Scleropages formosus (Asian bonytongue): 108927417
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Entry
108927417 CDS
T04919
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04120
Ubiquitin mediated proteolysis
sfm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108927417
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108927417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108927417
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108927417
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108927417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108927417
NCBI-ProteinID:
XP_018596221
UniProt:
A0A8C9RQ29
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Position
20:12099212..12118451
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AA seq
556 aa
AA seq
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MIIMGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGEN
MDLNFLGNRPVQFPYVTPAPHEAVKTLRSLVNIRKDSLRLVRYKDDADSLTEEGGKPKVV
YSVEFTFDTDARVAITLYCQAFEEFTNGMAFYSPKNPTMVSETVHYKRGVSQQFSLPSFK
IDFSEWKEEELSFDLDRGIFPMVIQAVVDEGDEVSGHAHVLLAAFERHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKQLDDENGDNSNECVVCLSDLRDTLILPCRHLCLC
NSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGAVSPVSFSPVLAQTMEHDEHSNSDN
IPPGFEPISLLEALNGLRSVSPGVPSAPLYDDINFSGCLGDPLPLVGRQLGSGDRSGEVG
LQKGKISKSPDSTLRSPSSPIQEEDEEKLSELSDTQPHALISRSPASTEITVAEEGPRCV
TPDEEDGPHSEGEIFQDNISEHSRLTKTESDPPGELSLPGSSQSTESLKSQSTNSSSQPL
LCPPSSLHIEDEQFVP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgataataatgggctcgatactaagccgacgaattgccggagtggaggacatcgacatc
caggcgaactcggcgtacagatatcctcccaagtccggaaactattttgccagccacttt
ttcatgggtggggagaagtttgatacgcctcatcctgagggatacttgtttggagaaaac
atggatctcaacttccttggcaacagacctgttcagttcccttatgtgactccagcaccc
catgaggctgtgaagaccctaagaagcctggtcaatatccgaaaagactctttgcgactt
gtcaggtacaaagatgatgctgacagccttacagaagaaggagggaagcctaaggttgtg
tacagcgtggagttcacctttgacacagatgctcgtgtggctatcacgctgtactgccag
gcctttgaggagtttacaaatggaatggccttttacagtcccaagaacccaacaatggtc
tctgaaacagtgcactacaaacgaggagtaagtcagcagttctcactgccatccttcaaa
atcgatttctctgaatggaaagaggaggagctcagctttgatctggacagggggatcttt
cctatggtgatccaggctgtggtggatgaaggggatgaagtctcagggcatgcacatgtg
ctgttggcagcctttgaaagacatgttgatggcagcttctctgtgaagcccttaaagcag
aagcaaattgtggaccgtgtgagttacctgttgcaggagatttatggaattgaaaacaaa
aacaaccaagagacaaagcaattggacgacgaaaacggtgacaacagcaacgagtgtgtg
gtatgcctttcagacctccgagataccctgattctgccctgcagacacctgtgtctgtgc
aactcgtgcgcagacacattgcgctaccaggcgaacaactgccccatttgcagactgcct
tttcgggcgctgcttcagatccgcgcagtcaggaagaagccaggggctgtatctcccgtg
tccttcagccccgtcctggcgcagaccatggagcacgacgaacactcgaactcagacaac
attccaccagggtttgagcccatctcccttctggaggccctcaacgggctgcgctctgtg
tcccctggggttccttcagcacccctctatgatgacatcaatttttctggttgcctgggg
gaccctttgcctctagtgggccgccagcttggatcaggggaccgttctggagaggtgggc
ttgcagaaaggcaagatcagcaagtcacctgatagcacccttcgctccccatcatcgcct
attcaggaggaagatgaggaaaagctttcggagttgtctgacacccagccccatgccctg
atttccagaagtccagcctccaccgaaatcactgtggcagaggaggggcctagatgtgtc
acacctgatgaagaagatgggcctcactcagagggtgagatcttccaggacaatatcagt
gagcacagccgcctgaccaagacagagagtgatccgccgggagagctgtcattgccagga
tcatcacagtcaactgagagcctgaagagtcaaagcacgaacagttccagccagcctctc
ttgtgtcccccaagcagcctgcatattgaggatgagcagtttgtcccctag
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