Scleropages formosus (Asian bonytongue): 108928099
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Entry
108928099 CDS
T04919
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase DTX2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108928099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108928099
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108928099
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108928099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-UDP
zf-RING_2
WWE_5
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108928099
NCBI-ProteinID:
XP_029105222
LinkDB
All DBs
Position
25:complement(8133593..8151588)
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AA seq
617 aa
AA seq
DB search
MAAASGSAPADSGSWSGPPGPPPAPPPPPPVPPVPGVPLAGQGPPAVAVWEWQDDQGLWR
PYSGQVSAYIEQCLSGQRGARAAGPAATSIPLGHAEPGLAPYIIDIPSLKQFRQDTGKMR
SVRRSLFPPSSILGSGMYWEWANDEGGWTPYEMRTSIMLEHGYQARQVAVDLGPQGYNYV
VDLRAMAQVNRASGYQRQVRRRIGQPYPPAVPAPASVIHSGPACSCQQCLGGGAGAGSGG
GPVPSRSRHSFSSGQAGRPTSQGPVRAPSSSPASVYSPYPRRPLSVGGTAWGGPWTPATS
SGASNFSSHSSSLSIPTVPVQMNGSTSVSSALAGMASILMSAAGLGVRLTSAPLPQRLPS
RPTKAHGNVRSAKKHRTELKPVEVIQKYMEKVTLPPEEDCIICMERLSGPSGYSDSPEEQ
AVTADSVGKFTKCGHTLHLLCMLAMYNNGNKDGSLQCPSCKTIYGEKTGTQPKGKMEIYN
IPQPLPGHPDCGTIQIIYNIPPGIQGPEHPNPGQPYTCRGFPRLCFLPDNEKGRKVLELL
KVAWSRRLIFTVGTSSTTGEADTVVWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSELASQ
GVTEDCLRSVGQNQGAS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcgtccggttcggctccggcggacagcgggtcgtggagcggcccgccagga
ccaccgccagcgccgccgccgccaccacccgtcccgccggtccccggcgtccccctagcg
ggccagggaccgcccgccgtggcagtgtgggagtggcaggacgaccagggcctgtggcgc
ccctacagcggccaggtgagcgcctacatcgagcagtgcctttcgggacagcgaggggcc
cgggctgccggacccgcggccaccagcatccccctggggcacgcggagcccggcctggcg
ccctacatcatcgacatccccagcctcaagcagttccgccaggacacggggaaaatgcgc
tccgtacgtcgcagcctgttccccccgtcctctatcctgggaagtggcatgtactgggag
tgggcgaacgacgaagggggctggacgccttacgagatgcgcacctccattatgctggag
catggctaccaggcacggcaggtggctgtggatctcggtccccaaggctacaactacgtg
gtggacctgcgggcgatggcgcaggtgaacagggcctccggctatcagcggcaggtgcgc
aggcgcatcgggcagccttatccaccggccgttccggcccccgcctcggtcatccactcg
ggtccagcctgctcctgccagcagtgcctgggtggaggtgcgggcgccggcagcggcggt
ggacccgttcccagccgatcgcgccactccttctcttcggggcaggcaggccggcccact
tcgcaggggcccgtacgggctccaagtagcagccctgcctcggtctactccccgtacccc
cgaaggccgctctctgtgggtggcacggcctggggggggccgtggacgccggccacctcc
tccggagccagtaacttctccagccatagcagcagcctcagcattccgacagtcccggtg
cagatgaacgggtctaccagcgtgagctcggctctagcaggcatggcttccattttgatg
tcggcagcgggacttggagttcgcctcacgagcgcccccctcccgcagcgcctcccgagc
aggcccaccaaagcgcacggcaacgttaggagcgcaaagaaacacaggacagagctgaaa
ccagtggaggtgatccagaagtacatggagaaagtgactctcccccccgaagaggactgc
attatttgtatggagcgtctctccggaccctcgggctacagcgactcgccggaggaacag
gccgtcacggccgacagcgtgggcaagttcacaaagtgtggacacacgctgcacctgctc
tgcatgctggccatgtataacaatggaaataaggatggcagcctccagtgcccctcctgc
aagacaatctatggtgagaagactgggacacagcccaagggcaagatggaaatctacaat
atccctcagccgctgcctgggcaccctgactgcggcaccattcagatcatatacaacatt
ccgccagggatccagggcccggagcacccaaacccaggccagccctacacctgccgagga
ttcccacgcctctgcttcctccctgacaatgaaaaaggacgaaaggtgctggagttgctg
aaggtggcctggagccgtcgacttatcttcaccgtggggacgtccagcaccaccggggag
gctgacaccgtggtgtggaatgagatccaccacaagacagagatgatgtccaacgtgtcg
ggtcacgggtacccagatcccaactacctggacaatgtgctgtctgagctggcctcccag
ggggttactgaagactgcctcagatctgttggacaaaaccagggggcatcatga
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