Scleropages formosus (Asian bonytongue): 108927057
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Entry
108927057 CDS
T04919
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfm03037
]
108927057 (nphp1)
Cilium and associated proteins [BR:
sfm03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108927057 (nphp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SH3_2
SH3_1
SH3_9
BUD22
BSP_II
Allexi_40kDa
hSH3
SH3_10
Pox_Ag35
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
108927057
NCBI-ProteinID:
XP_018595601
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Position
4:complement(3885214..3894515)
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AA seq
683 aa
AA seq
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MPPKRKGPLQTLQRDTDDIKRQVDSLAREVQQLDRTSDGEGLTEASGRCSSLQKSVEETA
KTLRKLTKADEPAPVGNYEGRKLDEERRLQAIRQQLQSLSLKLSMLQKPTQSEKAATHAS
SRDEPESEDEGEESEEEEEDDDDEEEEEQEEEDQADEEKRADFFVVACSFKGEQEGDLTV
QKGDLLRILSKNPDGWWLAQDSKGRMGVVPKNFLKVPQEEEDEEDDEDESDAEEESADEQ
LEPTTKSSRSHHSNWDVVRKAITEMNATDVLSAMGAIPAGFRPSTLSRMLAEGNTYRSSY
YIQPELSRSQLAFKDLFWDPDTGSVRPRVTRTSLTLTLWSCRMIPGPGVGVQVLSRHVRL
CVFDGVRVLSNIHTVRACHSAKNPKTWTFSPRTAGILPSLLDGDCFVRSDAQSPELGVLF
ELGVTYIRNSTGERGDLSCGWAFLKLFDASGVPVPYRMCELSVSGGTPYEKGVDVDPSIS
SRATGSVFHQMLASRKQPKLLVKLRLPNTRTRATLNLLPDSLVGSTCSAHLLALYRQVLA
DALVRDRPTIQNADLICHPVLATFPEVLDHTDLLDALRSTWAEKESGLRRSHKRDGQRLK
GLFVEVYMSTVFPLLRSSALPSAQWANEEQETLRWNAVFASASPGVRDGLSVLLSANPVQ
EAFDITQVTYDFLGAARRGVETT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagagaaaggggccgctgcagacgctgcagagggacacggatgacatcaaa
agacaggtggactctctggcgagagaggtgcagcagctggacaggacgtcggacggcgag
gggctcacggaggcctctgggaggtgcagcagtctccagaagtcagtcgaagagacggcg
aagaccttgaggaagctgacaaaggcggacgaacccgcccccgtggggaactacgagggg
aggaagctggacgaggagaggaggttgcaggcgatccggcagcagctgcagtctctctct
ctgaagctgtccatgctgcagaaacccacgcaaagcgaaaaggcagcgacgcacgcttct
tctcgagatgagccggaaagtgaagacgaaggagaggaatctgaggaggaggaggaggat
gatgatgacgaagaggaggaggagcaggaggaggaggatcaagctgacgaggagaaacga
gctgatttttttgtcgttgcctgttcgttcaaaggtgaacaagaaggcgacttgacagtg
cagaaaggcgacttattgcgcatcctctcaaaaaaccccgatggctggtggctcgctcaa
gactccaaaggaaggatgggtgtagtccctaaaaatttcttaaaggtgccgcaggaagag
gaggacgaagaggatgacgaagacgagtcggacgctgaagaagagagcgccgacgagcag
ttggagcccaccaccaagtccagcagaagccaccattccaactgggatgtcgtgaggaaa
gcgataacggagatgaacgcgacggacgtgctgtcagccatgggggccatacctgcgggc
ttccggccatccaccctctccaggatgctcgccgaaggaaatacgtacaggagtagttac
tacatccagccggagctgagtcgatcccagctggccttcaaagaccttttctgggacccg
gacacaggaagtgtgcgaccgcgggtgaccaggacctccctgacgctcacgctctggagc
tgcaggatgatccccggccccggggtgggggtgcaggtcctcagcagacacgtgcggctc
tgcgtgttcgacggtgtccgggtgttgagcaacatccacacagtgagagcctgtcacagc
gcaaagaacccgaagacgtggaccttttctccaaggacggccggtatcctgcccagcctc
ttggacggagactgcttcgttaggagcgacgcgcagtctcccgagctgggagtcctcttc
gaactcggcgtcacctacattagaaactccacaggcgagcggggcgacctgagctgcggg
tgggccttcctcaagctgtttgatgccagcggcgtgccggtcccttacagaatgtgtgag
ctgagtgtcagcggagggacgccgtacgaaaagggtgtcgacgtggacccctcgataagc
agccgagccacgggcagcgtcttccatcagatgttggcctccaggaaacagcccaagctc
ctggtgaaactcaggctgcccaacacaaggaccagggccaccttgaacctcctgcccgac
tccttggttggcagcacctgcagcgcacacctgttggctctctacagacaggtgttggcc
gacgctctcgtcagggaccggcccaccatacagaacgccgatcttatctgccacccagtt
ctggcaacgttcccagaggttttggatcacactgatcttctggatgctctgaggagcacg
tgggccgagaaggagagcgggctgaggagatcgcacaagagggacggccagcggctgaag
ggcctcttcgtggaggtctacatgagcaccgtgttccccctgctgcgttcctccgccctt
ccctccgcacagtgggccaacgaggagcaggagacactgcgctggaatgcggtgttcgcc
tccgcctcgccgggcgtccgcgatggcctctccgtcctgctctccgcgaaccccgtccag
gaggcattcgacatcacccaggtgacctacgacttcctgggagcagccagaaggggtgtg
gagaccacgtga
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