Scleropages formosus (Asian bonytongue): 108926866
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Entry
108926866 CDS
T04919
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108926866
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108926866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Omega-toxin
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
108926866
NCBI-ProteinID:
XP_018595349
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All DBs
Position
14:26438189..26455583
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AA seq
804 aa
AA seq
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MGLKDHLEEDVGHILDLGLDLNYLHVESMDRPPGASALAAVVVEKTGAQGGGGGGGGGGD
LSAGESEESAGSDGEAERARPAATPPPPPSETPAEDEPERRDATQEYRAKVEFALKLGYS
EELVRLVLSKLGAEALINDVLGELVKLGGRAEPETPGPPAPPLPPSSSGSSSSSSSVSSP
SGVYRRGSGCQRPDSPLGPADDAENLRPIVLDGSNVAMSHGNKEVFSCRGIQLAVDWFRD
RGHKDVTVFVPAWRKEQSRPDAPITDQEILRRLEKEKVLVFTPSRRVQGRRVVCYDDRFI
VKLAHESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLD
NFLRKWPMFPEQRKQPCPYGKKCTYGHKCKFHHPERGPQPQRSVADELRASARSSRGLGE
AGLVKSHSAPCPPRPEGKRPAPKRQSEPALRTYSCGDLEDRSEGGAEAEGGRRSSAPPPA
PSIASSLCGHAQDAKGHAHVGAAPFSYPELYSRCGSPDLSYYSVINGCSALSLSAEPLDP
RGASEASDCSSEGSVSGGSSCDSYGCVVSPEDGHKCRHSRRPPYPAYLRPHPHPNPHPHP
HVYHGYPESVARVQSFGLDDSLPCLPSRFQHSGVATRSGFPGDRAPLPQSPPHLAASPPA
RASLSTQAEGSSDSRLYQQCAPRSYDSWDSYRSLRHSYPEPRLHPHLPAAPPPQPCYQPF
AFQGVPENRERAWRQPWGHAPNAGRPLSEPPPLSRYQDVREKVFSNLCNIFPAELVRRVM
ARNPHVTDAQELAAAILAEKSTGF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcaaggaccacctggaggaggacgtgggtcacatcctggacctggggctggat
ctgaactacctccatgtggagagcatggaccgcccccccggagcgagcgctctcgccgcg
gttgttgtggagaagaccggagctcagggcggcggcggcggcggcggcggcggcggcgac
ctgtccgcgggagagtccgaggagagcgccgggtccgacggcgaagcggagcgcgcccgt
ccggcggccacgcccccgcccccaccgtccgagacccccgcggaggatgagcccgagcgg
cgcgacgcgacccaggagtaccgcgccaaggtggagtttgcgctcaagctgggctacagc
gaggagctcgtgcgactggtgctcagcaaactgggtgccgaggcgctcatcaacgacgtt
ctgggcgagctggtcaaactgggcggcagggcggagccggagaccccggggccgccggct
ccgcctcttcccccttcgtcctccggctcctcctcgtcttcgtcttccgtctcctcgccg
tcgggcgtctaccgccgcggttccggctgccagcggccagattcccccctggggcccgcg
gacgatgcggaaaacctgcgaccgatcgtcctggacggcagcaacgtggccatgagccat
ggcaacaaggaagtgttctcatgtcgtggcatccaactggcagtggattggtttcgggac
cgcggtcacaaggacgtgaccgtgtttgttccggcctggaggaaggagcagtcgcggcca
gacgccccgatcacagaccaggagatcctgcggcggctggagaaggagaaggtgctggtg
ttcacgccgtcgcgccgcgttcagggtcgccgcgtcgtttgctacgacgaccgtttcatc
gtcaaactggcgcacgagtcggacggcatcatcgtctccaacgacaactacagggacctg
gccaacgagaagcccgagtggaagaagttcatcgacgagcggttgctcatgtactccttc
gtcaacgacaagttcatgccccccgatgaccctctggggcgtcacggcccgagcctggac
aacttcctgaggaaatggcccatgtttccggagcagagaaagcagccctgcccttacgga
aagaaatgcacctatgggcacaaatgcaagttccaccacccggagaggggcccccagccg
cagcgctcggtcgccgacgagttgagggccagcgctcgctcctccaggggcctgggagag
gcggggctcgtcaagagccacagcgccccctgccccccccggcccgaggggaagcgccct
gcccccaagaggcaatcggagcccgccttgcgcacctactcctgcggcgacctggaggac
cggtcggagggcggggccgaagcggagggggggcgcaggagcagcgcaccgcccccggcg
cccagcatcgcctcctctctatgcggccatgcccaggatgcaaaaggccacgcccacgtg
ggcgcggcccccttctcgtacccggagctatattcccggtgcggttctccggacctcagc
tactactcggtgatcaacggctgctcggcgctgagcctgtcggcggagccgctcgacccg
cggggggcgtcggaggcgtcggactgcagcagcgagggcagcgtcagcggcggcagcagc
tgcgactcgtacggctgcgtcgtgtcgccggaggatggccacaagtgccggcacagccgc
cgccccccgtacccggcctacctccggccgcacccgcacccgaacccccacccccacccc
cacgtctaccacggttacccggagtctgtggctcgggtgcagagctttggcctcgacgac
tcgctcccctgcttgccttcgcgcttccagcactcgggcgtggcgacgcgttccggtttc
ccgggagaccgagccccgcttccccagagcccacctcacctggcggcgtcccccccagcc
cgcgcctcgctctctacccaggccgagggctcctccgactcccgcctctaccagcagtgc
gcgccgcggtcctacgacagctgggactcataccgcagcctccggcactcgtacccagag
ccgaggctccacccgcacctgccggccgctcctcccccgcagccctgctaccagcccttt
gccttccagggtgtgcccgagaaccgggagcgggcctggcgccagccctggggccacgcc
cccaacgccgggcgcccgctctcagagccgccgcccctcagccgctaccaggacgtgcgc
gagaaagtgttctcgaacctctgcaacatcttcccggccgagctggtcaggcgggtcatg
gccaggaaccctcacgtcaccgatgcccaggagctggcggcagccatcttggccgagaag
tcgaccgggttctga
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