Scleropages formosus (Asian bonytongue): 108929976
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Entry
108929976 CDS
T04919
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108929976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108929976
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108929976
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108929976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8
PHD_NSD
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-ANAPC11
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
108929976
NCBI-ProteinID:
XP_029114840
UniProt:
A0A8C9W852
LinkDB
All DBs
Position
16:complement(992501..1003594)
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AA seq
710 aa
AA seq
DB search
MLQASAVIVWEWLNEHGRWRPYSAAVSHHIEAAIRSDPRGGSIVLGQVDSRLSPYIIDLH
SMHQFRQDTGTLRPVRRSYYEATSAPGRGWVWEWENDAGSWTPYDSEVGVAIQAARDRQQ
PWLDLAPLGFCYLIDFQTMTQINRQTQRRRRIQRRLDLAYPLVAGTLPKAWAAGPLGSVG
IGGSGVGAYPGGTLSVPSLSALGQPCTCPQCMLVLSVKTGAMAHTLGRRPPHMKPPSPKG
APGGRAVTVATSGSYSHTLPHPLSASHSLSQHKVPTAFGHSLSLLGGASARAPPPLPPLP
PPPLPPSHQHQPPSTSVPPMSGSSSFSATASAPVAPTTALESSATMPNLSSSPAAPGPAP
RPPGSAAACAPPLPSRASLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPA
LAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPIPGLGHCCRKISKKQIRKGKSP
EEVVKKYLQKVRSPPEEDCTICMETLGGPSGYKGPGVAGVARAESVGRLSRCGHQYHLQC
LVAMYNNGNRDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCRTIRIIYTIP
PGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLLFSVGTSSTTGES
DTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELRAQGITEEDSIDQD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggcatccgccgtcatcgtgtgggagtggctcaacgagcacggccgctggaga
ccctacagcgctgccgtgtcgcaccatatcgaggcggcgattcgcagtgacccccgcggg
ggcagcattgtcctcggacaggtggacagccgcctctcgccatacatcattgacctgcac
tccatgcatcagttccgtcaggacacaggaaccctgcgtcccgtgcgtcgcagttattat
gaggcgacgtcagcgccgggccggggctgggtgtgggagtgggagaacgatgccggctcc
tggacaccctatgactcggaggtgggcgtggccatccaggcagcacgtgaccgccagcag
ccgtggctcgacttggcaccgctcggcttctgctacctcatcgacttccagaccatgaca
cagatcaacaggcagacacagcggcgccgccgcatccagaggcgcttggacctggcatac
ccgctggtggcagggacgctgcccaaggcctgggcggcgggaccccttgggtccgtggga
atcggcgggagcggcgtgggggcgtaccccggtgggacgctgtccgtaccttccctgagt
gccctgggccagccctgcacgtgcccgcaatgcatgctggtcctgagcgtgaagaccggt
gccatggcgcacacgctgggccgtaggcccccgcatatgaagcctccaagccccaaagga
gcccctgggggccgtgctgtgacagtggccacatctggctcctattcgcacacattaccg
cacccgttgtctgcttctcactccctatcgcaacacaaggtccccactgcctttggccac
tccctttcgctgctgggcggggcctcagcccgtgccccgcccccattgcccccattgcca
ccaccccctctgccgccatcccaccagcaccaaccgcccagcacctctgtcccgcccatg
tctggctcctcctccttctccgccaccgcctcagccccagtggcacccacgactgccctc
gagtcctcggcgaccatgcccaatttgtcctcgtcgccggctgctcctggccccgcccct
cgtcccccaggctcggccgctgcctgcgcgccccccctgccatcacgtgccagcttggca
gggctcagccgtcctgctctgcagcgcatcgccatggcacagtcccgcgccctcatcgcc
tccggagtccccactgtccctgtgaagaacctgaatggctcaagcccggtccatccagcc
ctggcaggtattacaggcattctgatgagcgccgcaggcctccccgtctgtctgacccgc
ccccccaagctggtgctgcacccgccgcccgtcagcaagagcgacatcaaacccattcca
ggtctgggacactgctgccgcaaaatcagtaagaagcagatccgcaaaggtaagagtccg
gaggaggtggtgaagaagtacctgcagaaggtccgcagcccacctgaggaggactgcacc
atctgcatggagacattggggggcccctcagggtacaagggccccggcgtggctggtgtg
gcgcgggcggagtcagttggccggctgagccggtgcggtcaccagtaccacttacagtgc
ctggtcgccatgtacaacaacggcaaccgcgatggcagcctgcaatgccccacctgcaag
accatctacggtgtgaagacgggcaaccagccacccggcaagatggagtaccacgtgatc
ccgcactcgctgcccgggcaccccgactgccgcactatccgcatcatctacaccatccca
cccggcatccagggccccgagcacccgaaccccggtaaacccttcactgcgagaggcttc
cccagacactgctacctcccagacagcgagaaggggcgcaaggtgctgcggctgctgctg
gtggcctgggaccgcaggctgctcttctccgtgggcacgtcgagcactacgggcgagtcg
gacacggtcatctggaatgaggtgcaccacaagaccgagtttggttccaacctgacaggc
cacggctacccggacccgggacacctggacaatgtgctggaggagctgcgtgcgcagggc
atcactgaggaggacagtattgaccaggactga
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