Scleropages formosus (Asian bonytongue): 108926801
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Entry
108926801 CDS
T04919
Name
(RefSeq) thyroid hormone receptor alpha-like isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04080
Neuroactive ligand-receptor interaction
sfm04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108926801
04081 Hormone signaling
108926801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108926801
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfm03310
]
108926801
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108926801
Nuclear receptors [BR:
sfm03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
108926801
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108926801
NCBI-ProteinID:
XP_018595266
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Position
7:complement(28725100..28867770)
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AA seq
416 aa
AA seq
DB search
MEHMHKEQDPNISEGEEKRWLDCPKRKRKNSQCSVKSMSVLSLSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRFKK
CIAVGMAMDLVLDESKRVAKRRLIEENRERRKKEEMVKTLQNRPEPTSSEWELIRMVTDA
HRHTNAQGSHWKQKRKFLPEDIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCVEKIEKCQEMYLLAFEHYIN
YRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcacaaagagcaagaccctaacatctcagagggcgaagagaaaaggtgg
ctcgattgcccgaagaggaagaggaaaaacagccaatgttcagtgaagagtatgtctgtg
ctgagcctctctgttccagggtacatccccagctacctggagaaggatgagccctgtgtg
gtgtgtggagacaaggccactggataccactaccgatgcatcacctgtgagggctgcaag
ggtttcttccgacgtactatccagaaaaacctccacccctcttactcctgcaagtatgac
agctgctgcatcattgacaagatcactcgcaatcagtgccagctgtgtcgcttcaagaag
tgcattgctgtgggcatggccatggacttggttctggacgaatcaaagagggtggccaag
cgacgtctgatcgaggagaaccgagagcggcggaagaaggaggagatggtgaagaccttg
cagaaccggcctgagcccacaagctctgagtgggagcttatccgcatggtgactgacgcc
catcgccatacgaatgcccagggttcccactggaaacagaagcgcaagttcctgccagaa
gacattggccagtctccagtggcacccacatcagatggggacaaggtggacctggaggca
tttagcgagttcaccaagatcatcactcctgccatcacccgtgtggttgactttgccaaa
aaactacctatgttctctgagctgccttgtgaagatcagatcatcctgctgaagggctgc
tgcatggagatcatgtcactgagggcagctgtgcgttatgaccctgagagcgagacgctc
actctgagcggagagatggccgtcaagcgagagcagctgaagaatggtggtctgggagtg
gtgtcagatgccatcttcgacctgggaaagagcctggcacagttcaatctggacgacacg
gaggtggcactattacaagctgtgctgctcatgagctctgaccgctctggcctcacctgc
gtagagaagatagagaagtgccaggagatgtacctgctggcctttgaacactacatcaac
taccggaagcacaacattccccatttctggccaaagctgctgatgaaggtgacggacctg
cgcatgattggggcctgccacgccagtcgtttcctgcacatgaaggtggaatgtcctacc
gaactgtttcccccattattcctggaggttttcgaggaccaggaggtctga
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