Scleropages formosus (Asian bonytongue): 108929540
Help
Entry
108929540 CDS
T04919
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108929540 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108929540 (xrcc5)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
108929540 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
108929540
NCBI-ProteinID:
XP_018599668
UniProt:
A0A8C9RL29
LinkDB
All DBs
Position
12:29276739..29284941
Genome browser
AA seq
729 aa
AA seq
DB search
MARSVKAALVLCMDVGFSMSDSAPGLQSSFEEAKKVIRKFVQRQVFAENKDELGLVLFGS
DGTKNPLADGGQYQNICVHRHLMIPDFELLKEIQNDVQPGSKQADWLDALVVCMDLLQKE
TLGKKYERLNIAMLTDLQSPVSDDQLDTIIRNLKRAGITLQFFLPFPVDVEQSGMGGDEA
GGDGPGSKPLPHGGKGLTREQQQGLKLVRQIMTSMEEEEGLEEVYTFSSAIERLSIFKRI
ERRPMAWPCQLTIGSALSIRIVGYKAVTEERIKKTWTVVDAQSHKRDDVKRDTVYCLNDD
NETEVTKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKSFAVLGFTKQSLIQRHQFMGSQ
VVKVFAAKDDEHAAVALSALIRALHELEMVAIVRYAYDRRSNPQVGAAFPCIKEKYECLL
YVQLPFAEDLRFFSFPSLENNKKFTASAEQLSAVDSLIDSMMLMEEDGGEPQDIFKVNHI
PNPQFQRLFQCLQHRALNPNAPLPAMEPWLQAMLERPQVVTARCRTQLQEVRKRFPLTEV
VHKKEQKTSADVFGKGNAEEPEAKKSREDEEDEFSVAGIAQGVTAVGSVNPDKDFRALVR
QKSIPFGQVCQELTCRMEQLLGTKNPHYYSKCICSIRAFREESVKVGNAEFFNSYLQSLK
RSVPDRGLQYFWDSLVHDGVMLISKDEVEGSTVTKEESSQFMTTAEKVEAAAPVDEEDTG
DVDDLLDMM
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgatcggtaaaggcggcgctcgtcctctgcatggacgtgggtttctccatgagc
gactcagctcccggactgcagtcatcctttgaagaggccaagaaggtcatccggaagttt
gtccagcggcaggtgtttgcagagaacaaggatgagctgggcctcgtcctctttggcagc
gacggcacaaagaacccgttggccgacggcggacagtaccagaacatctgtgtgcatcga
cacttgatgatccccgactttgagctcctcaaggagatccagaatgacgtgcagcccggc
agcaagcaggccgactggctggatgctctcgtcgtttgcatggaccttttgcagaaggag
acacttggcaagaagtacgagcggcttaacatcgccatgctcactgacttgcagtctccg
gtcagcgatgaccagctggacaccatcatcaggaatttgaagagagctggaatcaccttg
cagttctttttgcccttccctgtggatgttgagcagagtggcatggggggtgatgaagct
gggggggatggaccaggttccaaacctctcccacatggaggaaaggggctgaccagagaa
cagcagcagggactgaagttggtgcggcaaatcatgacttcgatggaggaagaggaaggc
ttggaggaggtctacaccttcagttccgccatcgagaggctctccatcttcaagcggatt
gagcggcgacccatggcttggccatgccagctgaccattggcagcgccctgtcaatccgc
attgtgggctacaaagcggtgacagaagagagaatcaagaagacctggactgttgtggat
gctcagtctcacaagagggacgatgtgaagagggacacagtttactgcctgaacgatgac
aacgagaccgaggtgaccaaagatgacaccattcaggggttccgctatggcagcgacatc
gtgcccttttccaaggtggaccaggagcagatgaagtacaagtctgagggaaagagcttc
gctgtgctgggcttcacaaagcagagtctgattcagcggcatcagttcatgggctctcag
gtcgtcaaggtgtttgctgctaaagatgatgagcatgcggccgtcgctctgtcggccctc
atccgggcgctgcacgaactggagatggtggccattgtccgctacgcatatgaccggcgc
agcaacccgcaggtgggagctgccttcccctgcatcaaggagaagtacgagtgtctgctg
tacgtccagctgccctttgcggaggacctcaggttcttcagcttcccatccttggagaac
aacaagaagtttactgcctctgctgagcagctatccgcagttgactccctcatcgactcc
atgatgctgatggaggaggatggtggagagccacaggacatcttcaaggtcaatcatatc
cccaacccgcaattccaaaggctcttccagtgtttgcagcaccgggccctaaaccccaat
gctcctctgcctgcaatggagccctggcttcaggcgatgctagagcgccctcaggtagtc
acagcacgctgccgcacccagctgcaggaggtcaggaagaggtttccactcactgaggtt
gtacacaaaaaagagcagaagaccagtgcagatgtgtttgggaaggggaatgccgaggag
ccagaggcaaaaaaatcacgagaggatgaagaggacgagttcagcgttgcaggcattgct
caaggcgtcactgcggtgggcagcgtgaaccccgacaaggacttccgtgcactcgtccgc
cagaagagcatcccctttggccaggtctgccaggagctcacctgtcgcatggagcagcta
ctcggcaccaagaacccacactactactccaagtgcatctgcagtatccgtgccttcagg
gaggagtcggtgaaggttggaaacgctgaattcttcaacagctatctgcagtccttgaag
agaagtgttccagatcgaggccttcagtatttctgggattccctggtccacgatggagtt
atgctgatcagtaaagacgaagtggaaggaagcaccgtgaccaaagaggagtccagtcag
ttcatgaccaccgcggagaaggttgaggctgctgccccagtggatgaagaggacactgga
gacgtggacgacctgctcgacatgatgtga
DBGET
integrated database retrieval system
