Scleropages formosus (Asian bonytongue): 108926488
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Entry
108926488 CDS
T04919
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108926488 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108926488 (hspd1)
03110 Chaperones and folding catalysts [BR:
sfm03110
]
108926488 (hspd1)
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108926488 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108926488 (hspd1)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108926488 (hspd1)
Messenger RNA biogenesis [BR:
sfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108926488 (hspd1)
Chaperones and folding catalysts [BR:
sfm03110
]
Heat shock proteins
HSP60 / Chaperonin
108926488 (hspd1)
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108926488 (hspd1)
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108926488 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
108926488 (hspd1)
Exosomal proteins of breast cancer cells
108926488 (hspd1)
Exosomal proteins of colorectal cancer cells
108926488 (hspd1)
Exosomal proteins of bladder cancer cells
108926488 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
108926488
NCBI-ProteinID:
XP_018594704
UniProt:
A0A8C9VKQ5
LinkDB
All DBs
Position
1:27537279..27543836
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AA seq
573 aa
AA seq
DB search
MFRLPSVMRQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMQAVETVISELKKLSKPVTTPEEIAQVATISANGDF
EIGSIISDAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLQDMAVATGGTVFGDEALGLAVEDIQAHHFGRVGEVLVTKDDTMLLKG
SGDPAAIEKRVAEISEQLESTTSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDNIKPLNSDQKIGIDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQSGSEIGYDALQGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEAAMPGGMGGMGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtttgcccagtgtaatgagacaggtgcgaccagtgtgcagggcactggccccc
cacctcacccgtgcctatgctaaggatgttaaatttggagcagatgcccgtgcccttatg
ctgcagggtgtggaccttttggctgatgctgttgctgtcaccatggggcccaagggccgc
acagtcatcatcgaacagagctggggtagccccaaggttactaaggatggtgtgaccgta
gccaagagcattgacctcaaggacaaatacaagaacatcggtgccaaactggttcaggat
gtagctaacaacacaaatgaagaggctggggatggtaccactaccgctacagtgctggca
cgggccattgcaaaggagggctttgataccattagcaagggtgccaaccctgtggagatc
aggcgtggtgtcatgcaggctgtagagactgtcatcagtgagctcaagaaactctccaag
cctgtcaccactcctgaggagattgcgcaggtggccactatttctgcaaacggtgacttt
gagattggtagcattatttctgatgccatgaagaaagttggccgcaagggggtgatcacc
gtaaaggatggcaaaaccctgcatgatgagctggaaatcattgagggcctgaagtttgac
cgtgggtacatctccccttacttcatcaacacagccaaaggtcagaaatgtgaattccag
gatgcctatctgcttttaagtgagaaaaagatctccagtgtacagagcattgtccctgcc
cttgagattgccaaccagcaccggaaacccctagtcattgtggcagaggatgtggatgga
gaagccctcagcaccctggtgctcaacaggctgaaggttgggctacaggttgtcgcagta
aaggcccctggttttggagacaacagaaagaaccaactacaggacatggctgttgctact
gggggcactgtatttggtgatgaagcactgggccttgcagtggaggatatccaggcacat
cactttggaagggtgggtgaggtgctggtgaccaaggatgacaccatgctgctgaaaggc
agtggggacccagctgccattgagaagcgggtggcggagatcagtgagcagcttgagagc
accaccagtgactatgagaaggagaagttgaatgagcggctggccaagctgtctgatggt
gtagctgttataaaggtgggaggcacaagtgatgtggaagtgaatgagaaaaaggaccgc
gtaacagatgctctgaatgcaacacgagcggcagtcgaagagggtattgtacctggcgga
ggctgtgctctgctgcgctgtatccctgcacttgacaacatcaaacccctcaattctgac
cagaagattgggattgacatcattcgccgtgctttgcgcatcccagcaatgaccattgcc
aaaaacgcaggggttgagggctctttggtggtagagaagatcctgcagagtgggtcagaa
attggctatgatgcactgcagggcgagtatgtcaacatggtggagaagggcatcattgac
cccactaaggttgtcaggacagctttgctggatgcagcaggtgtggcatcccttctctct
actgcagaagctgttgttacggagattcccaaggaggaaaaagaagccgccatgcctggt
ggcatggggggcatgggtggcatgggtgggggcatgttctaa
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