Scleropages formosus (Asian bonytongue): 108927453
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Entry
108927453 CDS
T04919
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108927453 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108927453 (dhx16)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108927453 (dhx16)
Spliceosome [BR:
sfm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108927453 (dhx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
PWI
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
108927453
NCBI-ProteinID:
XP_018596290
UniProt:
A0A8C9WN02
LinkDB
All DBs
Position
18:complement(14024093..14036028)
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AA seq
1050 aa
AA seq
DB search
MANLEQWVSDRLHDILGLSDKYVAQFMIGSARRSSGPQDFLSRLRETGTIDIDQNVAAFA
QELFEKIPRKQEVERPARAMERQILEMEKKNRTYTLLEDSDSGGEDVKERSKVKKDKDRA
KKRKHLRKKQEESPSSSEDEKTKSTKMAPKEENVHEETEEEWEKEERERLQDLEERDAFA
ERVKQKDKEKTRHILERNDKKAYEEAQKRLKMAEEDQRKMLPELRKKSRREYLSKREAEK
LEDLEAEIIDEEYLFSNHTLTSQEKEDLDYKKTVRDLAKEYKKAGAKEKEERKNRYYMPE
EKRSKTVPERDLELELEEGSQEIGGEQARWEEERLGAASLHFGAKAERERGLKEESEKYQ
LVLEEDEMINFVSAVTMKGTLMEKENSEPVLSEAEKQRQSIQEVRRSLPVFPYREDLLSA
IDQHQVLIIEGETGSGKTTQIPQYLFEEGYTNRGMKIGCTQPRRVAAMSVAARVAQEMGV
KLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDI
LFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADY
LEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCELLQDRCRRLGSKIPELVILPIYANL
PSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIV
TPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLG
INDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILAS
EQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYNQWVES
GYSTQWCYENFIQFRSMRRARDVREQLEGLMDRIEVDVCSCNDDSVPIRKAVTAGYFYHT
ARITKGGYKTVKHQQTVYVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIDSSWLLEV
APHYYKNKELEDSSSKKMPRKQGKAREELG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcttgagcagtgggtgagcgatcgtctccatgacatcttgggtttgagcgat
aagtatgtcgcccagtttatgattggatcggcccgccgatcctctgggccacaggacttt
ctgtcccgcctccgagagacgggcaccatcgacattgaccagaatgtggctgcctttgcc
caggaattatttgagaagatcccccgcaagcaagaggtagaaaggcctgcacgagccatg
gaacggcagatcctggaaatggagaagaagaaccgcacgtacacattactagaggacagt
gacagtggtggagaggacgtgaaagagaggtcgaaagttaaaaaagacaaagacagagca
aagaagcgaaaacaccttaggaagaagcaggaggagagcccatcatccagtgaagatgaa
aagaccaaaagcacaaaaatggctcccaaagaggaaaatgtacatgaggaaacggaagag
gagtgggagaaagaggagagagagagattgcaggaccttgaagagagagatgcttttgca
gaacgagtcaaacaaaaagacaaagaaaagactcgacacatactggagaggaatgacaag
aaggcctatgaagaggctcagaagagactgaagatggcagaagaggatcagagaaagatg
ctcccagagctgaggaagaagtcccggcgggaatatctgtcaaagcgagaggctgagaaa
ctggaggacctggaggcagagattatcgatgaggagtacctcttctcaaatcacacgctg
acaagccaagagaaggaggacctggactacaagaagacagtccgggacctggccaaggag
tacaagaaggccggagccaaggaaaaagaggaacgcaagaatagatactacatgccagag
gagaagagaagcaagacggttcctgagcgagatctggagctggaactggaggaggggagc
caggagattggtggggagcaggcccgctgggaggaggaacggctgggtgcagcctccttg
cactttggggccaaagctgagagggaacgtggcctgaaggaggagagtgagaagtatcag
ctggtgctggaagaggatgagatgataaactttgtgagtgccgtcaccatgaagggcaca
ctgatggagaaggagaacagcgagcctgtcttgtccgaagctgagaagcaaaggcagtcc
attcaggaagtccgtcggagtttgcctgttttcccatacagagaggatctcctgtctgcc
attgatcagcatcaggttctcatcattgagggagaaacaggctctggcaagaccacacaa
attccacagtacctctttgaggagggttacacaaacagagggatgaaaattggatgtact
cagcccaggagggtggcagccatgtccgtggcagccagagtggcacaggaaatgggcgtc
aagcttggcaatgaggtggggtacagcatcaggtttgaagactgcacctcagagcgtact
gtcttgaagtacatgacagatggaatgctgctcagagagttcctcactgaaccagacctt
gcaagctacagtgtgataatcattgatgaagcccacgaacggactcttcatactgatatc
ctgtttggcctgatcaaagacattgctcgattccgaccggatttgaaggtcctggttgcc
agcgccactctcgacacagagcgcttttcctccttctttgatgatgcacctgtcttcagg
atacctggaagaaggttccctgtggacatatattacaccaaggcccctgaagcagattat
ctggaagcgtgtgtggtctcagtgttacagatccatgttacccagtcccctggcgatgtg
ctggtcttcctcacaggacaggaggaaattgaggcctgttgtgagcttctgcaggacaga
tgcagacgtctgggttccaagattcctgagcttgttatcctccctatttatgccaatttg
ccctcagatatgcaggcaaagatcttcaatcctaccccaccaggtgctcgaaaggttgta
gtggccacgaacattgcagagacctctttaaccattgatggcatcatttacgtcatcgat
cctgggttctgcaagcagaagagctataatgcccggacgggaatggagtcccttatcgtt
acaccctgttctcgggcctctgccaaccagcgtgccggacgagcaggcagagtggctgct
gggaagtgtttccggctctacacagcttgggctttcaagcacgagatggaggagacaact
gtgccagagatccagagaacaaacctgggcaatgtggtgctgctgctgaagagcttggga
attaatgacctcattcactttgactttatggatccacctcctcacgagacccttgtgcta
gctctggagcagctctatgccctaggtgcactcaaccatcttggagaactcacaaagtta
ggtcgtagaatggcagagttacctgtggaccccatgctgagcaagatgatcctggcttca
gaacagtataagtgctcagaggaagttctgaccattgctgctatgctgtctgtgaacaac
tcaatcttctatcgacccaaagacaaggtggtccatgcagataatgctcggatgaacttt
gtcgtgcctggcggagatcacttggtgctcttgaatgtttacaatcagtgggtggagagt
ggttactccacccagtggtgctacgagaacttcatccagttccgctccatgcgtcgagca
agggatgttagggaacagctcgaggggctgatggacaggatagaggtggacgtgtgcagc
tgcaacgatgacagcgtgccgatccggaaggcagtaaccgccgggtatttctaccacact
gcacggatcactaaagggggatacaaaacagtgaagcaccagcagacagtctatgttcat
cctaacagctccttgtttgaggagcagccccgctggcttatttaccatgagctggtattc
acaaccaaggagttcatgagacaggtcatagagatcgatagtagctggctgctggaagta
gctcctcactactacaagaacaaagagctggaggacagcagtagcaagaagatgcctcgt
aaacagggaaaggctcgcgaggagcttgggtga
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integrated database retrieval system
