Scleropages formosus (Asian bonytongue): 108926680
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Entry
108926680 CDS
T04919
Symbol
ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108926680 (ppfibp1)
Membrane trafficking [BR:
sfm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108926680 (ppfibp1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
DUF4845
Motif
Other DBs
NCBI-GeneID:
108926680
NCBI-ProteinID:
XP_029107663
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Position
5:3026047..3067420
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AA seq
969 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGIFDCQSPTSPFMGGLRVLHLAEDLRASLE
MLPTDEKEGLRCQIPDSTVDYLLEWLQGHLTNGHISVGGDVYQERLARLEGDKESLILQV
SVLTDQVEAQGEKIRDLDLCLEEHREKLNATEEMLQQELLSRTALETQKLTLMAEVSNLK
LKLTAMEKEHMDFDRFRGSEEMIQEISDLRYRVKEMEDERLQYEKKLKSTKDELVVLKRQ
LENRDMELERLQNETQLWARTPEGKEGAEKVSPTEESYKKKLKEKYFEVQKMKKAVESLM
AVNEEKDRKIEELRQSLNRYKKVQDMVMSVQGKKEKLKDGDSDESYSDTSVSISAVSVAM
DLERLAQPGFEDKARKSPEEQRPDLLHGSSSLSKALSESDRVHKEGPMLDSDDVAAEVSV
IQESPLCESPVSEDLTKRGSMDNLDNTEKKSGPDQQKAGENKSYEEVSKMSTLPPKSPTP
ADDDSFGTRKARSSFGRGFFKIKGGKRTASAPNLAETEREGTEHLDLAVMPSRLTESDST
HTLPSSPESKKKSRGIKKFFGKLRRSQSTTFNPDDELPEAEFKRGGVRATAGPRLGWSRD
LQHVKNELDTPFARWTKEQVCSWLQEQGLGMYTAQARQWIVSGQTLLQASQQDLEKELGI
KHPLHRKKLQLALQSLGSEEDDNKGKLDYTWVARWLDDIGLPQYKTQFDEARVDGRMLHY
MTVDDLLSLKVGSVLHHLSIKRAIQVLRLNHFEPNCLRRRPSDENNITPAEISQWTNHRV
MEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPTKTLLRRHLATHFNL
LIGSEAQQLKQECLEGPDYTLLTATAKVKPRKLSFGNFGSLRKKRQDDNEEYVCPMDVEM
PKGSSFLRGHRLYDDELDRLEQMEDSEGTVRQIGAFSEGINNLTSMLKDDEFFSELSACS
PDGLTDADS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacgctagtgatatgttggcagcagccttggaacaaatggatggcatcata
gcaggttccaaggctctggactactccaatggcatttttgactgccagtccccaacatca
ccgttcatgggtggcctccgggtgctgcacttggcagaggacctacgggcatctctggag
atgttgcctaccgacgagaaggaaggacttcgctgccagatccccgactctaccgtcgat
tacctgctggagtggctgcagggacacctgacaaatggtcacatctctgttggtggtgac
gtatatcaggaaaggcttgctcgactcgagggtgacaaggagtcccttattttgcaagtg
agcgtcttgacagaccaggttgaagcacaaggggaaaagattcgagatctggatctgtgc
cttgaggagcatcgggagaagctgaacgcaacagaggaaatgctacaacaggaactgtta
agtcgaacggcactggagacacagaagttgaccctgatggctgaggtctccaacctgaag
ctgaagctcactgccatggagaaggagcacatggacttcgataggttcaggggcagtgag
gaaatgatccaggagatcagtgacttgaggtaccgagtaaaagagatggaggatgaaaga
ctgcagtatgagaagaagctgaaatccaccaaggatgagctggtcgtactcaagaggcag
ctggagaacagagacatggagctggaaaggctgcagaacgagacgcagctctgggcccga
actccggaaggcaaagaaggtgcggagaaagtctcccccacagaggagtcttataaaaag
aagctgaaagagaaatacttcgaagtacaaaaaatgaagaaggcagtagagtcattgatg
gctgtaaatgaagagaaggatcgtaaaattgaagagctgcggcagtcactcaaccgctat
aagaaggtccaggacatggtgatgtctgtgcagggaaagaaagaaaaactgaaagatgga
gacagcgatgaaagctacagtgacacatctgtgtcgatatctgctgtgtccgttgctatg
gatttggaacggttggcccagcccggttttgaggacaaggcaaggaaaagcccagaggag
cagcgtcccgacctccttcatggctcctccagcctgtccaaggcgctctctgaatctgac
agagtacacaaagaaggcccgatgcttgacagtgatgatgttgctgcagaagtgtctgtt
atccaggaatctcctctgtgtgaaagtccagtgtctgaagatcttaccaaaagaggcagc
atggacaacttggacaacactgaaaagaagtctggtccagaccagcagaaggcaggggag
aacaagtcctatgaggaggtgagcaagatgagcacccttccgccaaaatcccccacgccc
gctgatgacgacagcttcggtaccaggaaggcccgctcgtcatttggtcgcggcttcttc
aagatcaaaggtggcaagaggacagcgagtgcaccaaacctggcagaaaccgaacgggag
ggcacagagcatttggacctggcagtgatgccgtcccgcttgacagagagcgacagcacc
cacacgctgccctcctccccagaaagcaagaagaagtccaggggaatcaagaagttcttt
ggaaagttgaggagaagtcagtcgacgaccttcaatccagatgacgaattgccggaggcg
gaattcaagaggggtggcgtgagggccacagcgggtccccgactcggctggtcacgtgac
ctgcagcatgtcaaaaatgagttggacacaccctttgccaggtggacgaaggagcaggtg
tgttcgtggctgcaggaacagggccttggcatgtacacggcccaggccaggcagtggatt
gtgtcaggccagacactgctacaggcttcccagcaggacctagagaaggagttgggcatc
aagcatcccctccataggaagaagctgcaacttgccttgcaatcattgggctctgaagag
gatgacaacaagggaaagctggattatacctgggtggccaggtggttggatgacatcggc
ctgccccagtacaaaacccagtttgatgaagccagagtcgatgggcgtatgcttcactac
atgactgtggatgacctgctgtccttgaaagtgggcagtgtcctccaccacttgagcatc
aagcgagctatccaggtgctccgtctcaaccattttgagcctaactgccttcgccgacgg
ccatctgatgagaacaacatcaccccagcggagatctctcagtggaccaaccaccgggtc
atggagtggttgcggtctgtagacttggctgagtatgcacccaacctgagggggagtgga
gtgcatggaggattaatggtgttggagccccgtttcaatgttgaaaccatggcgctgctg
ctcaacatcccgcccactaaaaccttgctgcgccgtcacttggccactcatttcaacctg
ctcatcggctccgaggcccagcagctgaagcaggagtgtctggaaggtcccgattacacg
ctgctgaccgccaccgccaaggtcaagcccaggaagctgtcctttggaaacttcggcagt
ctgcgcaagaaaaggcaggacgacaatgaggagtatgtctgccccatggatgtggaaatg
cccaagggcagcagcttcctgaggggccatcgtctctacgacgacgagctggaccggctg
gagcagatggaagactctgaaggaacagtgaggcaaattggggctttctccgaaggcatt
aacaacctgacgagcatgctgaaggacgatgagttcttcagtgagctgtcggcatgctct
cccgacgggctgaccgacgccgactcctga
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