Scleropages formosus (Asian bonytongue): 108928314
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Entry
108928314 CDS
T04919
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04137
Mitophagy - animal
sfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108928314
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108928314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108928314
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108928314
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108928314
Multi subunit type E3
ERAD complex
108928314
LMBR1L-GP78-UBAC2 complex
108928314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_4
Prok-RING_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
108928314
NCBI-ProteinID:
XP_018597714
LinkDB
All DBs
Position
5:31151889..31170943
Genome browser
AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTAGSAALLVASVLSAYNALSQPPGPGHGDLPGDGEPPVLVLRH
LGGGLVSHVFWHLVSDSLFVWVLVNTACCLLMLLAKAIQCLVFGPLRVSEKQHLKDKFWN
FVFYKFIFIFGVLNVQTVEEVVMWCLWFAVLIFLHLMVQLCKDRFEYLSFSPTTPMSSHV
RVLTLLGSMLLCGCGLALLCALVGPAYGMHTVSFMAAECLLVIVRTAHVIMRYSFHLWDL
NHEGTWENKGTYVYYTDFIMELALLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHE
VQRRIRRHKNYLRVIDNMESRFAVASPEELAANNDDCAICWDSMQTARKLPCGHLFHNSC
LRSWLEQDTSCPTCRMSLNINEGSRARDDQQREPLDDNIVPGPGAEPHPHLNQHNHFFHF
DGSRIASWLPSFSVEVMHTTHLLGIAQANNSQLNAMAHQIQEMFPQVPFHLVLQDLQLTR
SVEITTDNILEGRIQVPFPTQVATPVTSVEELPGASGGAEPVPREDVEVRGSRFSKSAEE
RQRMLVQRKEEMLQQARRRFLNRSPEGDEEEEEEEGGEEGEDGLPALEVDNVARGLDHIA
LRRRMLAAAAERRIQRRQDTPQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcctgttcctggagcgcttcccctggcccagcctgcggacctacacagccggg
agcgccgccctgctggtcgccagcgtgctcagcgcgtacaacgccttaagccagccgccg
ggcccggggcacggagacctccccggggacggagagcctccggtgctcgtgctgcgccac
ttgggcggcgggctcgtctcccacgtgttctggcacctggtctccgacagcctcttcgtg
tgggtgctggtgaacacagcttgctgcttgctgatgctgctggccaaggcgatccagtgc
ctggtgttcggtcctctgcgagtcagcgagaagcagcacctgaaggacaaattctggaac
tttgtcttctacaagttcatcttcatctttggcgtgctgaatgtccaaaccgtggaggag
gtggtcatgtggtgcttgtggtttgccgtactcatcttcctgcacctcatggtccagctg
tgcaaagaccgctttgaatatctctccttttcacccaccacacccatgagcagccatgtg
cgcgtgctcaccctactgggctccatgctgctgtgcggctgtggcctggccttgctgtgc
gcgctggtgggaccagcgtacggaatgcacacggtgtctttcatggctgcggagtgtctg
ctggttattgtccgtactgcccatgtcataatgaggtattcattccacctgtgggatctg
aaccacgagggaacctgggaaaacaagggcacatacgtgtactacactgacttcatcatg
gaattagcccttctgtctctggatctgatgcaccacatccacatgctgctgtttggcaac
atctggctctcaatggccagtctggtgattttcatgcagctgcgttaccttttccacgaa
gttcagcgtcgcatccgacgccacaagaactacctgcgtgtcattgacaacatggagtcc
aggtttgctgtggcttcccctgaggagctagctgccaacaacgatgactgtgccatctgc
tgggactccatgcagacggcgcgcaaactgccctgcggacatctcttccacaactcatgc
ctgcgctcctggctagaacaggatacttcctgccctacctgtcgtatgtccttgaacatc
aatgagggcagcagggcacgtgacgaccagcagagggagcccttagatgacaacatagtg
cctggacctggtgctgagccccacccccacctcaaccagcataaccacttcttccacttt
gatggctctcgcattgccagctggctgcccagtttctctgtggaggtcatgcacaccacc
cacctgcttggcatcgcgcaggcaaacaactcccagctcaatgccatggcccatcagatc
caggagatgttccctcaagtgcccttccatctggtactccaggacctgcagctcacacgc
tcagtggagatcactacggataacatcctggagggacgaatccaagtgccctttccgaca
caggtcgcaaccccagttacttccgtggaggagctgcccggggccagcggaggcgcagag
ccggttccaagggaggatgtggaagtccggggcagtcgcttctccaaatcggctgaggag
aggcagaggatgcttgtgcagaggaaggaggagatgctacagcaggcacgcaggaggttc
ctgaacaggagccctgagggagatgaggaggaagaggaggaggaggggggcgaggagggg
gaagatggcctgcctgctctggaggtcgacaatgtggcccgtggcctggatcacatagcg
ttgcgacgacggatgcttgcagcggcagcggaacgccggattcaaaggcgacaggacact
ccccagtga
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