcttgtcggccagagcaatccgtcagct
ccccattcggattcccggagcactgggtccacaggcaccgccaatcatcacttgggcagg
acgctacctgctccaccggtggacagtgtagcggagcagcagcagcagcagcagcagcaa
cagcagcagcagcaacaacaacaaggacataaagctgcgagaacgtcggagcccaactcg
agagaacccgccacagaaaagacgccgagctccgccggcgccgctccgcctttcggagac
ccttccatcacttcgggctccgcggtcagcgctagcagcagcggtttgcagccacatgga
gcatctaacgtgacagcgctgtgcgcgtccgctccgggaactttggctcctgcgccgggc
agccgggggaccgtgtcggggtcagcggggacagcggggacagcggggaccgcggcgggg
acagtgggggcagcggccgtgtctgcggacagcgagcccctgaataaccacctcgctccg
gccgccaggactccgagtctgaacggggacggtggcgggctggtcacgctgggggactcc
cctccgagcgccgcggctccggccgagtcgcctgcccctcggcccgccgccgctgccccc
ccgggcgcccacaggacccccaccatcgccctgcagcggctgcccggccacatcctggcc
acgatcgcgcagaacggcacgggaaccatcatgtccacgctggtcccgcagagcacacgg
acggtccctcggagcgcggaacccgcccacgccaagccggactccagcggaccgagcaag
gcggtgatcccgagcgctccgggcgcggccaccgcggccaccacggtcaccacggtcacc
tcggccaccgctgccaccgttgccacccctccagctgccccgcagaacccgcccccgcag
aaggttcccgtgtccagcgcatctcccgcagtctcgagccccgcggcggcgaaaccgagc
gcgccgggacccccgctggtcagcaccaccgtaggggtcgtgaggccggggactcccgct
ccttccctcgccgtggccacgcccacgcaacccacgcagcccacgccgctccggcccgga
ctgagctccactcagaggatcgtgaccccgcagttgatagttagacccccccagcagcag
accaccattcagcttcccccgggcttcaccatcccacccggcatggtgctggtgcgcacg
gagatggggcagctggtgatggttcctcagcaggccctggcccaggcccaagctcaagcc
caagctcaagcccaagctcaagctcaagcccagagccagggtcacaacagcatctctcca
agacccgtgaccccgaccacaggagcaaccttcagaatggccaccacgcaggtacagtct
cctgtgagctcccaggccatccgaccatgtccaccggtccaggccaggatagcgcacccc
cccgctcccgccgccagccccgccctccagaaggcatctgtgactgggggacccgtggca
gctccacagcagccccctacggtcatcacaggggggcagagcgccccccaggcccagccg
cagccggccccccagccggccccgcccgcccagaccaccactccggctgtccccgcgagt
ccgggccccggggcccctgtggtctcccaggagatgcaagaaaatgtgaaaaagtgcaag
aacttcctggccaccctgatcaagctggcatcccacaactcgccctctccagaaacttcg
aaaaacgtcaaagcgttggtccaggatctattggacgccaagattgaacctgaagaattc
accagtcgtctgcagacggagctgaagtcctccccccagccgtacctcgttccctttctc
aagaaaagcctacctgccttgcgactgtcactgctcagcagccagcagtccttgacacag
ccacccccgcaggtgaagcctgccccgggggtgccgctggcaggtgccagcaccgtgccc
accattgtggccggacccaccgtgagggtgcgccagcccaacagtggcacgctgcccgct
gtcctgcctggggctgcccacggaaacacagcaaccctgggaatcaagagagcagtcact
cagggggcgcaggtcggaatgcccatggtggtcacacagactgtgcgagcgccaggcgta
gttgggaagggaccagcaataccagcaacaaaaagtcccgtgggcatggctgctcaggtc
tccgcaaatgtgaaaaataagctgaacgaccccggaggcggttctttcagggacgatgac
gacatcaatgacgtggcgtccatggctggggtgaacctgaacgaagagagcgcccgcatc
ctggccaccaactccgagctggtgggaacgcagatccgctcctgcaaggacgaggccttc
ctgccggtgggactcctccaccggcgcatcctggagacagctaagaagtttggggtgacg
gaggtcccagtggaggccgtcaccttcatctctcatgccacccaggccagattacggagc
gtgctggagaaggtgtccaccatcgcccagcacagaatggagacgtgtaaagacgacgag
tggtacgagcagtcaacggacgtgcggtcgcagctgaagttctttgagcagctcgagagg
ctggagaagcaaaggaaggatgagcaggagcgagagatcctgctgaaagctgcaaaaagt
cgctcgaggcaagaggacccagagcaagctcggctgaaacaaaaagctaaggagatgcag
cagcaggagctggcacagatgaggcagcgggaagccaacctcacggcactggctgccatc
gggccacggaagaagcgcaagctggactcccccacggtgttgttaacagggactgaggtc
ccggggagttcgacgggcttgccggccggctgctccaccccgagcgcctcctcccgccag
tacgcccggcagcgcatcacccgcgtcaacctcagggacttgatcttctacatggagcag
gagcgggagacggcccgctctctactgctctaccgcgccctgctcaagtag
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integrated database retrieval system
