Scleropages formosus (Asian bonytongue): 108929090
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Entry
108929090 CDS
T04919
Symbol
hdac2
Name
(RefSeq) histone deacetylase 2 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
sfm03083
Polycomb repressive complex
sfm04110
Cell cycle
sfm04330
Notch signaling pathway
sfm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108929090 (hdac2)
03083 Polycomb repressive complex
108929090 (hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108929090 (hdac2)
04350 TGF-beta signaling pathway
108929090 (hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108929090 (hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108929090 (hdac2)
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108929090 (hdac2)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108929090 (hdac2)
HDAC complexes
Sin3A-HDAC complex
108929090 (hdac2)
BRAF-HDAC complex
108929090 (hdac2)
REST complex
108929090 (hdac2)
SHIP complex
108929090 (hdac2)
MiDAC complex
108929090 (hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108929090 (hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108929090 (hdac2)
Chromatin remodeling factors
NuRD complex
108929090 (hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108929090
NCBI-ProteinID:
XP_018598939
UniProt:
A0A8C9SCH2
LinkDB
All DBs
Position
1:42949727..42959847
Genome browser
AA seq
489 aa
AA seq
DB search
MAYTVHGGSKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGAVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPVLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
MDKIKQRLFENLRMLPHAPGIQMQAIPEDIIPEDTVDEDTEDADKRMSIRASDKRIACDE
EFSDSEDEGEGGRRNVANHKKGTKRARVEEDRKEAEEKKTEVKEEEKSKESSSEKTDTKS
IKTEQMSSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaccgtgcacgggggcagtaagaagaaggtctgctactattacgacggtgac
atagggaactactactatggacaaggacaccccatgaaaccccacagaatccggatgacc
cataacctgcttttaaattatggcctgtacaggaaaatggaaatatatagaccacacaaa
gccacagccgacgaaatgaccaagtatcacagtgacgattacatcaagttcctgcgatca
attcgacccgacaacatgtctgagttcagtaagcagatgcagagattcaatgttggagag
gactgtccggtgtttgacggattgtttgagttctgccagctctcagcaggcggttcagct
gctggtgcagtgaaactgaacaggcagcagacagacatagcggtcaactgggcagggggg
cttcatcatgccaagaaatcagaggcatcaggattctgctatgtcaatgacattgtcctt
gctatcctcgaactgcttaagtaccaccagagagtgctgtacattgacattgatatccat
catggagatggagttgaagaagccttctataccacagaccgtgtcatgactgtgtccttc
cacaaatacggagagtacttccctggaacaggagacctaagagatatcggagcgggcaaa
ggcaagtactacgctgtcaatttccccctgagagatgggattgatgacgagtcatatgag
cagatatttaagccggtgatggccaaggtgatggagatgtaccagcccagtgctgtagtc
ctgcagtgtggtgcggactcactgtctggggatcgccttggctgcttcaacctcaccatc
cggggccatgccaagtgtgtagagtatatgaagtccttcaacctgcccgttctgatgctt
ggcggagggggctacaccatccgcaatgtagctcgctgctggacctatgagacagctgtg
gctctggacacggacatccctgatgaactcccctacaatgattactttgagtactttgga
ccggatttcaagctgcacataagtccatccaatatgactaaccagaacacacaggaatac
atggacaagatcaagcagcgtctgtttgagaacctacgcatgctgccccatgccccaggg
attcagatgcaagccattcctgaggacatcatccctgaggacactgtggatgaggacaca
gaggatgcagacaagcgcatgtccatccgtgcatctgacaagagaatagcttgtgatgaa
gagttctcagattctgaggatgaaggggagggcggaagaaggaacgtggccaatcataaa
aagggtacaaagcgagccagggtcgaggaagataggaaggaggcagaagaaaagaaaacc
gaagtgaaagaggaggaaaaatcaaaggaaagcagttctgaaaagacagacacaaagagc
attaagacggagcagatgagcagtgcttga
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