Scleropages formosus (Asian bonytongue): 108928287
Help
Entry
108928287 CDS
T04919
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108928287 (ddx20)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108928287 (ddx20)
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108928287 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
108928287
NCBI-ProteinID:
XP_018597686
UniProt:
A0A8C9RGU1
LinkDB
All DBs
Position
25:complement(1975452..1986831)
Genome browser
AA seq
781 aa
AA seq
DB search
MAAHVRRTAHDVDARVRTGDVLSAEAVDFGSLLLSGPVLEGLRAAGFQRPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFATIALDSLIVENVSTQVLVLAPTREIAVQIHSVITTIGS
CLKGLECHVFIGGTPVSQDRARLKRCHIAIGSPGRVKQLVELGFLSTASVRLFVLDEADK
LLEEGSFQEQINWIYSSLPPSKQMLALSATYPESLAQHLARYMTDPTFVRLNPTDPSLIG
LKQYYRLVRSHPLPHKVFEEKVQHLFELFSKVPFNQALVFSNLHSRAQHLSDILSQKGLP
AACISGSLSQDQRLEAMAKLKQYQCRVLISTDLTSRGIDAEKVNLVVNLDVPQDWETYMH
RIGRAGRFGTHGLAVTYCCHGEEENKMMAIAQKYNLNLSCLPDPVPPGLMEEPCDWDVTV
ENLKMGPTFKALAGAERKKKRVKSDAFLPPVTAKAEGFEDSTDLQTRGSPKKTIRNSEEG
SRKAAGKQHRKLSLATDVLPPREVSVPVAPVPEKETPNLPTIPPLLSFKARTRTPMSFEE
AVADYESFITNGLGRTVEVVLQFTGPRNMTCDEKPEHLLQPDVQQTDSELEEDERGDGER
RNSCSSTSCSSSLSTGGASDSHSHTEDEMEVPSPQTHQLQAESVTLQTTVTSNSGLNPLA
QGQQGDPSQNSAPSSHWSHPQSQLCPKEATPQHPWRGHPCKKSKRSRCKPKREQQEMEEH
DDKKREDPDGGFQQYWQACYQAWDEYYTTVARNSQQSYNMAYSWMAAYRMNAVYMQELLK
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacgtgaggagaacagcgcatgatgtggatgcgcgggtgcgaaccggcgac
gttctgtctgcggaggcggtggatttcggctccctgctcttgtctggtccagtgctggag
ggcttgcgggcggccggtttccagaggccctccccgatccagctgaaggccatcccgctc
ggccgctgcggcctcgacctcattgttcaggccaagtctggcacagggaagacctgtgtg
tttgccaccatcgccctggactccctcattgtggagaatgtgagcacacaggtccttgtc
ctggcgcccaccagagagatcgcggtccagatccattctgtgatcaccacaattggcagc
tgcctgaagggcctggagtgtcacgtgttcatcgggggaaccccggtgagccaggacagg
gcgcggctgaaaaggtgccacatcgctatcggctccccagggcgtgtcaagcagcttgtc
gagttgggcttcctgtccacggccagcgttcgcctctttgtccttgatgaggcggacaaa
ctgctggaggagggcagcttccaggagcagatcaactggatctactcctccctgccaccg
agcaagcagatgctggccctttccgccacgtacccggagtcgctggctcagcacctggct
cgctacatgacggaccccactttcgtcaggctcaatcccactgacccaagtttgataggg
ctgaagcagtactatagactggtaaggtcccacccattgccccataaggtctttgaggag
aaggtgcagcacctgtttgagctcttcagcaaggtgcccttcaaccaagcactagtcttc
tccaatttgcacagcagggcacagcacctgtctgacatcttgtcgcagaagggcctccct
gccgcgtgcatctcaggcagcctgagtcaggaccagcggctagaggccatggccaagttg
aaacagtatcagtgtcgtgtgctcatctccactgacctgacctccagaggtattgatgct
gagaaggtgaacctggtggtcaacctggatgtcccccaagactgggaaacctacatgcac
cgtataggacgggcaggtcgcttcggtacccatggcctggctgttacctactgctgtcac
ggggaggaggagaacaagatgatggctattgctcagaagtacaacctgaatctttcatgc
ttgccggatcccgttcctcctgggttaatggaagaaccatgtgactgggatgtcacggtg
gagaacctcaagatgggaccgacctttaaggccttggctggagcagaaaggaagaaaaaa
cgggtaaagtctgatgccttccttccaccagtgacagcaaaggcagagggctttgaagat
agtactgaccttcagacacggggcagccccaaaaagaccataaggaattcagaagaaggg
tcaaggaaagcagctggcaaacagcacagaaagttgagcctcgccactgatgtcctgcct
cctagagaggtatcggttccagtagctccggtacctgaaaaggagactccaaacctgccc
acaatccctccgctgctgtccttcaaagcgagaacacgcactcctatgtcctttgaggag
gctgtggctgattatgagagcttcattaccaacggccttggccggactgttgaggtggtc
ttgcagttcaccggcccaagaaatatgacctgtgatgaaaaaccagagcatctcctccag
cctgatgtccagcagacagacagtgagctggaggaggacgagaggggggatggtgaaagg
aggaactcttgttcttcgacctcttgcagctcttcactgtctactgggggggcatcggac
tcacactctcatacagaggacgaaatggaggtccccagtccacaaacacatcagttgcag
gcagagagtgttaccttgcagacaactgtgacttccaactcagggttgaacccattggcg
cagggccagcaaggtgacccgtctcaaaattcagctccatcttcccactggtcacatccc
cagtctcagctttgtcccaaagaggccacccctcagcacccttggagaggacacccatgt
aagaagtctaaacgtagcagatgcaagcccaaaagggagcagcaggaaatggaggagcac
gatgacaagaagagggaagatccagatggaggtttccaacagtactggcaggcctgttac
caagcctgggatgagtactatactacagttgccaggaactcccaacaaagctacaacatg
gcttacagctggatggcagcgtaccgaatgaacgccgtctacatgcaggagctgcttaag
cactag
DBGET
integrated database retrieval system
