Scleropages formosus (Asian bonytongue): 108928738
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Entry
108928738 CDS
T04919
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04137
Mitophagy - animal
sfm04140
Autophagy - animal
sfm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108928738
04137 Mitophagy - animal
108928738
04148 Efferocytosis
108928738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108928738
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108928738
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
108928738
NCBI-ProteinID:
XP_018598326
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Position
10:complement(19145897..19164412)
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AA seq
628 aa
AA seq
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MFNKKRKRPSLEQRKVRSRDAARSRRSQETEVFYQLAHTLPFPRRVVSDLDKAAIMRVTL
SFLRIHSLFHSGEVKVEPSAEEEEEAIDRFYPRALAGFIMVLTEEGDMVFLSESVNKYVG
ITQLELLGQSVYDFVHPCDQEELRDVLTPRPGLSKKKQADQRSERNFFLRMKSTLTNRGR
VVNLKSAAWRVLRCSGHMRTYHAADKTGPPIGNFLILLCEPIPDPSGVEFPLDCSAFLSR
HSTDLRFIDCDDRVTQLVGYQPEDLTGRSAYEFHHALDSDHMTKSLHILFSKGQVCTNQY
RFLAKSGGYVWAETQATVTYNSKTSQPEAVVCLNFILSGVEHADVVFSMEQTPSLKKPKT
EPEEKEEVGKGACAELLNLKELSEEVPQSSPTPGDVAVSKTESVEPKNLSFYRPPSPNTV
PEFPQELCTPDLRQLLSPIFDRPEAASVVSKCSGEDQFMDKDSVEKFFTFKPVDTNQEST
AEGTESMDLDMLAPYISMDDDFQLTFFTQLPESDLSSPESPVPGARKRALEDDVETSFRG
ILKDKRQRHTAVEEEVLLAPAKAWVCPEDAEPPDELEPVPHHNKLLTDRDPILGGVQELR
DPPALMSTMLSPQHDQPDLKKSSVKTLT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaaaaaagaaagaggccaagcttggagcagaggaaggtgcgctcacgggat
gcagcacggtcccgacgcagccaggagacggaggtgttctaccagctggcccataccctc
ccgttccctaggcgtgtcgtctccgacctggacaaggccgccatcatgagggtgacgctc
agcttcctgcgcatccacagtctcttccactcaggagaagtgaaggttgagccaagcgct
gaggaggaggaagaggcaatagacaggttttacccccgagctctggctggctttatcatg
gtgctcacagaagagggggacatggtctttctttcagagagtgtcaataaatacgtcggc
attactcagcttgaactgttgggacagagcgtgtacgattttgttcatccatgtgatcag
gaggaactgcgggatgttctgactccaaggccaggcctgtccaagaagaaacaggcagat
cagcggtcagaacggaacttctttctgaggatgaagagcacgctcactaacagaggccgg
gtggtgaacctcaagtctgctgcctggagggtactacgttgttcaggtcacatgcggact
taccatgcagcggacaagacggggcctcctattggtaacttcctgattctgctgtgtgag
cccatccccgacccctccggtgttgagtttcccctggactgcagcgccttcctgagccga
cacagcacggacctccgtttcatagactgtgacgatcgagttactcagcttgtgggatac
cagccggaggatctgactggccgatcagcatacgagtttcatcatgcattggactctgat
cacatgactaagagcctgcacatactgttctccaaaggccaggtgtgcaccaatcagtac
cgcttcctggcaaagagcgggggctatgtgtgggcagagacacaggccacggtcacctac
aacagcaagacgtcgcagcccgaagcagtggtctgcctcaacttcatcctcagtggggtc
gagcatgcggacgtggtcttctccatggagcaaaccccgagcctcaagaagcccaaaaca
gaaccggaagagaaggaggaggtgggcaagggggcctgtgcagaactcctcaacctgaag
gagctttctgaggaggtgcctcagtcgtcaccgacgccaggagatgtggctgtttccaag
acggagtctgtggagccgaagaacttgtcgttctaccggccgcccagtcccaacacggtg
cccgagttccctcaagagctgtgtaccccagatctgcggcagctgctttcgcctattttt
gacaggcccgaggcagcctctgtggtttcgaagtgttccggtgaagaccaattcatggac
aaagactcagtggagaaattcttcaccttcaaacccgttgacacgaatcaggagagtact
gcagagggtacagagagcatggacttggacatgctggctccttacatctccatggatgat
gacttccagctcaccttcttcacccagctcccagagagcgatttaagctccccagagtct
cctgttcctggagcacggaagcgggctctggaggatgatgtggagacatctttcaggggc
atactgaaggacaaaaggcaaaggcacactgcagttgaggaggaggtgctcttggcccct
gccaaggcctgggtttgccccgaggatgccgaacccccagacgagctggagccggtcccc
caccacaacaaactgctcactgacagggaccccattcttggaggagtgcaggagctccgc
gacccaccagccctgatgagtaccatgttatctccacaacatgaccaaccagatctgaag
aaaagcagtgtaaagactctcacctga
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