Scleropages formosus (Asian bonytongue): 108926535
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Entry
108926535 CDS
T04919
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108926535 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfm03009
]
108926535 (utp4)
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108926535 (utp4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Ge1_WD40
Gmad1
Lactonase
Motif
Other DBs
NCBI-GeneID:
108926535
NCBI-ProteinID:
XP_018594780
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Position
7:17865384..17877012
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AA seq
684 aa
AA seq
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MGEFKVHRVRFFGYMPSGIRCMSFNERAERLALGRLDGTLEIFNFKDSFYQEKVIPGNDS
RSVEAVCWVAERLFTAGLNGEITEYDLENLCPKYSLDAFGGPIWTVACNAQGTHLAVGCE
DGSIKLFEILPEKIRFERNLDRQKGRVLSLSWHESGTRIAAGMLDMIRIFDVQSGHATHR
MLVDRGVSGMRNHECVVWCVAFLSDLTVISTDSSGKVQVWNAAMGILSSTHLVSKSDVLS
LAVSKDESSFVVGTSEGTVVQFQFLANILGGDEKAWVRTKTFKPHTHDVRALAEIGTAVV
SGGLDTQLVVRPLLDKVDIMSYDNVLHKIHFPHRSLVSCAQKAGMLLFQFPAQLEVWRLG
ESEGRGKPGDTLFVKKNPEKLLQLKRKGEDHISCSAISPCGGWLAYSTVSSLRVYRLQCD
EHVSISKVPKLPKVLRSAHQLSFSDDSSKLFAASTHSMVHVISLSQSECKHLHTFKPKSG
STEPVHLLAASKDGKWLAAANRGCEIHIYNLHKLKPHCTVPIYGSCPTAMGIHPTSNNLL
MVHADRQIFEYSIVEKQYTDWSRRVQREGLHKLWLERDTPVTHVTFNPRNAAQFMLHDTY
MFCIIDQSLPLPDNKCQFYNQITLKSLSEQERLSHAHAFKMCTKYQHLLFLGLLDDESLV
VVQRPLTDIASQLPAPVRLKKFAT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcaaggtgcaccgcgtccgcttcttcggctacatgccctctgggatccga
tgcatgtcgttcaatgagcgggcagagagactggctctaggcaggctggatggcactctg
gagatattcaacttcaaggacagcttctaccaggaaaaggtgattccaggcaatgattcg
cggtctgttgaagcagtttgctgggttgcagagcgactctttactgctggcctcaatggg
gaaataacggagtacgatctggagaacctctgtccaaagtactctttggatgcatttggg
ggacccatatggacagtagcttgcaatgcccaggggacacatttagcggttggatgtgaa
gatggatccataaaattatttgaaatcctcccagagaagatccgattcgagagaaatctg
gacagacagaaagggcgtgttctctctctgtcatggcacgagtcgggcacgaggattgcg
gcagggatgctcgacatgatccgaatttttgacgttcagtcagggcatgcgacgcacagg
atgttggttgaccggggtgtgtcgggcatgcgcaaccacgagtgtgtggtgtggtgcgtg
gccttcctgtcagatctcactgttatcagcaccgattcatctgggaaagttcaggtgtgg
aatgcagccatgggaatcctcagcagtactcacctggtctccaaatcggacgtgctctcg
ctggctgtctcaaaggatgagagcagctttgtggtgggcacgtccgaaggcactgtggtg
cagttccagttcctggccaacattctcggtggtgatgagaaagcgtgggtcagaaccaag
acgtttaagcctcacacccacgacgtgcgtgcgctggctgagattggcacggccgtagtg
tcaggaggtttggacacacagttagtggtgcggcccctcttggacaaggtggacatcatg
tcctacgacaatgtgcttcacaagatccactttccccatcggagcttggtatcatgtgcc
caaaaggcaggaatgctgctgttccaattccctgcccagctggaagtgtggaggctggga
gagagcgaaggccgtggaaagcctggcgacactttgttcgtgaagaaaaatccagagaaa
cttctgcagctgaagagaaagggtgaagaccacatcagctgtagcgccatttctccctgt
ggggggtggttggcctactccaccgtttccagccttcgagtctaccggctgcagtgcgac
gaacacgttagcatctccaaggtacccaagctgccaaaggttctgcgctctgcccaccag
ctctccttctcagatgattcgtccaagctgttcgcagcctccacccactccatggttcac
gtgatttctctcagccagtcggagtgcaagcatctgcacacgttcaagcccaagtcaggg
tccacagagcctgttcacctgctggctgccagtaaagatgggaagtggctggctgcagct
aataggggctgtgagatccacatatacaacttgcacaaactgaagcctcactgcacggtg
ccaatatatggctcctgccccactgcaatgggaatccatcccacctccaataacctgctg
atggttcatgcagaccggcagatctttgagtacagcatagtggagaagcagtacacagac
tggagccgccgagtacagagggagggtctccacaagttgtggttggagagggacacgcct
gtcacccatgtgaccttcaaccctcgtaatgcagcccagttcatgctgcatgacacctac
atgttctgcatcattgaccaaagcttgccactccctgacaacaagtgtcagttctacaat
cagataaccctgaaaagcctgtcagaacaagaaagactcagccatgctcatgccttcaag
atgtgcacaaagtaccaacatctcctttttttgggcctgctggacgacgaatctctggtt
gtggtacagcgccccctcacggacattgcctcccagttgccggcaccagtaaggctgaag
aagttcgccacataa
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