Scleropages formosus (Asian bonytongue): 108929838
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Entry
108929838 CDS
T04919
Name
(RefSeq) syndecan-4-like isoform X1
KO
K16338
syndecan 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04512
ECM-receptor interaction
sfm04514
Cell adhesion molecules
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108929838
04514 Cell adhesion molecules
108929838
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108929838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfm00535
]
108929838
Proteoglycans [BR:
sfm00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
108929838
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Protocadherin
Motif
Other DBs
NCBI-GeneID:
108929838
NCBI-ProteinID:
XP_018600165
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Position
22:complement(16373559..16384258)
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AA seq
204 aa
AA seq
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MRKVCLLWLLLALASVYSESQVRETETWVPNQPHTDDSQEDLVSSGDFPNSSDFEFPDEE
DDDDEEEEEEMSGSGDHDFLNNGNYPVPSKPDVIDNRIPEMDKPNRPPSIDESEIVQRNE
VGLRSSTEQEDVPSNVLMAHASDESIFNKTEVIAALIAGGSVGVVFAIVLVLLLVYRMKK
KDEGSYDLGKKPIYKKAPTTEIYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagtgtgtctcctgtggcttttgctggcgctcgcctctgtgtattcggagtcg
caggtgcgggagaccgagacatgggtgcccaaccaaccacacacagatgacagccaggaa
gacctggtctcatcgggtgactttcctaacagctcggacttcgagttccccgatgaggag
gatgatgatgatgaagaagaagaagaagaaatgtctggatccggagatcacgatttccta
aacaatggaaactatcctgtgccctcaaagcctgatgtgattgacaacaggattcctgag
atggacaagccaaacaggccaccgtcaatcgatgagtctgagatagtgcaacggaatgag
gtcggcttgcggtcctccacggagcaggaggatgtgccatctaatgtgttgatggcccat
gccagtgatgagagtatcttcaacaagactgaggtcatagcagctttgattgctggagga
tccgtgggggtggtgtttgcaattgttcttgtccttctgctggtctaccgtatgaagaag
aaggacgagggcagctacgaccttgggaagaagcccatttataagaaagctcccactaca
gaaatttatgcctaa
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