Scleropages formosus (Asian bonytongue): 108929351
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Entry
108929351 CDS
T04919
Name
(RefSeq) syndecan-1-like
KO
K06257
syndecan 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04512
ECM-receptor interaction
sfm04514
Cell adhesion molecule (CAM) interaction
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108929351
04514 Cell adhesion molecule (CAM) interaction
108929351
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108929351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108929351
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfm04090
]
108929351
00535 Proteoglycans [BR:
sfm00535
]
108929351
Membrane trafficking [BR:
sfm04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
108929351
CD molecules [BR:
sfm04090
]
Proteins
108929351
Proteoglycans [BR:
sfm00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
108929351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
DUF8056
Motif
Other DBs
NCBI-GeneID:
108929351
NCBI-ProteinID:
XP_018599317
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All DBs
Position
1:complement(38365401..38372649)
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AA seq
196 aa
AA seq
DB search
MKVAGAVAGLFFMCLTCCLPVTPSYSFLLEDMEGSSDDQEFSGSGDWIYKDSVTETKIVD
QSTKWPSARLQPNDFDYSGDGRLRGERSENSMFDFDLEDQNEIIPHVRTKDLDSRIFDNA
DMSWPETLAFGKSRGVLNRSEVLAGVVAAGLVALAMAIMMVSFMVYKLKKKDGGSYDTGS
PNEKYQKPQKKKEFFV
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgcgggtgcagtggcggggctcttcttcatgtgcctgacttgctgtttacct
gtgactccttcgtattcattcctcctggaggacatggaagggtccagcgatgatcaggaa
ttttcaggctctggggactggatctataaggacagtgtaacagagacaaaaatcgtggac
cagtcgaccaagtggccatcagctaggttgcagcccaacgactttgattattccggggat
ggcaggcttagaggagagaggagtgaaaactccatgtttgattttgaccttgaagaccaa
aatgagatcatcccacacgttaggactaaagatctggacagcagaatatttgataatgct
gacatgagctggccagagacactagcctttggaaagagcaggggtgttctgaacaggtct
gaagtccttgcaggtgttgttgctgcaggcctggtggcattggctatggctatcatgatg
gtatctttcatggtctacaagctcaagaagaaggatgggggcagctatgacactggcagc
cccaatgagaaatatcagaagccccaaaaaaaaaaggaattctttgtttaa
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