Scleropages formosus (Asian bonytongue): 108927650
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Entry
108927650 CDS
T04919
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108927650 (pms1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108927650 (pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108927650
NCBI-ProteinID:
XP_018596579
UniProt:
A0A0P7UD29
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Position
12:28105452..28123867
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AA seq
925 aa
AA seq
DB search
MRQLPADTVRLLSSSQIVTCVSNVVKELVENSLDAGASSIEVKLENFGLDRLEVRDNGSG
IKAVDAPVMALKHYTSKICCHDDLERLETYGFRGEALGSICAVAEVTVTTKTVSDKFSTQ
YTLNHTGHITSQKPSHLGQGTTVCVLKLFKNLPVRRQLYSNNKKCKEELKKAQDLLMAYG
IIKPELRILLTHNKAAVWQKAKVPDHRTALMAVLGTAPMANMVPLQHHQEEPEVTIEGYF
PKRGSDYSLTSSSNCDRTFIFINDRPVRHKEILKVLRQQYSSQVERDVSQSRYPILMMSI
TVPAASVDVNVTPDKTHVMLHNKDAVLLVVETMLVSLYGPESRTEPAFHSGAVAVVPDPS
NCGSVLDDAGTGLDPPRCHTASLSRSSSSSQGGGADPDTALDPRSEEQGDHTAQPLQSRS
ADTSSSSISEDWVVDSIPRIPDLNLSLTDDDSILDALGTADFGPAEDGESPANAGRTGGV
DTPEISAESWSRGHGLLDPDSREPLVPVKVCVPGATETEGTECEKRERMSSGVGDKASKL
TAYDLISSCAVRRPLSASAIFEQEARAAVLRENPTASPRDIAAALEERWKNLGAEGRKKY
EEKAEKELNRYNLQSKKVSERVTPAGESEKQPKLPLLSSGSLLAQKRKASFSQQQLDQLF
SQPPKKKKTLPKNQSTLVPFSLEALRRRLTTRPVPCSTLGGLEIVGRLSSHGAWLVLRSH
TLMLLNPSLLEEALLFNRLLETNVLPAASLCTPVQLTEGLLGGPENTRVLCDMQKETADL
SGATYFSDPRLVANGFRIRLTPGSPSTESHLEVVGMADCVPFFGVADLREILTAIVKRNA
ATVKDCRPLKVHSFLEGEAVRLARQLPLRLSREDVRDMLSRKERQLSARDETCLHGRPFL
HPLADVPETEQDAVRIAAATTCWST
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctgcccgccgacacggtgcgtctcctctccagctcccagatcgtcacctgc
gtgagcaacgtggttaaggagctggtggaaaactcactggatgctggagcttccagcatt
gaagtcaagctggagaattttggattggaccgccttgaagtgcgggataatggatctgga
atcaaagcggtcgacgctccggtaatggcgctgaagcactacacgtccaaaatctgctgc
cacgatgacctggagcgcttagagacgtatggtttccggggagaagccctgggatccatc
tgcgcagtggctgaggttactgtgacgacgaagacagtcagtgacaaattcagcactcag
tatacattgaaccacactggacacatcacctcccagaagccttctcatcttgggcaaggt
accacagtttgtgtgctgaagctctttaagaaccttccagtgagaagacaactttactcc
aacaataagaagtgtaaggaggagctgaaaaaagcacaggacctcctgatggcgtatggt
atcatcaagcctgaactcaggatcctgctgacccacaacaaggcagcagtgtggcagaaa
gccaaggtgccagatcaccggacggccttgatggcagtgcttggaacagcccccatggcc
aacatggtgcccctgcagcatcatcaggaggagccagaggttacaatagaaggatatttt
cccaaacgaggatcagactacagtctcacaagctcaagtaactgtgacagaacatttatt
tttattaatgatcgacctgtccgtcataaagagattctcaaggtgctgaggcagcagtac
agctcccaggtggagcgggacgtcagccagagccgttaccccattctcatgatgagcatc
accgtccccgctgcctccgttgacgtcaacgtcacgcccgacaagacccatgtcatgctc
cataacaaggacgccgttctgctggtggtagagaccatgctggtgtcgctgtacggacct
gagtccagaacagaacctgccttccactcaggagcggttgcagtggtaccggatccatcc
aattgcggttctgttctggatgatgctggaacgggtcttgaccccccaaggtgccatact
gcgtctctgagccgcagctcctccagcagccaaggcggtggcgccgacccagacacagct
ttggaccccaggtccgaagagcagggagaccatactgcacagcctctccagagccggtca
gcggacaccagttcctcgtccatctcggaagactgggtagtggacagcatcccacgcatc
ccggacctgaacctgtccctgacggatgacgacagcatcctggatgctctcgggacggca
gattttggtccagcagaggatggcgagagtccggcgaatgcaggccgtacaggaggggtg
gacactcctgagatttcagctgagagctggagcagaggccacggtctgctggaccctgat
agtagagagcccctcgtgcccgtgaaggtttgcgttccaggtgcaacggagacagagggg
acagagtgtgagaagcgtgaaaggatgtccagtggagtgggtgacaaggcgtcaaagctc
acggcctatgacctgatcagcagctgcgccgtgcgccggcctctgtccgcaagcgccatc
ttcgaacaggaggcccgagccgcggtcctgcgggagaacccgacggccagcccacgggac
atcgccgccgccctggaggagagatggaaaaacctgggggcggaaggcaggaagaagtat
gaagagaaggctgagaaagagttaaaccgctacaatctccagtccaagaaggtttcagag
cgtgtcactcctgctggggaatcggagaagcaacccaaactgcccttgctgtctagcggg
agcctcctggcccagaagcgcaaggcctctttctcccagcagcagctggaccagctcttc
tcccagcccccaaagaagaagaaaacccttcccaagaatcagtccacccttgtcccattt
agcctggaggcgctccggcgtcgactcaccacccgcccggttccatgctcgaccctggga
ggcctggagatcgtgggacgcctgtcctcgcatggcgcctggctcgtcctgcgctctcac
acacttatgctactcaacccgtcccttctggaggaggctctgctctttaaccgcctcctg
gagactaacgtcctcccggctgcgagcctctgcacaccggtgcagttaacagaggggctc
ctcggagggccggagaacacgcgtgtgctctgcgacatgcagaaggagacggctgacctg
agcggagcgacctacttctccgacccaaggctcgtggcaaatgggtttcggatccgactg
actcctggctccccgtccacagagagccatctggaagtagtgggaatggcagactgcgtg
ccgttcttcggtgttgcagacctcagggagatcttgacggccatcgtgaagaggaacgca
gcgacggtgaaggactgcaggcctctcaaggtgcacagcttcctcgagggggaggcagta
cggctcgcacgacagctgcccctgaggttgtcaagggaggacgtcagagacatgttgtcc
cggaaggagcggcaactcagtgcaagagacgagacgtgtctccacgggcgtcctttcctg
cacccgctcgctgatgttccggagacagagcaggatgccgtgcgcatcgctgctgccacc
acatgctggagtacctga
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