Scleropages formosus (Asian bonytongue): 108926641
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Entry
108926641 CDS
T04919
Symbol
zc3h18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108926641 (zc3h18)
Spliceosome [BR:
sfm03041
]
Common components
Common spliceosomal components
General mRNP proteins
108926641 (zc3h18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108926641
NCBI-ProteinID:
XP_018594990
LinkDB
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Position
7:17777065..17805380
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AA seq
1118 aa
AA seq
DB search
MDTPESPAQSPQSPEEEEKEISDSELLNDSDPDGNEEGAGDSELGDLEEDLEEGIQERVS
DQEEYEELAEGDENNLEQEKRAEGPAVYREVSHSVDEEEEEEDRVSRGPGYCDFEAEPEK
LLAMAEEDEEDDGRGHQEEDEEEDNGLKPTEVTRGPGRDEDARRVVNDMKDESSSVSREL
DEHELDYDEEVPEEQSAPPPEDEEVEKGPGEEEEEDDEDDDDKRRKKKENKNLVMPPEKD
PQPKNAEEPRVLEKGRRELSRDKKKEEDDGEIDEGEIDDDDLEEGEVKDPMDRKIRPRPI
CRFFMKGNCTWGMNCRFIHPGVNDKGNYSLITKPDPFSPNGGPPGGPHPLMPSNPWAAPA
VEELPPPPPVAEPPMESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFNVTIGEDERDFD
KENDFFRERNYRITREIRDPGDLEYRDPLYGSDPYADPYYDYEMETFWRGGQYENFRVHY
TETPLPYHYNERERDPRERQRERDRERERDHRERERRQREREREREREREKERQRRKEEW
ERDRMKRDEKERPRERPPREPREKKEDKDKPKPRSPIAPATRALEPPAKKELGPLVKRPD
EWKDPWRRSKSPRRRVGVAGSPLRGRRRHRPSGSSVSLSNSSRSSSRSSSYTGSGSSRSR
SRSSSFSSYSSHSSQHSSFSGSRSRSRSFSSSPSPSPTRATQRNASKIKAELLPPTVKGE
KAITKKPPTPPPQAHLGKTPKPPAEAVKPTTPRESGKPINPREGGKLVNPREGGALGIPR
EGRHKERQQHNPPRRRTVSGSMSGSASSYSGSSSRSRSPSGSRTHSSSPSMSRSRSGSRK
SRKSRSLSVSSVSSVSSASSSSSSMRSADSEDMYADLASPVSSASSRSPTPAKARRDKGL
PRDKGPSKDKGKPAKKEEQFKEDRRKQDPLAPPARAPATSSSLKSGPSGKSHQLHASAMG
PPGAYGSHKDIKLTLLNKQQTDRGNRKRYLPSDKERPTSPFSKRIALSPERGRERRMLGR
PPLSPRMERPRGQGPRPMLLPPDSRKRPLSPPSKSSGKSPGVSSSKIPSAGSTSASGVPL
PPKSGKPSSTLSRREELLKQLKAVEDAIARKRAKIPGK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggatacccctgaaagccccgcacaatcgccacagtcgccggaggaggaggagaaggag
atctccgacagcgagctgctcaatgactctgatcctgatgggaacgaagaaggggctgga
gactcggagttgggggacctggaagaggatttggaggaaggaatccaggagcgagtttct
gaccaggaggagtacgaggagcttgctgaaggtgatgagaacaatttagaacaagagaag
agggcagaggggcctgctgtctacagggaggtcagccattctgttgacgaagaggaggaa
gaggaagacagagtcagcagaggtccaggttactgtgactttgaagccgaacctgagaag
ttgctggctatggctgaagaagatgaggaagatgatggcagagggcaccaagaggaagat
gaagaggaagacaatgggttgaagccgaccgaggtgacacgaggaccaggtagggatgag
gatgcgaggcgggtggttaatgacatgaaggacgagtcctcatctgtgtcacgtgagcta
gatgagcatgagttggactacgatgaggaggtgcccgaggagcagagcgcccctcccccc
gaggatgaggaggtagagaaggggccaggagaggaggaagaggaagatgatgaagatgat
gatgacaaacggagaaagaagaaggaaaacaagaatctggtcatgccacctgagaaggac
cctcagcccaagaatgctgaagagccaagggttctggagaaaggccggcgcgagctgagt
cgtgataagaagaaggaagaagatgatggggaaatcgatgaaggagagatagacgatgat
gaccttgaagagggggaggttaaggaccccatggacaggaagatccgtccccgtcctatt
tgcaggtttttcatgaaaggcaactgtacctggggtatgaattgcagatttatacaccct
ggagtcaatgacaagggcaattactctctcatcacgaagccagaccccttctctccaaat
ggggggccacctggaggccctcaccctctgatgccttcaaacccctgggcggcaccagct
gttgaggaactgcctccaccacccccagtggctgaacctcccatggaaagtgcatgggaa
aggggtctccgacatgccaaagaggtgctgaagaaggccactatacgcaaggagcaggag
cctgactttgaggagaaaagattcaacgtgaccatcggggaggatgagcgtgattttgac
aaagagaatgatttcttcagggagcgcaactaccgcatcactagagagattagagacccg
ggtgacctggaatacagagacccactttatggtagtgacccctatgcagacccatactat
gattacgagatggagaccttctggagaggggggcaatacgagaatttcagagtgcactat
acagagacaccccttccgtaccactacaacgagcgtgaacgggatccccgagagcggcag
cgcgagcgtgaccgagagcgcgagcgggatcatcgtgagcgggagcgccggcagcgggaa
cgtgaacgggagagagagcgcgagcgggagaaggagcgccaacggcggaaagaagagtgg
gaaagagaccgcatgaagcgggatgaaaaggagagaccccgggagcgcccacctcgggag
ccgcgggaaaagaaggaggacaaagacaaacccaagcccagatcacccatcgctccagcc
actagggcactggaaccccctgcaaagaaagagcttggacccctagtgaagcgaccagat
gagtggaaggacccatggcgcaggtccaagtccccccggaggcgtgtgggagtggctgga
tcacccctgcgtggccgccggcgacacaggccatctgggtcttcagtgtccctttccaat
tcatccaggtcctcttcccgctcatcttcctacacgggatccggctcttccaggtcacgg
tcacgctcttcttctttcagctcctactccagccactcctctcagcacagctctttctcg
ggaagcaggtccagatcaagatctttctcctcttccccctcaccttctcccactcgagcc
acccagagaaatgcctccaagattaaggcagagttgctccctccaacagtaaaaggggag
aaggccatcaccaagaagccacccacaccccctccccaggcccaccttggaaagaccccc
aagcctcctgctgaagcggtcaaacccacaaccccacgagagagtggcaaacctatcaat
cctcgggagggggggaagctagtcaacccccgagaggggggtgcacttggaattcctcgg
gaaggtcgtcacaaggaaaggcagcagcacaatcccccacggaggcgaacagtgagtggc
agcatgagtggcagtgccagcagctactcggggtccagctcccggtcacgctccccatca
ggctctcgcacacactcctcctcaccctctatgtcacggtcacgttcagggtccaggaag
tccagaaaatccaggtccctgagtgtaagcagtgtatcctccgtctcctctgcctcctcc
agcagtagctccatgcgaagtgctgactcagaggacatgtatgctgacctggccagccca
gtgtcatctgccagctcacgctctcccactcctgccaaggcccgccgagacaagggcctg
ccacgggacaagggtcccagcaaggacaaagggaagccagcaaagaaggaagagcagttc
aaagaggaccgcaggaagcaggaccctttagctccacctgcacgagcacccgccacatca
tcctcgctgaagtctggccccagcggcaagagccatcagctgcatgcatctgccatgggg
ccaccgggggcttatggctcccacaaagacatcaaactcactctgctcaacaagcagcaa
acagacagaggtaacaggaagcgatacctgccttctgacaaggagcggccaacatctcca
ttcagcaaaaggatagctctgtcacctgagaggggtcgtgaacgcaggatgcttggaaga
cctcctctgtctccacggatggagagaccccgaggccagggcccgcgacccatgctcctt
ccaccagacagtaggaaacgacccttatctccaccatccaaatcctctggtaaaagcccg
ggggtgtcatcaagcaagattccgagtgcaggctctacctctgcctctggtgtgccattg
ccccctaagtcagggaagccaagcagcacgttgtctcgccgggaggaactgctgaaacag
ctaaaggctgtggaagatgccattgctcgcaagcgagctaagatcccagggaaatag
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