Scleropages formosus (Asian bonytongue): 108927968
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Entry
108927968 CDS
T04919
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108927968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108927968
03036 Chromosome and associated proteins [BR:
sfm03036
]
108927968
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108927968
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108927968
PBAF complex
108927968
GBAF(ncBAF) complex
108927968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
SpeFL
DUF919
Motif
Other DBs
NCBI-GeneID:
108927968
NCBI-ProteinID:
XP_018597190
LinkDB
All DBs
Position
23:complement(22505988..22533503)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAATAAGVVLTGGPAANQMAGGALLSKRKDGSPSTKFWESSETVFQIESVRQWIGKHYKK
YVQTDSPTSKSLAGLVVQLLQFQEDAFGRRVSNPALTKLPTKCFLDLKPGGGLCHILGSV
YKFKSEQGWRRFDFQNPSRMDRNVEMFMTVEKALVQNNCLTRPVVFLTPDIEQKQAAKFK
DIIKRHQGSITEERAKATHIIYPSQDSEEEEEWFRTIMRKDKQVLVHWGMYPDSYDTWVF
ASDVEADVEDPPSPEKPWKVHAKWVLDTDSFNEWMNEEDYEVDDNKKTVFFRQRVFPREE
ESSRTPDRKERRAAAAGKKRRRSPSPPPTTAESRKKGSKKGSSMSYYKRRGQREEEEQED
DLTKDMEDPTPVPNMEEVILPKNVNVKKDSENTPVKGGIMADLDEQEDESMLSGCKDDEE
PGKDVNRLLDSGEDNVTEQTHHIIVPSYASWFDYNCIHEIERRALPEFFNGKNKSKSPEI
YLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRPL
PMGPPPTPHFNVLVDTPSGLVPLPHRPSQVPASQQMLSFPEKSKEKPTDLQNFGLRTDIY
AKKNPKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIE
DPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVRE
EVPSELLEAHVKKVQEAACSTGKVDPSFGLESSGIAGTAPEEPEKTEGADLEKMEADPEG
QQTDKAEEKEEADKPGELTERSLESETTKSEAPDTADRQETDVEGGEDSKMDKDKEESSE
NTEGQKESEAEDTGRRNEPELGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQTFHMEQLKYAELKARQQMEQ
QQAAAQNPGGLHGPPASMHGPPPQGFNPMHHPMGSHHPPQTVGPMPGRMMPGGPPTSNMP
PVMGTRHSGAPNGMYPVPPPSQSDGIASTPAGAPVAGPVRTVPEN
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagcagcaggagtagtgcttaccggaggacctgcagcaaatcaaatggcc
ggtggcgctttgcttagcaagaggaaagatggcagtccgtcgaccaaattctgggagagc
tcggaaacagtgtttcagattgagtcggttcgacagtggattggaaaacattacaagaag
tatgtccagaccgactctcccaccagcaagtctctagcagggttagtggtgcagctgctg
cagttccaggaggatgccttcggacgcagggtcagcaaccctgcacttacaaagctgccc
accaagtgtttcctggacctgaagccagggggtggcctgtgccacattctgggctcagtg
tacaagttcaaaagcgagcaaggctggcgcaggttcgactttcaaaacccatcccggatg
gacaggaatgtggagatgttcatgacggtggagaaggctcttgtgcagaacaactgcttg
acgcggcccgtggtgttcctcactccagatatagaacagaagcaggctgccaagttcaaa
gacatcatcaagaggcaccagggttccattactgaagaaagggctaaggccactcacatt
atctacccatcccaagactcagaggaagaagaagagtggtttcgcaccatcatgcgcaag
gacaaacaagtgttggtgcactgggggatgtaccctgacagctatgacacatgggtgttc
gccagtgatgtggaggctgatgtggaggatcctcccagtccagagaagccctggaaggtt
catgccaagtgggtcctcgacacagactccttcaatgagtggatgaacgaggaggattat
gaggttgatgacaacaagaagactgtctttttccgtcagcgtgttttccctcgtgaagaa
gagtcttcccgtacacctgatcgcaaggagcgtagggcagctgctgccgggaagaagagg
aggcgctcgccatcaccgccaccaaccactgcagagtctcgcaagaaggggagcaaaaaa
gggagctccatgtcgtattacaagcgccgaggtcaacgagaagaggaggagcaggaggat
gacctcaccaaggacatggaggaccccacgcctgtgcccaacatggaggaagtcatccta
cccaagaatgtgaacgtgaagaaggacagtgaaaacaccccagtcaaaggtggcatcatg
gctgacttggatgaacaggaggatgagtcaatgctgtctggctgcaaggatgatgaggag
ccaggcaaggatgtaaaccgcctgttggactctggcgaggacaatgtgacagagcagacg
caccacatcattgtccccagctatgcctcctggtttgattataactgcatccatgagatt
gagcgaagggccctcccagagttcttcaacggcaagaacaagtccaaatctccagagata
taccttgcgtatcgtaattttatgattgacacctatcggctcaaccctcaggagtacttg
acctccacatcctgccgtagaaacttgactggcgatgtgtgtgctgtcatgagagttcat
gctttcctggagcagtggggactggtgaactaccaggtagatgctgagagtcggcccctt
cccatgggcccaccaccaacaccccacttcaacgtgcttgtggacacaccttcgggcctg
gtgcctctcccccaccgtccatctcaagtacctgcctctcagcagatgctgagtttccct
gagaagagcaaagagaagccaacagacttgcagaactttggcctgcggactgacatctac
gccaagaagaatcccaagagcaaaggggccagtgctggacgcgagtggacagagcaggag
accctgctgttgctggaggccctcgagatgtataaggacgactggaacaaggtgtcagag
catgtgggcagccgcacacaggatgagtgtatcctgcacttcctgcggctgcccatcgaa
gacccctacctggagaactcagatgcctcacttggcccactggcttatcagcctgtgccc
ttcagccagtcggggaaccctgtcatgagcaccgtggccttcctggcctctgtggtggac
ccccgtgtggcagctgctgcagcaaaggcagcccttgaggagttttcacgggtgcgagaa
gaggtaccctcggagctgctggaggcacatgtgaagaaggtgcaggaggcagcatgcagc
acaggcaaggtcgacccttcctttggcctggagagtagtggcattgctggcactgcaccc
gaagaacccgagaaaactgaaggagcagacttggagaagatggaggctgaccccgagggc
cagcagacagacaaggcagaggagaaggaggaggcagacaagcctggtgagctcacagag
cgctccttggagagtgaaacaacaaagagcgaggcaccggacacagcagacaggcaagaa
acagatgttgaaggaggagaagacagcaaaatggacaaggacaaggaagaaagttcggag
aacacagaggggcagaaggaatccgaggccgaggacaccgggaggagaaatgagccagag
ctgggggagggtaacatcgccactgcagcagctgccgccctggcctctgctgccaccaag
gctaagcacctagctgctgtggaggagcgcaagatcaagtccctggtggcactgctcgta
gagacacagatgaagaagctggagatcaagctgagacactttgaggagctggagaccatc
atggaccgggagaaggaagcgcttgagcagcagagacagcaactcctcacagagcgtcag
actttccacatggaacagctcaagtatgctgagctgaaggcacgtcaacagatggagcag
cagcaggctgctgcccagaaccctggaggcctccatggtccacctgctagcatgcatgga
cccccgccccagggcttcaaccccatgcatcaccccatgggcagccaccaccctcctcag
acagtagggccgatgccaggacgtatgatgcccggagggcctccgacctccaacatgcca
ccagtgatgggcaccaggcactcgggtgccccaaatggcatgtacccagtcccaccccct
tcacagtccgatgggatagcctccacccctgctggagctccagtggctggaccagtccgt
acggtgcctgagaattaa
DBGET
integrated database retrieval system
