Scleropages formosus (Asian bonytongue): 108927153
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Entry
108927153 CDS
T04919
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108927153
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Disaggr_assoc
Motif
Other DBs
NCBI-GeneID:
108927153
NCBI-ProteinID:
XP_018595782
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Position
4:complement(109299..129390)
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AA seq
1459 aa
AA seq
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MESLTRNTYSSGGMSGPSSKVVTETVTTTTRLASLPPSGSSSVVLSSGGGGGSARSGRYS
SSTSGAARKGPGSSPAFLERKTITSRSGGYDGSSSGNSSPEYTRKDYGSGSLSTRGRSHT
RESEIRARLQSASPSTRWTELDDVKRLLKGSRSCSVSPTRSPSNTLPIPKKASVEPRMGS
DASQSVPAQYDTMVLSSALPSYVWTSTLPSGGYRTTPNNLSPTTAPPSIAALGLHNNLSF
GSLPANSAISSSTSSSGGSAGYGVKNSLAGTSSSVLSSAAVNTNAGSGYGVQKNVSSTVN
AVSTVVSASPVATSRSQDDDMLLKDYKFLLLEKENVPVKKDMELLIMSKDSGKQFTSSPF
RTRGGSFSDDSLKKEKMVSSYAEPAVLKAGSQTNYGSAKTYTKDKATYAEIRKEDDCMGG
GAGCCAGDSCCSWWKWLLGLLFLGQLFGLIALAEDVRKLKAHVNTMSSSTAISLQEVDPQ
NLQSTVRDIVRSEVNSEAIRALLKGERGEPGLKGDTGLPGQKGDAGFPGVPGSPGATGHM
GLEGPKGQKGNAGDPGPEGPSGPRGREGPVGPRGDAGPPGFGEKGERGIPGVPGSTGPVG
LIGPMGPKGSIGAHGPPGPPGEPGPQGFRGETGPTGLKGERGANGAPGAKGDLGEKGIRG
APGDPGLPGLPGPTGEKGTKGSTGNPGSDGEKGTRGDQGPIGLPGIRGPAGPPGDAGLPG
SPGLQGPPGIPGNPGQPGLKGDPGEPGRIINPGGANSVVVPGPPGSPGPPGPPGQPGLSG
PIGPAGLPGQPGPKGAKGDQGEKEEAGSYPDNGKGSAGPPGPPGPPGPPGHAGDYVQGPP
GPPGPPGKPGFGQPGPPGQKGEPGSFVPNSGTFFAGPPGPPGPKGAQGIQGQRGYQGEPG
QPGLSGPPGTPGDPGRGSPGLPGSPGPMGPPGAAGPPGPSGPKGPKGDAGVPGAPGIPGS
SRGGVSRVSQGPPGPPGPPGPPGRSGDGALGTDFRQHIVEYLQSDALRPYMIGPQGPPGP
PGPPGLSAGSHSVEDLASRVVAYIQRSGIVIGAPGPAGPPGSVSISDIIALIQRDEVRKY
LIGPPGPPGPAGGSVHASFNIQEVANRVLALMNERGMVGVPGPPGPPGPPGLPGSVSSHL
PTLEKVEYMPRPGPPGPPGPPGNRGPPGPVGPPGIVAGGARYSLEDVKVYLQDAGFTGPP
GHPGPPGPMGPQGPPGDSRGLVSYTGQSQQDWIHAYLQQYFSSDSVRRSITGPPGPPGPR
GEKGECCDSGHNLGVERSYGHSTARGYSQDGANSRDGDNSYRPGGVRGYGDRAYGYNGQW
TETLDYSNVAAKVAEHIKTQGLLQDILSEDRRLGEWRGVQGPPGPPGPRGPPGLSRIIGY
HGNVTADLVDFFRTHGAIMGPPGPKGERGYPGQKGDRGVMGPQGIMGPQGRPGHPGPRGE
KGEKGEQLVVGRRKRSLGV
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttaacgagaaacacatacagttcaggtgggatgtcaggaccctccagcaaa
gttgtgacggagactgtaaccacgacaaccagactggcatcactgcctcccagtggcagt
tcgtcagtagtgctgtccagcggcggtggggggggctctgctcgcagtgggaggtacagc
tcgtccacatcgggggcggcgaggaaaggaccgggctcttcgccggccttcctggagcgc
aagaccataacgagtcgctcggggggatatgatggaagttccagtgggaactcctctcct
gaatacacacggaaggactatggttccggaagcctctccacacgagggaggagccacact
agagagagcgagatccgcgcgcggctgcagagcgcttccccgtccacgcgctggacggag
ctggacgatgtgaagaggctgctgaaggggagtcgctcctgcagcgtgagcccgacacgc
tccccctccaacacgctgcccatccccaagaaggcgagcgtggagcccaggatggggtcg
gacgcctcccagtcagtgccggcgcagtacgacaccatggttctgagctctgctctaccc
tcctacgtgtggacaagcacgctgccctcggggggctaccgcacgacccccaacaacctg
tcccccaccacagcaccgccctccatcgcagctctcgggctgcacaacaacctgtccttc
ggctccttgcctgccaacagcgccatttccagcagcaccagcagcagcggcggcagcgca
gggtacggcgtgaagaacagcctggccggcacgtccagcagcgttctgagctccgcagca
gtcaacaccaacgcgggctcaggttatggggttcagaagaacgtttcttcgaccgtgaat
gctgtcagtacagtggtctctgcatctccagttgccacctctaggtcgcaagatgatgat
atgctcctgaaggactacaaattcctcctgctcgaaaaagagaacgtcccggtcaagaag
gacatggagctcctcattatgtccaaagacagtgggaagcagttcactagctcccccttc
aggacaagaggaggctccttctctgatgactccctgaaaaaggagaagatggtatcgagc
tatgcagagccggcagttctgaaggccggcagccaaaccaactatggatcagcaaagaca
tacacaaaggacaaggccacgtacgcagagatccgtaaggaggatgactgcatggggggt
ggagcagggtgctgtgctggagactcctgctgcagttggtggaagtggctgctgggattg
ctgttcctgggtcagctcttcgggctcattgccctggcggaagacgtgaggaagctcaaa
gctcatgtgaacaccatgagtagctcgactgccattagcctccaagaagtggacccacag
aacctacagagcacagtgcgggacatagtgaggtctgaggtgaactctgaagcgatcaga
gctcttctgaagggagaacgaggagagccgggactcaaaggtgacacgggacttccggga
cagaaaggagacgccggcttccccggtgtgccaggttcaccaggtgccactggacacatg
ggtctggaaggacctaaaggtcagaaaggaaatgcaggggatccaggccctgagggacca
tctgggccaagagggcgagaaggtcctgttggaccccgtggagatgctggacctccaggc
ttcggagagaagggagagagaggaatccctggtgttcctggcagtactggacctgttggt
ttgattggtccaatgggacccaaagggtcgattggagcacacggtcccccaggtccccca
ggagaaccaggacctcagggcttccgtggagaaacaggacctactggactcaaaggggag
cgtggagccaatggggcaccgggagccaagggtgatcttggagagaaaggcatacgtgga
gctccaggtgaccctggactcccgggactcccaggccccacaggggagaaaggaaccaaa
ggatctacaggaaaccctggaagtgacggagaaaaaggtaccagaggtgaccaggggcca
atcggacttcctgggatcaggggtccagcaggacctccaggtgatgcgggacttccagga
tcccctggacttcaaggaccaccaggaatcccaggcaatcctggtcagccaggactcaaa
ggtgatccaggtgaacctggaagaatcattaatccaggtggcgccaactctgtggtagtt
cctggacctccagggagtcctgggccacctggtcctcctggacaaccaggactgtcaggt
cccattggtccagctggacttcccggacaacctggtcctaaaggtgctaagggagaccag
ggagaaaaagaagaagctggatcatatcctgacaatggtaaaggttcagcaggaccccca
ggtcctcctggcccacctggaccacctggccatgcaggagactatgtgcaaggcccccca
ggaccccctggtccaccaggaaaaccagggtttggccaacctggtcccccagggcagaag
ggagagccaggtagctttgtgccaaattcaggaacattctttgctggacctcctggacct
cctggaccaaaaggagcacaaggtatccagggacaaagagggtatcaaggagaaccaggt
caacctggtctttctgggccaccaggcacccctggagatcctggacgagggtctccaggt
cttcctggatcccctggacctatgggtcctcctggtgctgctggaccacctggcccctca
ggtccaaaaggacccaaaggtgatgctggagtaccaggcgccccagggatccctggttct
tccagaggtggtgtctcaagagtgtcccaaggacccccgggcccccctgggcctcccgga
cccccaggtcgctcaggtgacggagccctggggacagatttccgtcagcacattgtggag
tatctgcagagcgatgccctcaggccttacatgattggcccccagggtcccccgggtccc
ccaggtcccccaggactctcagccggatcacattctgtggaggacttggcctctcgagtt
gttgcgtacatccaacgttctggcatcgtcattggtgctccgggtcctgcgggtcctcct
gggtccgtgtccatcagtgacatcatcgccctcatacagagagatgaagtacgaaagtac
ctgattggtccccctgggcctcctggaccagcagggggcagcgttcatgcctcctttaac
atacaggaagtggcaaaccgggtcctggcgctcatgaacgaacgtgggatggttggagtt
cctggacctcctggccctcctggtcctccaggccttcctggatctgtatctagccacttg
cccacattagaaaaggttgagtatatgccgcgaccaggacctccaggtccaccaggaccc
ccagggaacagaggaccccctgggccagttggacctccaggcattgttgctggtggcgcc
agatacagtctggaagacgtcaaggtctacctacaagatgcagggttcactggccctccc
ggccaccctggacccccaggaccaatgggtcctcaagggcctcctggggactctagagga
ctggtgtcatacacgggacagtcgcaacaagactggatacatgcctatctgcagcagtac
ttcagcagtgacagtgtacgacgctctatcaccggccccccagggcccccaggaccccgt
ggagaaaaaggagagtgctgtgatagtgggcacaacctaggggtcgaacgcagctacggt
cacagcacagcccgtgggtacagccaagacggcgccaacagccgagacggcgacaacagc
taccgtccaggtggcgtgcgtggctatggcgatcgtgcttatggctacaatggacaatgg
acggagacactggactactctaatgtagctgcgaaggtagctgaacacatcaagactcag
ggactgctgcaggacatcctctccgaggacaggcgcctaggggaatggcgaggtgtccaa
ggacccccaggaccacctggacctcgagggcctccaggactaagccgcattattggctat
catggcaacgtaacggcagatctcgtggacttcttcagaacacacggagccattatgggc
ccaccggggcccaaaggcgagaggggataccctgggcagaaaggagacagaggggtaatg
ggaccgcaaggcatcatgggtccacagggacggccaggccacccaggcccccggggcgag
aagggtgagaaaggggagcagctcgtcgtcggccgtcggaagaggagcctgggggtgtga
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integrated database retrieval system
