Scleropages formosus (Asian bonytongue): 108927611
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Entry
108927611 CDS
T04919
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04510
Focal adhesion
sfm04512
ECM-receptor interaction
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108927611
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108927611
09142 Cell motility
04820 Cytoskeleton in muscle cells
108927611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Laminin_I
Laminin_G_3
PT
Mce4_CUP1
ATG17_like
Motif
Other DBs
NCBI-GeneID:
108927611
NCBI-ProteinID:
XP_029102163
LinkDB
All DBs
Position
19:4408461..4462616
Genome browser
AA seq
3085 aa
AA seq
DB search
MGLCCTALLLLLSSIVAHGAHTGLFPSILNLASNAEISTNATCGEPEAETYCKLVEHVPG
SRRKHPQCRTCDSESADPRERHPITNAIDGTNAWWQSPSIKNGHQFHWVTITLDLKQVFQ
VAYVIVKAANSPRPGNWILERSVDGLHFQAWQYYAVSDAECLTRYNITPRTGLPTYRMDS
EVICTSFYSRLLPLEHGEIHTSLINGRPSADDPAPELQEFTSARYIRLRLQRIRTLNADL
MALSYQDPRVVDPIVTQRYYYSIKDISVGGMCICYGHAKSCPWDPVTKKLRCICEHNTCG
ENCRECCPGYHQEPWQPGTRSDGNTCEKCNCHNKTEECYYNVTVAAAKMSVNTHGHFVGG
GVCLNCGQNTAGVNCESCADGFFRPSEVSPYEEEPCVQCACDSRGSLSQTCVRDDGDADP
GKGLLPGHCLCRVGFEGPLCDRCAPGFHGFPTCAPCNCNLDGSLGRDPCGDCVCKANVMG
PDCDRCKPGFYNLQGSNPEGCTECFCFGLSNVCDSAPWSWAKVVHKDARLLPLHGASLAD
TGNGSASGSAAPLPLSWAAPQPFLGNKLTSYGGFLNYSVSWGFLAERDDGGESFPSLFYI
VIEGNGRSLRQAIPDELAGAPQQEQLVAMEIVPWNLVDDVSSRTVQQDELMSVLANVSGL
WIRAYAKASAGAPLRLSSVALETADAAVNNRTAARSVELCECPWGYAGTSCEQCLPGFYR
IDGVLFGGNCLQCECHGHASRCDADGRCAGCEHNTGGPHCDQCLPGFYGNALAGTPEDCK
RCGCPLTAEENNFSPTCHLDGEEVVCDQCQQGYGGPRCERCADGYYGEPGVPGRGCAPCD
CNGNVDPAETGNCDPHSGECLKCVGHTAGGHCERCRNGFFGDAIAAKNCTPCGCHELGSA
SSDCDENTGRCACRPDVAGEKCDACDVGHYGLPSGKGCVPCNCSRAGALSRECSEEGACE
CARGVAGDKCDRCARGHYGTVTANCTECDCEHTHGNCHPTTGECACPPHTRGEKCEACED
GHWGHDLETGCKPCDCSTVGSLDSRCHPTGGQCQCGPRFSGLRCERCALGFSVFPECTAC
ICSIQGTREEFCDEGRTLCGCDQSGVCVCKENVGGPQCERCERGTFGLAADHSDGCGPCF
CSGVSSECQELEGLLRVPVTLDTETEHPRLVLVEDVWVGDDTVPSIIPNRDSPPSGDLYW
AAPPAVQRNKLLSYGGKLRYTSSAAAPRGLGAGIAEPPLILIQGGQLSKELLYLDAAAPE
DGREVMAEVLMTEHKWKHFASRQEVNRAEFMSVLSNVELVLIKASGGRTISNVSLETAVE
EADAAAGGERARFIEKCLCPPGYEGLSCQNCAAGHRREVAPPQPTGAERSRVHTCVPCQC
NNHSTSCDVDTGSCQDCQHNTTGAHCHVCAPGYYGKVEGSIHDCSLCACPPGNTQSFSAT
CVLGGAAGFYCDACELGYEGPHCDRCSAGHYGDPLRVDGRCRPCQCSEEGSSSPNCHALT
GQCECRAGVGGRRCTECQEGHALQDGRCIPCDDGCVTLLLDTSAHLELSVQQPVNLSASV
LVPHGYLRSALDDIAKFRTLLSPENQPDSLLQVAEEHLARLSEDIPELQGKALRVFGAAE
ELAQSAEQRLGHSKELLDFISSLHSAASALQEAAGMLNATQDETMDVSNSIRLMEQMLQA
MRDVDLAHKNVLVSDELSAATALLLRVQTDFLKPPRSTDALKDARGLVSALELQLQDAKE
QLLAAQAQNNHTFQLVDRISSQLDHLSELREQRVHAPNRQMASCTEEAQDILALVPIVLE
NTNSSFSLLEAAQEELDSTSTLLRDGVSTLTEKMEKIPEAVQRAEDHAQELDTRALGLHT
ALLGAKNISARATGAIGVNANIRAAVEEAELLGGSAHTTASTILTTTPLLAASARDRRVQ
GVQQSHEILAESAAASAESDGLSVNVTDLGARVSSVRRGVRDVTSRLPGPSAVSALEGSG
SRISQVKEQVATATGSLQATLTLLEDLGHRLNRSSSALDRAAGDVAAAKEQLRASEETVH
EVETALRDVEANAERLLGRLGPLRALGEHLSHNLSHIQLLIQQTRLQAASVKVAVSAQRD
CVRSYRPPASSGNSNSVTVTVRSDEPTNLLFYLGSNSSKDFMALEMHDGKVSFLWDVGSG
HARLEYPDTRIDNNKWHRIEARRFGRRGSLMVQELHSDPRPPAKALSPGSSSVLEVQDST
LVFVGGISDHIVKSEAVQATRFSGCVAQASLNGKAIGLWNYAERWGTCRGCPFSPQVDEA
SFQFDGTAFSVVETAVSPSATHIIMQFRTASPGGLLLYLTSNTTKDFLSIELMEGRVRLT
FELGSGVFTLTTSKAYNTGSWYTLVVQRKKRKAELTVTSAADPSDPEHLEGESPGGASDL
NRANRDPIYIGGLPQAARVARPHASGFYVGCLRNVEVSRSRLNLLQKAHGVSEGCDLAPV
HSVTVLSGGFLQLPPLLLDQQAEVMATFSTHWGDGLILLGFEEAGGRQRRQVLPPFFAVL
LLSGRLEVHLGAGEAGNTHSAVLRARGGTLSDGREHSLLLNWSNRTLTVVLDDDPGPALL
SPGRDFPSLSAVFVGGVPSESFAAHLKTGSSFRGCIGNVVVNGELLDFTVLKRHNVDTGS
CQLDPAPVYSVSPDYGVPRSTVEPTAGPTSGPTAGPTAGPTAGATAGLTAGATAGSTVLL
PAPSPTPAGHQCGAEEHNGSISGALHFGLHMHSHVALNITQHSVRNSFSLLLFVRTFAPS
GLLFYLGAPIQGDYATLQLHGGQLFFTCDLGRNAATATVRRPIDDGQWHSVKADFGKKLV
TLTVDDLSSGPVLAKGKTSTLDVEGKVYLGGLPPDYKARNVGNVTHSIAGCLRDAVLNDE
PLDMDRPVSSLATAGCFAAVQQGSFLDGTGFGAFAKEGYKVGLDITVALEFRTTAPVGII
LSVSGDKSDAIGLELVNGQVVFHVDNGAGRFSAYDPGAPGNVCDGHWHTVSAVKNRRGLS
LAVDGKMVRRANPHPRASSADTKSPIYVGGLPSGLKTSCLTVETPFRGCMRNLRLTRGPQ
IRNLDFSKAFQLHGVIPHSCPAPVE
NT seq
9258 nt
NT seq
+upstream
nt +downstream
nt
atggggctctgctgcaccgccctgctgctcttgctctccagcatcgtcgcgcacggcgcg
cacacaggactgttcccatccatcctcaaccttgccagcaatgccgagatctccacaaat
gccacgtgcggggaacccgaggctgagacttactgcaagcttgtggagcacgtcccaggc
agccggagaaagcacccgcagtgtcgaacctgcgacagtgagagcgcagacccaagagag
cgacatcccataacgaacgccattgacgggactaacgcttggtggcaaagtcccagtatc
aagaatggccaccagtttcactgggtaacaatcactttggatttaaaacaggtcttccag
gtggcctacgtcatcgtgaaggcggcgaactccccccgaccgggaaactggatcctggag
cgctctgtggacgggctccacttccaggcctggcagtactatgccgtcagtgatgccgaa
tgcctgacccggtacaacatcacgccccgcaccgggctgcccacctacaggatggacagc
gaggtcatctgcacctccttctactcacggctccttcccctggagcacggagaaatccac
acgtccttgatcaatgggaggccgagtgccgacgaccccgcaccggagctacaggagttc
acgtccgcccgctacatccgcctgcgcctgcaacgcatccgtaccctcaacgccgacctc
atggctcttagctaccaagacccccgcgtggtggaccccattgtcacgcagcgatactac
tactccatcaaagacatctctgtgggtggcatgtgcatctgctatgggcatgcgaagagc
tgtccctgggacccagtcaccaagaagctccggtgcatctgtgagcacaacacgtgtggg
gagaactgccgagagtgttgccccggataccaccaggaaccatggcaaccgggaacgcgg
tcagatggcaacacttgtgaaaaatgcaactgccacaacaaaacagaggaatgctactac
aacgtgacggtggctgccgccaaaatgagcgtgaacacacacgggcactttgttggtggc
ggcgtgtgcctcaactgcggccagaacacggccggcgtgaactgcgagagctgcgcggac
ggcttcttccggcccagcgaggtgtccccgtatgaggaggagccctgtgtccagtgtgcg
tgtgattcccgcggatcgctgagccagacgtgcgtccgagacgacggcgatgcagatccc
ggcaaaggcctgctccccggccactgcctctgcagggtgggcttcgaaggacccctgtgc
gaccgctgcgcccctggattccacggcttcccgacctgcgccccctgcaactgcaacttg
gacgggagcctgggccgcgacccgtgcggcgactgcgtctgcaaggccaacgtcatgggg
cccgactgcgaccgctgcaaacccggcttctacaacctgcaggggagcaacccggaggga
tgcactgagtgcttctgtttcggactatccaacgtgtgcgatagcgccccctggtcctgg
gccaaggtggtgcacaaggacgcccggctgctccctctccacggtgcctctctcgccgac
acggggaacggaagtgcatccggcagcgccgcgccgctcccgctctcctgggccgctcct
cagccgttccttggcaacaagctcacgtcatacggcggcttcctgaactactctgtatcc
tggggctttttggcggagagggacgacggcggggagagtttcccctctctcttctacatt
gttattgagggcaacgggaggagccttcggcaggctattccagacgagctggcgggcgcc
ccccagcaggagcagctcgtcgccatggagatcgtcccgtggaacttggtggatgacgtc
agcagccgaacggtgcagcaggatgagctcatgagcgttctggccaacgtgagcggcctg
tggatcagggcctacgccaaggccagcgcaggagcgccactccgcctcagctcggttgct
ttggaaacggcagatgctgccgtcaacaaccggacggcggctcggagcgtggagctctgc
gagtgtccctggggctacgccgggacgtcctgcgagcaatgtctccctggattttaccgc
attgatggagtcctgtttggagggaactgcctccagtgcgaatgccacggacacgcctcg
cggtgtgacgccgacggccgctgtgcgggctgtgaacacaacaccggaggccctcactgt
gaccagtgtctaccaggtttctatggcaacgcactggcggggacccccgaggactgcaag
agatgcggctgccccctgacagcggaggagaacaacttcagtccaacctgccatctggat
ggcgaagaagtggtgtgtgaccagtgccagcagggctacggcggtccccggtgtgaaagg
tgtgccgacggctactacggagagcccggtgtcccgggacgaggctgcgccccctgtgac
tgtaacggcaacgtggaccctgccgagaccggcaactgcgacccgcacagcggcgagtgt
ctcaagtgcgtgggccacacggcgggggggcactgcgagaggtgccggaacggcttcttt
ggcgacgccatcgctgccaagaactgcacaccttgcggctgccacgaactcggctccgcg
tcgtccgactgcgacgagaacacgggacgctgcgcctgcaggcccgacgtggcgggagag
aagtgcgacgcgtgtgacgtgggacattacggcctcccgagcggaaagggctgcgtcccg
tgcaactgcagccgcgcgggggcgctgtcccgggaatgcagcgaggagggggcctgcgag
tgtgcccgtggtgtggcaggggacaaatgtgaccgctgtgcccgcggacattacggcacc
gtgaccgccaactgcacagaatgcgactgcgaacacacccacggcaactgccacccgacc
accggcgagtgcgcgtgtcccccgcacacacggggggagaagtgtgaggcgtgcgaggac
ggccactggggtcacgacctggagacggggtgtaagccgtgtgactgcagcaccgtgggg
tccctggactcccggtgccacccgaccggcggacagtgtcagtgcggtccccggttctcc
ggcctgaggtgcgagcgatgcgctctgggcttcagcgtcttcccagaatgcactgcgtgc
atctgcagcatccagggcactcgggaagagttctgcgatgaggggcggaccttgtgcggc
tgtgaccaatcgggtgtttgcgtctgcaaggagaacgtgggcggtccgcagtgtgagcgg
tgcgagcgagggactttcggcctggccgccgaccatagtgacggctgcgggccctgcttc
tgctcgggggtctcctccgagtgccaggagctcgaggggctgctccgggttccggtcacc
ttggacacagagacagagcacccgaggctggtccttgtggaggatgtttgggtgggcgac
gataccgtgccgagcatcatcccgaaccgggactccccgccctcaggtgacctctactgg
gcggcgccccccgcggtccagaggaacaagctgctgtcctacggcggaaagctgcgctac
acgagttccgccgccgccccccggggtttaggggccggaattgctgaacccccactgata
ctaatacagggtggtcagctgtccaaggagctcctctacctggacgcagcggctcccgaa
gacgggcgggaggtgatggccgaggtcctcatgaccgagcacaaatggaagcattttgct
tctcggcaagaggtgaatcgtgccgaattcatgtctgtcctgagcaacgtggagctcgtt
ctcatcaaggcctctggcggacgcacgatctccaacgtctctttggagacggcggtggag
gaagccgatgccgcggcgggtggcgaacgggcacgcttcatcgaaaaatgcctctgtccc
ccggggtatgagggcctgtcctgccagaactgcgccgccggacatcgcagagaggtggcg
ccaccgcagcccacgggagccgaacgttcacgcgttcacacctgtgttccgtgtcagtgc
aacaaccacagcacctcctgcgatgtggacaccggcagctgtcaggactgccagcacaac
accacgggggctcactgtcacgtctgcgccccagggtactatgggaaagtggagggatcc
atccatgactgctctttgtgtgcctgtcctcctgggaacacgcagagctttagcgccacc
tgtgtcctcggaggcgccgctggtttctactgcgacgcgtgtgagctgggctacgagggg
ccgcactgcgacaggtgctcagccggacactacggggaccccttgcgggtggacgggcgc
tgcaggccgtgccagtgcagcgaggaggggtcctcgagcccgaactgtcacgctctgacc
ggacaatgcgagtgcagggccggcgtgggggggcgccgctgtaccgagtgccaggagggc
cacgcgctgcaggacgggcgttgcatcccctgcgacgacgggtgcgtgaccctgctgctg
gacacctcggcccatttagagctgagcgtccagcagcctgtgaacctgagcgcatcggtc
ctcgtgccgcacggttacctgcgttcagcgctcgacgacatagcaaagtttaggactctc
ttgtcgccggagaaccaaccggacagcttgttgcaggttgccgaggaacatctggcacgc
ctgtctgaagacattcccgagctgcaggggaaggcactcagggtctttggagccgctgaa
gaactcgctcagtccgctgaacagagactcggtcacagcaaagagcttctggacttcatc
tccagcctgcattccgctgcctctgctttgcaggaagcagccggcatgttaaacgcaacc
caggatgagacgatggacgtgtccaacagcatccgattgatggagcagatgctgcaggcc
atgagggatgtggacctcgcccacaagaacgttctagtttctgatgagctcagcgctgcc
acggcgctcctcctgcgggtccagacggacttcctcaagcccccgcggagcacagacgcc
ctgaaagacgcccgaggactcgtgtccgcactggagctccagctgcaggatgcgaaggag
cagctgctggccgctcaagcgcagaacaaccacaccttccagctggtggacagaatctcc
tcccaactggaccatctcagcgagctgagagagcagagagttcacgctccgaacagacag
atggcatcatgcacagaggaagcacaagacatcttggccctcgttcccatcgtgctggag
aatacgaacagcagcttttctctattggaagcggcccaagaggagctggactccacgagc
accctgctgagagacggagtgtccacgctgaccgagaagatggagaaaattccggaagcg
gtgcaaagagcagaggatcatgctcaggagctggacacgcgggccctggggctgcacacg
gctctgctgggcgcgaagaacatttcggcgagagccaccggcgccatcggcgtcaacgcc
aacatcagggcagccgttgaggaagcagagctcctgggggggtcagcccacaccacagcc
tccaccatccttaccacgactccgctcttagcggcatctgccagagacaggagggtccag
ggtgtccagcaaagtcacgagatcctggcagaaagtgcagcagcgagtgcagaaagtgat
ggcctctcggtgaacgtcacggacctgggtgcgagagtgagctcggtgcggcgcggtgtt
cgggacgtcaccagcaggctacccggaccctcagctgtgagcgcacttgaagggagcggc
tcaaggatctcccaggtaaaggagcaggttgctacggcaacaggatccctacaggccacc
ctgacgcttctggaggacctcggccacaggctgaaccgctcctcttccgccctggaccgg
gctgctggggacgtggcggctgccaaagagcagctcagggcctccgaggagacagtccac
gaggtggagacagcgctcagggacgtggaggcgaatgcggagcgtctgctgggccgcctg
ggacccctgagagcgctcggggagcacctgagccacaacctgtcccacatccagctcctg
atccaacagactcgcctgcaggcagcatcggtcaaggtagcggtgtctgcgcagcgggac
tgtgtgcgctcctacaggccgcccgcgtcctccggcaactccaacagcgtgacggtgacg
gtgaggagcgacgagcccaccaacctgctcttctacctgggcagcaactccagtaaggac
ttcatggcgcttgagatgcatgatgggaaggtgtccttcctgtgggatgtgggctctgga
cacgcgaggctggagtaccccgacacccgcatcgacaacaataagtggcaccgcatagag
gccagaaggtttgggaggaggggctccctgatggtgcaggagctccattcggaccctcgg
cccccggcgaaggctttgtctccaggctcgtcctcagtgctggaggttcaagactccaca
ctggtgtttgtgggaggcatcagcgaccacatcgtgaaatcggaggcagtgcaggcgacc
cggttcagcggatgtgtggctcaggcgtctctgaacggaaaggccatcggtctgtggaac
tacgccgagagatgggggacgtgtcgaggctgtcctttcagcccccaggtggacgaggcc
tcgttccagttcgatggcaccgccttctccgtggtggaaacggccgtgtctccgtcggcc
actcacataatcatgcagttcaggacggcgtcccccggcggcctgctgctgtacctgacg
tccaacaccacgaaggactttttgtccatcgagctcatggagggaagggtgcggctcacc
tttgagctgggatccggcgtgttcacactaaccacgagcaaagcctacaacacaggcagc
tggtacacacttgtggtgcagaggaaaaaacggaaagccgagctcaccgtgacgtccgcc
gccgacccctcggacccggagcacctggagggcgagtctcccggtggcgcctccgacctg
aaccgcgccaaccgagaccccatctacatcggggggcttccgcaggccgcacgagtcgcg
aggcctcatgcttcgggcttttacgttggatgcctgagaaacgtggaagtttctcgctca
cgtctcaacctgctgcagaaggcgcacggtgtcagcgaaggctgtgatttagcgcccgta
cacagtgtcacagtgctgagcggggggttcctccagctgccccccctgctgctggaccag
caggctgaggtcatggccaccttctcgacgcactggggcgacgggctcatcctgctcggg
ttcgaggaagcgggaggccgacagcgcagacaggttctgccgccgttcttcgccgtcctg
ctgctctccggtcgtctcgaggtccacctgggcgccggggaggctgggaacacacacagc
gccgtgctgcgtgccagaggcggcaccttgagcgatggacgggagcactcgctcctcttg
aactggagcaacaggaccctgacggtggtgctggatgacgaccctggacctgcgctcctg
tcccctggaagagactttccgagtctctccgcagtcttcgtggggggcgtcccttcggaa
agcttcgctgcgcatttgaagaccggcagctccttccgcggctgcatcggcaatgtggtc
gtcaacggcgaactgctggacttcactgtgctgaagcgtcacaatgtggacacgggcagc
tgtcagctggacccggcacctgtgtacagcgtctcgcctgactacggggttcccagatca
accgttgaaccaaccgctggaccaacttctggaccaactgctggaccaactgctggacca
actgctggagcaaccgctggactaaccgctggagcaaccgctggatcgactgtgctgctt
cctgctccatctccgacccctgctggccatcagtgtggagctgaagagcacaacgggagc
atctcgggggccctgcacttcggcctccacatgcacagtcacgttgcgctgaacatcacg
cagcattccgtccggaacagcttctctctgctactcttcgttcggaccttcgcccccagc
ggtcttcttttttacctgggagcccccatccagggagactacgccaccctgcagctgcac
ggggggcagctcttcttcacctgcgacctgggaaggaacgcagccacggccacggtgcgg
cggcccatcgacgatggccagtggcacagcgtaaaagcagacttcgggaagaaactcgtg
acgctcacagtggacgacttgagctcaggtccggttctggcgaagggcaaaaccagcacc
ttggacgtggagggcaaggtctacctggggggtctgcccccggactataaggccaggaat
gtcggcaatgtgacccacagcatcgccggctgcctcagggatgcggtgctgaacgacgag
ccgctggacatggacaggcccgtctcctcgctcgccaccgcaggctgcttcgctgccgtc
cagcagggcagcttcttggacggcaccgggttcggcgccttcgccaaagagggttacaag
gtgggcttggacatcactgtggccctggagttccgcaccacggcccccgttgggatcatc
ctttcggtcagcggcgacaagtcggacgccatcggtctggagctggtcaatgggcaggtc
gtgttccacgtggacaatggagcagggcgcttttcagcctatgaccccggggccccggga
aacgtgtgcgacggccactggcacaccgtgtcagccgtgaagaataggcgaggcctcagc
ctggcggtagatgggaagatggtccgcagggcgaacccacaccctcgcgcctcctccgca
gacaccaagagccccatctatgtgggaggcctccccagtgggctgaagacgagctgcctg
actgtcgagacaccgttccgcggctgcatgaggaacctgcgcctcaccagggggccgcag
atccgcaacctcgacttcagcaaagccttccaactccacggtgtcatcccacactcctgc
cccgcaccggtggagtga
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integrated database retrieval system