Scleropages formosus (Asian bonytongue): 108927805
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Entry
108927805 CDS
T04919
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108927805 (zc3h12a)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108927805 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
108927805
NCBI-ProteinID:
XP_018596882
UniProt:
A0A8C9TJ84
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Position
19:646676..666294
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AA seq
646 aa
AA seq
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MLAIGGVPTSPPAFCDAMDSGCWNTVPGEAPAPVGGPMGGPMGGPGQPDADEEFQLRVDF
FLKLGYSVREVRAVLLKLGLAADTNAVLGELVRSGVAADRGPSPGAPVPVLVPRGGSSAK
TPASLSATMPPSQEGEEEQENLLRPIVIDGSNVAMSHGNKEVFSCQGIRLAVNYFLDRGH
TDIKVFVPLWRKEQPRPDVPISDQHILRNLEKKKIVVFTPSRRVGGRRVVCYDDRFIVKL
AHETDGVIVSNDTYRDLQSERPEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFL
RKKPQVSEQKRQPCPYGKKCTYGIKCKFYHPERAHQSQRSLADELRENAKLSAVKEDKKP
GLLKRGGQPDSCPFPSSAPLEQELERKLSVDGVRSPRKAQQLKENVPLCWSGSPWSEWPR
HPSPGGMDSSLLHSSWEHLDSGLGSYESLRNHNHSNPCGAEVPQWRCSSASPKQPYRHGG
DVERQEAFPPCSTCSSVVPPACLHQYARGHNGDFTAALLPGYSRYGGHLYPAVGRHFSLP
SKLERGATVSHQEEYWALRAGSPSSLPDPHQTSSHLAQGHAPPYRERWTLPHQAAFEAER
EEVRKKLQAIFSPDHVDKVMSMFPQQLDPQKLAAEILSLKSQGGIP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctggccatcggaggtgtaccgacatccccacccgccttctgcgacgcaatggactcc
ggctgctggaacacggtcccgggcgaggctccggccccggtggggggcccgatggggggc
ccgatggggggcccggggcagccggacgctgacgaggagttccagctacgggtggacttc
ttcctgaagttgggctactccgtcagagaggtgcgggccgtcctgctcaagctgggcctg
gccgccgacaccaacgcggtgctgggcgagctggtgcggagcggcgtcgccgccgacagg
gggccgtctcccggcgccccggtgccggtgttggtcccacgaggggggagctcggccaag
acccccgcgagcctgtctgcgacgatgcctccatcccaggagggcgaggaagagcaggag
aacctgctgaggcccatagtgattgatggaagcaacgtagccatgagccacgggaacaaa
gaagtcttttcctgccaaggtattcggctcgcagtcaactacttcttggacaggggtcat
actgatataaaagtgtttgtgcccttgtggcgaaaagagcaacccaggccagatgtgcca
atctcagatcagcacattctgcgcaacctggagaagaagaagattgtggttttcactcct
tcgcggcgggtgggcggcaggcgagtggtctgctatgacgaccgcttcatcgtcaagctg
gcccatgagacagatggcgtcatcgtgtccaatgacacttaccgtgacctgcagagcgag
cgccctgagtggaaacgcttcatcgaggagcgcctgctcatgtattcctttgtcaatgac
aagttcatgccccccgatgaccccctgggtcgacacggtcccagcctagacaacttcctc
aggaaaaaaccacaggtgtctgaacaaaagcgccagccttgtccttatgggaagaagtgc
acttacggcatcaagtgcaagttctaccacccggaacgagcgcaccagtcccagcgttct
ctggccgatgaactccgtgagaatgccaagctctctgctgtgaaggaggacaagaagcct
gggctgctgaaaaggggggggcagccagattcctgtcccttcccatcttctgcgcccctc
gagcaggaactggagcggaagctatccgtcgacggcgtccggtcacccaggaaagcccaa
cagctcaaagagaatgtgccgctctgctggagcgggtcgccgtggtcggagtggccgagg
cacccttcgcccggcggcatggattcatccctgctccacagctcctgggaacacctcgac
tctggcctgggctcctacgagagcctgcgcaaccacaaccactcaaacccctgtggggcc
gaggtcccccagtggcgctgctcgtctgcctcacccaaacagccctaccgacatggcggc
gacgtggagaggcaggaggccttcccgccatgtagcacttgctccagcgtagtcccgcca
gcctgccttcatcagtacgcccgtggccataacggtgattttaccgcggccttgttgccc
ggctattcacgttacggcggtcacctgtacccggcagtcggtcggcacttcagcctcccc
agcaaattggagcgaggcgccaccgttagccaccaggaagagtactgggccctgcgggca
ggctcccccagcagcctcccggaccctcatcagacttccagtcaccttgcgcagggccac
gcgcctccctatagggagaggtggaccctgccgcaccaggcagcttttgaggctgagcgg
gaggaggtccgaaagaagctgcaggctattttcagccctgaccacgtcgacaaagtcatg
agcatgttcccgcagcagctggacccccagaaacttgctgctgaaatcctctccctgaag
tcccagggagggattccctga
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