Scleropages formosus (Asian bonytongue): 108928989
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Entry
108928989 CDS
T04919
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108928989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108928989
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108928989
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
108928989
NCBI-ProteinID:
XP_018598764
UniProt:
A0A8C9RRC3
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Position
14:complement(19687226..19697114)
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AA seq
535 aa
AA seq
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MAGESSAADSSLVAGGANDPEEDEEQWLYGDESTKKQTEEAVTGFPDSNQESFLSNTDDK
DTAERAVKSDEDDDDSDSDDDDDVKVTIGNIKTGAPSYMAPPMNLSLKPGRGYGVNPAAK
LQSKGIDMEALGSINGLPVVEVDIDIFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQR
RLQLGLEPSAPLSSENKITVQQGRTAILEKETEPNAIKPDFKMDFPPPANILPAANRLKA
GPPPNRKLGGTIDVIGGQTGAIRRVEGRRREIHEQNPIQVLGDHANKTQPFVPPAGLPPP
PIGAPPPHFMHPPPPVSGMPPPLHPPGIPPPAIPGLFPPPMAPPPSLMMPPMDGRCPTSG
YNTRAPPPFGYNSSDSSFISYPPVSSSHSPWVPPLEKGSAGSSHWEYQGSRRDMERERDR
ERDRTPTTSEYSNEDERYHYYSHDRDYEREFHHGRERSRERSRERSRERDERHRDRRHRD
KEESSKHKSSKRKQHDGEEGEGHRRHKHKKNKRSKEDKEALEEVSGHREESEGKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagtcgagcgccgcggattcctctttggtggccggcggcgcgaacgacccc
gaggaggacgaggagcagtggctgtacggggatgagagcaccaaaaaacagactgaggag
gctgtgactgggttccctgattccaatcaagagagtttccttagcaacaccgatgacaag
gacactgctgaacgggctgtgaagagcgacgaggatgatgacgacagtgacagcgatgac
gacgatgatgtcaaggtcaccattggcaatattaagaccggagcaccttcatatatggca
ccaccaatgaacctgagtctaaaacctggacgaggttatggtgttaatcctgcagccaag
ctgcagtctaaaggaatcgatatggaagccttgggcagcatcaacgggcttcctgtggta
gaggtggacattgacatctttgaggacaaaccatggaggaagccaggtgctgacctctcc
gactacttcaactacggctttaacgaggagacctggaaggcgtactgcgagaagcagcgc
aggctgcagctgggcctggagcccagcgcccctctgagctctgagaataagatcacagtc
cagcaaggaaggacggctattttagagaaggaaacggagccaaatgccatcaagccggac
ttcaagatggacttcccccctcctgccaacatccttcctgctgccaacagacttaaggcg
ggacccccaccaaataggaagttgggcggaaccattgatgtgattggcggacagaccggt
gcgattcgacgggttgaagggcgaaggagagagatacatgaacagaaccccatccaggta
ttgggagaccatgccaacaagacgcagccgtttgtcccgccagcgggcctccctcctccc
ccgattggagctccccctcctcatttcatgcacccccctccaccagtctccggcatgccc
cccccgctgcaccccccagggattcctccacctgccattccaggcttgtttccccctccc
atggctccacccccaagtctaatgatgcctccaatggatggaagatgccctacctcgggg
tacaacactagagccccacctccctttggatacaactcctcagattccagtttcatcagc
taccctccagtgtcttcctcccattcaccctgggttccacctctggagaagggaagtgca
ggtagctcgcactgggagtaccagggatctcgccgggacatggagagagagcgagaccgc
gagagggaccgcacacccaccacaagcgagtacagcaacgaggatgaacgctatcactac
tacagccacgaccgggactacgagcgagagttccaccatggccgcgagcgcagccgagaa
cgcagccgtgagcgcagcagagagcgcgatgagcggcacagggaccggcgccatcgtgac
aaggaagagagcagcaaacacaagtcctccaagcgcaagcagcacgatggggaggagggg
gagggccatcggagacacaagcacaaaaagaataagcgcagtaaggaggacaaggaggca
ctggaggaggtgtcagggcacagagaggagtccgagggtaaggagtag
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