Scleropages formosus (Asian bonytongue): 108927465
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Entry
108927465 CDS
T04919
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04217
Necroptosis
sfm04622
RIG-I-like receptor signaling pathway
sfm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108927465
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108927465
04625 C-type lectin receptor signaling pathway
108927465
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108927465
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108927465
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108927465
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C67
108927465
Ubiquitin system [BR:
sfm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108927465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
108927465
NCBI-ProteinID:
XP_018596312
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All DBs
Position
9:complement(30391456..30406189)
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AA seq
1161 aa
AA seq
DB search
MSSEGSSKYLFFIIVKELRNSCLPQGSICYIEEMQYVSKINSEEHMKTLEVKSMRYWVTE
RTVQVDALQQLTKKEAELLQALDKDKDRFKCFEDRKKLDFALSLSKDSPVEVNVRGEWCE
GVVRYIGGIKEPERQHPITGMFFGIELMGRHKGKGGSIDSFGLKFFTCERDCAVFVPFTM
VQGAPSKEDSYKNGGDFNHDNNMLSDESNTYLFFIIVQELLYSFDHPQGCICYIEENEYL
SQVKTENSTTLFVRCVDSRLIKSVVSVDALQQLTKKEAELLQTLDKDKDRFKCFEDRKEL
DFALSLSKDSPVEVNVRGEWCEGVVRYIGGIKEPERQHPITGMFFGIELMGRHKGKGGSN
DNFGPNKLFTCERDCAVFVPFTMVRGLPSKLNLGSKCEQNKLSDQSSQYLFFIVVKEPLH
SCDTPQGCICCVQKEEYASKLNSKNMTSLVVTCMNSKLLPKVMSVDALQEITKEEAELLQ
ALDKDKDRFKCFEDRKELDFALSLSEDSPVEVDVNGEWCEGMVRYAGGITELDRQHPITG
MFFGIELKEKHKGKGQTDGTYRGKKYFACGRDCGVFVPFTRLRDSAPKPLDPLLPWKGVS
GYQEEPLVVGERVTFFTDDDRGRHGIVMGLEKKQGMVYVLVSTDTHEKGEDGSPLSIPLQ
CVIKEELLSPDRLEPCMTPNVEDVTFSLGSMVEVKLFEGRTAYGTIRWIGTLPGYDGIRA
GLELEEDIGVSDGTFKNKRFFQCPYKRGLFVRLASCRKDTRFLSAAPPDAAVSERNGDRG
ADELVPGRVAPLTSDKVLKMLMGDMKGIQGHCNSCYMDSALFSLFSCSSVLDSLLFMSVP
QEDAQIQNILLQEIVNPLRTKGFVSEKSMMKLRKKLQSSGHCPTFTTDEKDPEEFLTLLM
SDILRLEPLLKLSTGKKVQESYYYQIFLDQNHSLVLPTVRQLLEHSFWSNSLRLAEVPAC
LILQMPRFGKTFKMFNKIIPTLELDISDLLLDNPQECILCGQLAELECNNCFVDDTFGNT
GFKQLCGKCSLQVHSHPKRSSHKPSHLRIPDGFRPSAIPPKEKLQLFAVLCIETSHYVSF
VRHGRCPEDWVFFDSMADRQGDQDGYNIPRVQACPEVARYLEMPLGELAALNPRDMEGVA
KRLFCDAYMYLYESPRMGLYH
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgagggcagcagcaagtacttgttcttcatcattgtgaaagagcttcggaat
tcatgtctccctcaaggctccatatgttacattgaagagatgcagtatgtctcaaagata
aacagcgaggagcacatgaagactttggaagtcaagagcatgcgttactgggtgacagaa
aggacagtgcaggtggatgccctgcaacagctcacaaagaaggaggcggagcttctgcag
gccctagacaaggacaaggacaggttcaagtgttttgaggacaggaaaaagctggacttt
gccttgagcctctccaaagacagccctgttgaagtgaatgtgagaggggagtggtgtgag
ggtgtggtccgttatattgggggtatcaaagagccagaaaggcaacacccaattactgga
atgttcttcgggattgaactgatggggaggcataagggaaaaggtgggagtattgacagt
tttggactaaagttcttcacctgtgagagggactgtgctgtctttgtcccttttaccatg
gtccaaggtgcgccctccaaagaggattcatataaaaatggaggagactttaaccatgac
aacaacatgctgagtgacgaaagcaacacatatttgttcttcatcattgtgcaggagctt
ctgtactcatttgaccaccctcaaggctgcatatgttatattgaggaaaatgaatatttg
tcacaggtgaagactgagaacagcacgactttgtttgtcagatgcgtagattccaggttg
ataaagtctgtcgtgagtgtggatgccctgcaacagctcacaaagaaggaggcggagctt
ctgcagaccctagacaaggacaaggacaggttcaagtgttttgaggacaggaaagagctg
gactttgccttgagcctctccaaagacagccctgttgaagtgaatgtgagaggggagtgg
tgtgagggtgtggtccgctatatcgggggtatcaaagagccagaaaggcaacacccaatt
accggaatgttcttcgggattgaactgatggggaggcataagggaaaaggtggaagtaat
gacaattttggaccaaataagttgttcacctgtgagcgggactgcgctgtctttgtccct
tttaccatggtccgaggtctgccctccaaactgaatttaggtagtaaatgtgagcaaaac
aagttgagtgaccagagcagccagtatttgttcttcatcgtcgtgaaggagcctctgcac
tcatgtgacacccctcaaggctgcatatgttgtgttcagaaggaggagtatgcttcaaag
ctgaattccaagaacatgacgagtttggtagtcacatgcatgaactccaagttattgccg
aaggtcatgagtgtggatgcactgcaagagatcacaaaggaggaggcggagcttctgcag
gccctagacaaagacaaggacaggtttaagtgttttgaagacaggaaagagctggacttt
gccttgagcctttccgaagacagccctgttgaagtggatgtgaatggggaatggtgcgag
ggcatggtccgctatgctgggggcatcacagagctagataggcaacacccaattaccgga
atgttcttcgggattgaactgaaggagaagcataagggaaaaggccaaactgatggtact
tacagagggaagaagtacttcgcctgtggcagggactgcggtgtcttcgtcccttttacc
aggcttcgagattcggctcccaaacctctggaccccctgctgccgtggaaaggagtatcg
gggtaccaagaagagccactggtcgttggagagagggtcactttctttactgacgatgac
cgaggccgacatggtatagtgatgggcctggagaagaagcagggcatggtctatgtgctc
gtgtccacggacacgcacgagaagggggaggacgggagtcccctgagcatccctctgcag
tgtgtcattaaggaggagctgctctctccagaccgactggaaccatgtatgaccccaaac
gtagaggatgtcaccttcagcctgggctccatggtggaggtgaagctgtttgagggcaga
accgcgtacggcaccatacgctggatcggcacgttgccgggctacgacggaatcagggcc
ggtttggagctggaggaggacataggagtgagtgacggcacttttaagaacaagcgcttt
ttccagtgtccctacaagagaggcctgttcgtcaggctggcttcctgtcgcaaagataca
cgcttcctgtctgcagcgccgccggacgcagcggtctcggagagaaacggagacagagga
gcggacgaactcgtgccgggaagagtggctccgctcacgtcggacaaagtgctcaagatg
ctcatgggcgacatgaagggaatccagggacactgcaactcctgctacatggattctgct
ctcttcagcctgttctcctgctcttctgtgctggactcgctgctcttcatgtctgtgccc
caggaagacgcccagatccagaacatcctgctccaggaaatcgtgaaccccctgcgaact
aagggcttcgtatcggagaaaagtatgatgaaactgcgcaagaagttgcagagcagcgga
cactgccccaccttcaccacagatgagaaagatcccgaggagttcctcacccttcttatg
agtgacatccttcgcctggagccgctgcttaagctgtcaacgggcaagaaagtgcaggag
agctactactatcagattttcctggaccaaaatcacagcctggtgctgcccacggtgcgg
cagctgctggagcactccttctggagcaactcgctcaggttggctgaggttccggcctgt
ctcatcctgcagatgccccggttcgggaaaacgttcaagatgtttaataaaattattcca
acgcttgagctggacatcagtgacctcctgttggacaatcctcaggagtgtatactgtgt
ggccagctggcagaactggagtgtaacaactgctttgtggacgacaccttcgggaacacg
ggcttcaaacagctgtgtggcaaatgttcactccaggtacacagccaccccaagagaagt
tcccacaagcccagtcatctccgcatccctgacggcttccgcccgtcggccatccctccc
aaggagaagctccagttgtttgcggtgctctgcatagagacgagtcactatgtctccttc
gtcagacacggccgctgcccggaggactgggtcttctttgacagcatggcagacaggcag
ggtgaccaggatggatacaacatccctcgcgtccaggcttgtcccgaagtggcgcgctac
ctggagatgccgctgggggagctggcagccctgaacccacgggacatggagggcgtggcc
aagcgcctcttctgcgatgcctacatgtacctgtatgagagtccgcggatggggctgtac
cactga
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