Scleropages formosus (Asian bonytongue): 108928409
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Entry
108928409 CDS
T04919
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108928409 (chd6)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108928409 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
CHDCT2
HTH_CHD1_Hrp3
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
108928409
NCBI-ProteinID:
XP_029103650
UniProt:
A0A8C9TLU7
LinkDB
All DBs
Position
22:14161990..14207029
Genome browser
AA seq
2867 aa
AA seq
DB search
MKIQKKDKQMSTTQILKHTSSSVASSSTDQNAQNPFPSSPLGLQEQTRAPGGLTNHCMAH
AKQAGSGEPGPGAGRPSPSPLSLPLNGEEDDGGGGGARVKKKRKKKDKKEVDFWQKSEKE
TRPKKKKEVSEGKELLPRKSKELKKVKELKPPKESKKGRKSREAKARPKLKATRDGKSGM
SSPKQRGRKAKEQGPLPLEKKKKGKRKSEALQEMCESDESASLCTLAAGNEESSDAPEST
KRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGTGRIQAFSSTSLAWQSEEPPEDEANII
EKILAVRTVKKEPSQGEQPLELEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRN
KQAQMKHIFTEPDEDLFNPDYIEVDRLLEVAYTTDTETGEEVTHYLVKWCSLPYEESTWE
LQEDVDPAKIREFEDIKKIPELKHVERPLPEQWKKLEQSREYRNGNQLREYQLEGMNWLL
FNWYNRKNCILADEMGLGKTIQSITFLYEIFSMGIKGPFLIIAPLSTITNWEREFRTWTE
MNVIVYHGSQISRQMILQYEMYHKDEQSNPLPGMFKFHGVITTFEMIMADCPELKKIHWR
CVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSET
SFLEEFGDLKTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRA
ILEKNFTFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILEGFKKMHNPDAWDF
QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV
RGNLRQAAIDRFCKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC
HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGLNGVQQLTKMEVE
DLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQTEGKGSTFAKASFVSSGNRT
DISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEEDELMEFSELDS
DSEERPCRTRRLSERNRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLSERDMELL
CRALLVYCVRHYKGDDKIKSFIWDLITPTKDGQNEALQNHSGLSVPVPRGRKGKKLKNQL
CQPELKNADWLVHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVEVLGEAANQALE
GIPASKLEVALPDIDYLEIPASWWDTEADKSLLIGVHKHGYERYNAMRADADLCFLERVG
MPDVTALSVEQSGGETSADATDSVCKSDDVKDESEGKVEATGDKEPTEEETATYNEISDK
SENAVPVVMVQDNMEQGRAVWPTGSALTARLRRLITAYQRFTRREPLRHDFLMPEGAGPM
AWQLGEEFRRRVTEPDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPEKKAFDWTQFRSF
ARLERKTDESLERYFCSFVAMCRTACRLPPRKDEGPLDPTLFVEPITEERAARTLYRIEL
LRKVREQVLRHPLLGQRLQLCQPSLYLPVWWECGKHDRDLLIGVARHGLSRTDYYILNDP
QLSFLEAHRNYVQKENRGFPSTALHHHHHHHHHCCLYEAGLSHCHSPQPAEFHPSSSHHT
QAHIHSHIHTPSEVVGANTGSHLGVGTTAREGYLDCPSLDESLDLNSLQHDSLTSDSLHG
KPTKEALNGFPFNSVSGGQNMLNSYGVQGELNGSQGDMDPIPGKLRSDVLVGEQYPCEDT
GLIAPSVELDELQAPWESTDHTSTSDMFNESDAILGPSSLEPEFLDTGQPGESRVDGALT
DCLSMPSSDSQSNTVEPLQPSFMLFKDIADTEPAVEQNDLSASPSEYVPPPISLSDMSLH
HQRGPDEPEEKLSDSDVTHSVPSPGDVAESVTFEFDKEELSRDSQSLAGPEPDPEVDPDP
EASRELSEEQGNVGDAANAGDMADESTLSEHTFAADEPASPSLPVPQADTPVSSGTEVVS
QFKQEFSLEPLSSDSKPDALEAESTVASPSMEQTGMLEVKDEIKEERPKSPALLEGSYVE
ESRFTAPLSVCEMTESLPEVREPTIAHLLQEKALYSFSEWPKDRVIINRIDSICHAVLKG
KWPSSQQYESPSSLGNTCVPNSAPPRAAYIPARVQPQQNLNFSISAPVSHLPKESLVGVP
FLAELKRGRRGLEFEGEAPGKSCPSVEKIPVGMPHRGGALLLNGWQDAAMDLSKAGELGM
AHAGHTGPHKLPPLNSLPGSLGLDMAGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRR
RNVDGADVGFVKNQDLHVPEVQSRPEGVNQSTVSVPSSSAPPEHPPVPPQPESLPLDRET
ANKGLLEWLRQNPNYTMEMPPFSTPQSVGILHSFVDRPKQRRHRCKDPSKLDVNSLTGEE
RVPVVHRATGRRLGGAMAPALKELSRWLDANSDYCVAPDWADIVKHSGFLPEGKFTRILT
EPVCRDSGPRKRGRRPRNDMPKVGAMLSEAHSSMGPLFMNGLIGNMDLMGLRNMPSIPLT
GLMGFPHGFAAVPAGEDAKNGLSMLPMMLHGMQPHVFSVGGLMSQSATAGTPTPTTAVSS
AAASPASSSDLAVTGASAEGEPTSSEADAETKKEDKPLVEGKAGPAHSHGEPAIVLGTNS
SGGSSGSGGGSGSHLAFNPFLIPGMSHGLLYPHMFLPHGGIMALPSMPHADSSGSPKRKK
KKLREEGAEEAGVKGSPQTDSVRLRVASDSQTDTRESPVAGSEWQTGGGVEANTDPPPHT
PPGAMPEEGPAETNVAVEMVQKAASPAEGEKQDEEQQEEAGKEREST
NT seq
8604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacaaaagaaagacaaacagatgtctaccacccagatattaaagcacacttca
tcctcagtagcttcttccagcactgaccaaaacgcacaaaacccgtttcccagcagccca
cttggcttgcaggagcagacgagggcccccggtgggctcaccaatcactgtatggcccac
gctaaacaggctggctctggggagccgggtcccggcgcaggccgcccaagcccctcccca
ctgtctctgccgttaaacggggaggaggatgatggaggcggaggaggtgctagagtcaag
aagaaacggaagaaaaaagacaagaaagaggtagacttctggcagaagtcagagaaggaa
accagaccaaagaaaaagaaggaggtgagcgaaggcaaggagctgctcccacgcaagtcc
aaggagttgaagaaggtgaaagagctgaagcccccaaaggagtctaagaagggaaggaag
tcacgagaggcaaaggcccgtcccaagcttaaggctacacgtgatggaaagagtggcatg
tcgtctccaaagcagcgtggacgcaaggcaaaggaacaaggtccattaccattggagaag
aagaagaagggtaagcggaaaagcgaggccctacaggagatgtgtgagagtgacgagtct
gcatccctttgcacgctggcagcagggaatgaggagagcagcgatgccccagagagcacg
aagcgtcgctctgggcggcaggtaaagcggcgaaagtacaatgaggatttggacttcaag
gtggtggatgatgatggggagaccattgctgttctgggtactgggaggatccaggcgttt
tcctccaccagcctggcctggcaatctgaggagccccctgaagatgaagccaacattatt
gagaagattctggctgtgcgaactgtaaagaaggagccgtctcaaggagaacaacccctg
gagttggaggaattctatgtcaagtacaggaatttttcctacttgcactgtaaatgggca
actctggaggagctggagaaggatccccgcatccatcagaaaattaaacgcttcaggaac
aagcaggcacagatgaagcacatttttacagagccggatgaggacctgtttaacccagac
tatattgaggtggaccgactccttgaggtggcctacactactgacacagagactggcgag
gaagtgacccactacctagtgaagtggtgttccctgccctatgaggagagcacctgggaa
ctacaggaggatgtggacccagccaagatccgggagtttgaggacataaagaaaatccca
gaactgaaacatgtagagagacccctccctgagcagtggaagaagctggagcagtcacgg
gaatacaggaatggcaaccagctgcgcgagtaccaactggagggcatgaactggctgctc
ttcaactggtacaacaggaagaactgcatcttggctgatgagatgggcctgggaaagacc
attcagtctattacgttcctgtatgagattttctcaatgggaataaagggtccattcctc
ataatcgccccactctctaccatcaccaactgggagcgcgagttccgtacctggacggag
atgaatgtcattgtgtaccatggcagccagataagccgccagatgatcctgcagtatgag
atgtatcacaaagatgaacagagtaatcctctgcccggcatgtttaaattccacggggtg
atcaccacctttgagatgataatggctgactgccctgagctcaagaagatccactggcgc
tgtgtggtcatcgatgaggctcacagacttaaaaaccgcaactgcaagctgttggagggc
ctgaaacttatgaacctggaacacaaagtgctgttgacgggtacaccgctgcagaactcg
gtggaggagctgttcagtctgctcaacttcctggagcccctgcagttcccttcagagacc
agcttcttggaggagtttggggacctcaagacagatgagcaggtgaagaagctgcaggca
atcctgaagcccatgatgcttcggaggttgaaggatgatgtggagaagaaccttgcaccc
aaagaggagaccatcatcgaggtggagctcaccaacatccagaagaagtactaccgtgcc
atcctggagaagaacttcaccttcctggccaagggggccaaccagcacaacatgcccaac
ctcatcaacactatgatggagctccggaagtgctgcaaccatccttacctgatcacaggt
gctgaggaaaagatccttgagggcttcaagaaaatgcacaaccctgatgcctgggacttc
cagctgcaggccatgatccaagcagcaggcaagctggtcctgattgacaagttgctgcca
aagctgatcgctggtgggcacaaggtgttgattttctcacagatggtgcgctgtctggac
atcctggaggactacctcattcagaggaggtacacatatgagcgcatcgacgggcgtgta
agagggaacctgcgtcaagctgctattgaccgcttctgcaaagtggattccgaccgcttt
gttttcctgttgtgtacgagagctggaggcctgggaatcaacctgactgctgcggacacc
tgcatcatcttcgactcagactggaatccacagaatgacctgcaggctcaggctcgctgt
caccggattggccagagcaaagcagtgaaggtgtaccggctgatcactcggaattcctac
gagagggagatgtttgacaaagcgagtctgaaactggggctggacaaggctgtactgcag
gacatcaatcgcaagggcggcctcaatggggtgcagcaactgaccaagatggaggtggag
gacctgctgcgaaaaggggcctatggggcactgatggacgaagaggacgagggctctaag
ttctgtgaggaagacattgaccagatcctgcagcgccgcactcagaccattaccatccag
acagagggcaagggctccacctttgcaaaggccagctttgtatcatctggaaacagaaca
gatatttctctggatgacccaaacttctggcaaaaatgggccaaaatagcagagttggag
attgactccaaagcagagaaggagagcctggtgatcgacaccccgcgggtaaggaagcag
acacgacactacaactcatttgaggaggacgaattgatggagttttctgagctggacagc
gactcggaggagaggccctgccgcacacggcgacttagcgagaggaaccgccgctacttg
cgtgcagaatgtttcagggtggagaagaacctgctcatatttggctggggccgctggaag
gacatcctgacccacggacgcttcaagtggcacctttcagagcgggacatggagctgctg
tgccgggcacttctggtctactgtgtgcgccactacaagggtgatgacaagatcaagagc
ttcatctgggacctcatcacacccaccaaggatggccagaatgaagctctgcagaaccac
tctggcttatctgtccctgtgccccggggcaggaagggcaagaagctgaagaaccagcta
tgccaaccagagctaaagaatgcagactggctggtccactgcaaccctgaggtggtcctt
caagacgacagctataagaagcacctcaagcaacactgcaacaaagttctgcttcgggta
cggatgctctattacctgaaagttgaggtccttggagaggcagccaaccaagccctggag
ggcatccctgctagtaaactggaagtggccttacctgatattgactacctggagatccca
gcaagctggtgggacacagaggcagacaaatctcttctcataggcgttcacaagcacggc
tatgagcggtacaacgccatgcgggcggacgcagacctttgctttctggagcgggtcggt
atgccagatgtcacagcactgtcggttgagcaaagtggtggagagacatcagctgatgcc
acagacagtgtctgcaaaagtgatgatgtcaaagatgagtctgagggcaaagtggaggca
acaggggacaaagagccaactgaggaagagacggcaacgtataatgaaatctcagacaaa
agtgaaaatgctgttccagtggtgatggttcaggacaatatggaacaaggccgggctgtg
tggcccacgggctcggccctcactgcaagactacgaagactcattactgcttaccagcgc
ttcacccgccgggagcccttgaggcatgatttcctgatgcctgagggggcggggcccatg
gcatggcaactgggggaggaattccgccggcgagtgacagagcctgaccccctgttcctg
gagtggcagaggaggtggactcgacgtgagcaggctgacttctaccgcactgtgtcctca
tttggagtggtgtatgacccagagaagaaggcctttgactggacacagttccgctccttt
gcccgtcttgagaggaagaccgatgagagcctggagcggtacttctgtagttttgttgct
atgtgccgcacagcctgcaggcttcctccccgcaaggatgaagggcccctagatcccact
ctgtttgtggagcctataacggaagagcgggccgctcgtaccctgtaccgtattgagctg
ctgcggaaggtgcgtgagcaagtcttacggcaccccctgctgggccagcggctgcagctc
tgccagcccagcctatatctgcctgtgtggtgggagtgtggcaagcatgaccgtgacttg
ctcattggggttgctcgtcatggtttgagccggaccgactactacatcctcaacgaccca
cagctgtccttcctggaggcgcacagaaactatgtacagaaggagaaccggggattcccg
tcaactgccctacatcaccaccaccaccaccatcaccactgctgtctgtatgaggcgggc
ctcagccactgccactccccgcagccggcagagttccacccaagctctagccaccacact
caagcccatatccattcacacattcacacaccctctgaggtggtgggagccaacacgggc
agtcacttgggggtggggactacagccagggagggttacctggactgcccctccttggat
gagtctctggatttgaattcccttcagcatgacagcctgaccagtgactccctgcatggc
aaacccaccaaggaggccctgaatggcttccccttcaactcggtctcaggcggacaaaac
atgttgaactcatatggtgtgcagggagagctgaatggcagccagggggacatggacccc
atccccggcaagctgcgcagtgacgtgctagttggggaacaatacccctgtgaggacact
ggcctaattgcaccctcggtcgagctggatgagctgcaggccccctgggaaagcacagac
cacaccagcacttctgacatgttcaatgagtcagatgctatccttggtccgtcctctctg
gagccagagttcctagacactgggcagcctggggagagcagagtggatggggcactgaca
gactgcctgagcatgcccagctctgactcccagagcaacacagtggagccactgcagccc
agcttcatgctgttcaaggacattgcggacacagagcctgctgtggagcagaatgaccta
tctgccagcccatcagagtatgttccgccccccatctccctctcagacatgagcctccac
catcagcgtgggccagatgaaccggaggagaaactgagtgactcagatgtcacccatagc
gtgccaagccccggtgatgttgcagagagcgtcacctttgagtttgacaaggaggagctg
tcacgtgacagccagagcctggcaggcccagaaccagacccagaagtggacccagatcca
gaggcttcaagggagcttagtgaggaacagggaaatgtgggtgatgcagccaatgcaggt
gacatggctgatgagagtacgctcagtgaacatacgtttgccgccgatgaacctgcatcc
ccatcgcttcctgtcccgcaggcggacacccccgtgtcctccggaactgaggtggtctcc
cagttcaaacaggagttctctttggagccactcagctcagacagtaagccagatgcactg
gaagcagagagcactgtggcgtccccctcaatggagcagacaggtatgctggaggtgaag
gatgagatcaaagaggagagacccaagagtccagctttacttgaggggagttatgtagaa
gaatcacgtttcacagcccctctgtcggtgtgtgagatgacggagagcctgcctgaggtt
cgagagcccaccatcgcccatcttctgcaggagaaagccctgtactccttctccgagtgg
cccaaggatcgagtgataataaatcgcattgacagtatctgtcatgctgtcctaaagggg
aagtggccctccagtcagcagtatgagtctcctagctctctaggaaacacctgtgtaccc
aacagcgcccccccaagggctgcctacatccctgcaagagtgcagccacagcagaatctt
aacttcagcatttccgctcctgtctcccatctccccaaggagagcctagtgggtgtgcct
ttcctggctgagctgaagcggggccgacgtgggttagaatttgaaggagaggctcctgga
aagtcttgtcctagtgtagagaagatcccagtaggcatgccacaccgtggtggggccctg
ctcttgaacggctggcaagatgctgcgatggacctgtcaaaggctggggaacttgggatg
gcccatgctgggcacactggccctcacaaattgcccccgttgaactccttgcctggttca
ctgggtctggatatggctggcatactgcaagctggtctgatccaccctgtcactggtcag
attgtcaatggtagcctacgacgggatgatgcagccatgcgcaggagacgaggccgacgg
agaaacgttgatggggctgatgtgggttttgtcaagaaccaagatcttcatgtcccagaa
gtgcagagcagaccagaaggcgtcaaccagtcaacggtgtcagtcccatcctcgtcggct
ccaccagagcaccctcctgtgcccccgcagcctgaaagcctcccgcttgatcgtgagaca
gccaacaagggcttgctggagtggctgcggcagaacccaaactacaccatggagatgccg
cccttcagtactccccagagtgtgggcatcctgcacagctttgtggacagacccaaacag
aggaggcatcgttgcaaagaccccagcaagctggatgtcaactcccttacaggagaggag
cgagtgccagtggttcacagggcgacaggccgcaggctggggggtgctatggcaccagct
ttaaaggagctctctaggtggctggatgctaattcggattactgtgtggcccctgactgg
gctgacattgtgaagcactcgggatttctaccggagggtaagtttactcgtatactaact
gagccggtgtgccgagactcagggcctcgcaaaaggggccggagaccccggaatgatatg
cctaaggtgggagccatgctgtcagaggctcactctagtatggggcccttgttcatgaac
ggactgatcggaaacatggacctcatgggcctgcggaacatgccgagtatcccactcacc
ggtctcatgggattcccccacgggtttgcggctgtgccggctggagaggacgccaagaat
ggcctgagcatgcttcccatgatgcttcatggcatgcagcctcatgtgttcagtgtgggt
ggactcatgagccagtcggccacagcgggtactccaacccccaccacggcggtgtcttct
gctgcagcaagcccggcaagcagctctgacctggcagttacaggcgcctctgctgagggt
gagccaaccagctcggaagctgatgctgagacaaagaaggaggataagcccctggtggag
ggcaaagctggcccagcccacagccacggggagcctgccatcgtcttaggaactaacagc
agtggtggcagtagtggcagtggtggcgggagcggaagccacctggccttcaacccgttc
ctaattccagggatgtcccatggactgctgtacccacacatgttcctccctcacggtggt
atcatggcactgcctagcatgccccatgcagacagctctggcagcccaaagaggaagaag
aaaaaattacgtgaggaaggagcagaagaagctggtgtcaaaggcagcccgcagactgac
agtgttcgtctgagagtggccagcgacagtcagactgatacaagggagagccctgtggca
gggtctgagtggcagacagggggtggggttgaggccaacacagacccgcctccccacaca
cctccaggagcaatgccagaggagggtcctgcagagacaaatgtggctgttgagatggtc
caaaaggctgcaagccctgcagaaggggagaaacaagacgaggaacagcaggaagaagcg
ggaaaggaaagagaatcaacatag
DBGET
integrated database retrieval system
