Scleropages formosus (Asian bonytongue): 108929749
Help
Entry
108929749 CDS
T04919
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108929749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108929749
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108929749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Inhibitor_I53
DUF1168
ATG14
Motif
Other DBs
NCBI-GeneID:
108929749
NCBI-ProteinID:
XP_018600012
UniProt:
A0A8C9SCH9
LinkDB
All DBs
Position
13:15789380..15794211
Genome browser
AA seq
315 aa
AA seq
DB search
MPVSRMRMRPWLEDRLDSNSIAGLVWLDKEKKIFAIPWKHAARHGWEMEKDACLFKQWAI
HTGKYKVGMSNPDPKTWKANFRCAMNSLPDIVEVKDRSVNKGCGAVRVYKMLQNVSKNRE
KRSRTKDAKSKNKNKDAALKEEVLEESDASPLEDHNNYTKQNEETTPQADSTQHAFFQDF
LTQHGSTCDDSSDWSSPEHNQGHNFQVSPNHTTDFDAMSEELFQITQQFEWEQLQSTSMS
SFNVQSNVVDSTDSAHSPDSHWSDTSGQEIELRFYTELHTDETLQRRDGMTELEFPDMSG
LYESWSSSTVLQQIS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtcacgtatgcgcatgaggccgtggctggaggacagactggattccaactcg
attgctggattagtgtggctggacaaggaaaagaagatctttgcaattccttggaagcat
gctgcccggcacggttgggagatggaaaaagatgcttgtctttttaaacagtgggcaatt
catacagggaagtacaaggtgggaatgtctaatccagacccaaaaacatggaaagcaaat
ttccgctgtgcaatgaactcacttccagacatcgtagaagtaaaagacagaagtgtcaac
aagggatgcggggcagtacgtgtctacaagatgctgcaaaatgtttccaaaaacagagaa
aagaggtcaaggacaaaagatgctaaatccaagaataagaacaaggatgctgcattaaag
gaggaagtcctagaagagtctgatgccagtcctctagaagaccacaacaattacacgaaa
cagaatgaggaaaccacacctcaagccgacagcacccaacacgcctttttccaagacttt
ttaactcaacatggctctacgtgtgacgactcttctgactggtccagccctgagcacaat
cagggacacaattttcaggtgtcacctaaccacacaacagattttgatgccatgtctgaa
gagctctttcagattacacagcagtttgagtgggagcagttgcagagcacatccatgagc
agcttcaatgtacagagcaatgtggttgacagcacagactctgcacacagccctgacagc
cactggagtgatacatctggacaagaaattgagcttaggttttacaccgaacttcacaca
gatgagactttgcagcgaagggatggaatgacagaacttgagtttcctgacatgtctggc
ttgtatgaatcctggtcaagctccactgttctccagcaaatctcttga
DBGET
integrated database retrieval system
