Scleropages formosus (Asian bonytongue): 108930128
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Entry
108930128 CDS
T04919
Symbol
synpo
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108930128 (synpo)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
108930128
NCBI-ProteinID:
XP_018600728
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Position
13:438303..466313
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AA seq
896 aa
AA seq
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MESGQGVAWTGSKPSTSETLRRPHEEESESSAFSGDSTRPCSSDLRGRKTNLSRSASLSE
KELKDARDRSHIIAAQLSIPSNVSSRGVHLFNRRKERVNAFTLVSFGKGIRHQEAMDEKD
PPLNRLAWEDSKTSDRELNHGSCDSRPSLCSSASMYKANKNMKVQTEHVLQLENVPNQEQ
DRHFVPLDKKDKEVSGQPASEFLEEITCDDCSSRLLHSNKGMGEISLSPQKTANGSLSLI
KQKTTILNRTARPFGSPDILHSPEARSPVMGLPPPPSQTVHTLPKFSKPLTAEFSSPPTS
LSYLPSPVSTPAHSPPPEFSSASLLCHITSPSPCLPQYPQTVAPESQYIPQFINERKQQE
PIKTGILDESKALRTNRKSMFTFQEKPRISPNPELLSLVQGVDEKKKLRSQPEHIQEEEL
LALGAEASNFLTKDIVIKEEAKVLQWSSCLKKAEPRIRPVPKPELGLTNASGKGAELFAR
RQSRMEKYVIETPSVVKGYVRSPSPTMSLPPSWVFPSNIPDRDKAMSGSSEINVQASKSA
KATSISSTKKSPAGDIPVWENGCNKTAMELPKYKPYQLNSSLFILNPTKDPMSSLPKGAP
PPKPIIVEKGCMKEMFLSKNHKNQSPTSPFAHLNSPDPLRSAKGPSSDVPQSPVSGLGSV
EVRPHNAALPGAQAGRIASPVSALSPTYPASPKYATQAPKPTYSARKAGIHSQIRTESLP
TVAMSWTPLQLKLFSSSEEPTSVVKASPSCGLQEPSLLSSMQENRCQSPPDVSQGDKANL
RLLAKNIISAAKRKNSPSPGGLTNVSISPVSLPSRHRAVSPFHPQSPTIMSPPSTPTHFT
HSPMCFHATCSLTDSDASLESEDSGLRSLGMRSYNTCPRGWGGSFRMKRGSFPGDL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggacaaggagtggcctggactgggtcaaagcccagcacctccgagactctg
cgtaggcctcatgaggaggagagcgagagctcagcgttcagcggtgactcaacacggcct
tgcagcagtgatcttcgaggcagaaagacgaacctcagcagaagtgccagcttatcagaa
aaagagctgaaagatgcacgagacaggagccacatcattgctgctcagttgtccatcccg
tcaaatgtcagctcaaggggtgtgcatctcttcaatcggcgcaaggaaagggtgaatgcc
ttcactctagtgagctttgggaaaggaattagacatcaggaagccatggatgagaaggat
cctcctcttaacagattggcttgggaagacagtaagacaagtgacagagaactgaaccac
ggaagttgtgattctcggccatccttgtgctctagtgcatccatgtacaaggcaaataag
aatatgaaggttcaaactgagcatgtccttcaattggaaaatgtgccaaatcaagagcaa
gacagacattttgttcccttggacaagaaggacaaggaagtctcaggacaacctgcaagt
gaattcctggaagaaataacttgtgatgactgtagcagcagacttctacactccaacaag
ggtatgggagagatcagtctcagtcctcaaaaaacagcaaacggctcactatccttgatc
aagcagaaaaccaccattttaaataggacagctcgaccatttggatcacctgatattttg
cattctccagaagccaggagtcctgtgatgggtcttccaccaccaccctcccaaacagta
cacactctgccaaagttttccaagcctctcacagcagaattttcctcccctcctacatcc
ctctcatatttaccttctccagtttcaaccccagctcactctcctccacctgaattctcc
tctgcttctctgttgtgtcatatcacttcaccctcaccatgcttgccccagtacccacaa
actgtagctccagagtcacagtacatccctcagttcatcaatgaaagaaaacagcaggag
cccatcaaaacaggtatacttgatgaaagcaaggcactccggacaaacagaaagtcaatg
ttcacatttcaggagaagcctagaatttctccaaaccctgagctcctgtctctggtgcaa
ggagtagatgaaaagaagaagttaaggtctcaacctgagcacattcaagaggaggagctg
cttgcgcttggggctgaagcctcaaattttctcaccaaagacatagtcatcaaagaggag
gctaaggttcttcagtggtcttcatgtttaaagaaagctgagcctaggatcagacctgta
cccaaaccagaacttgggctaactaatgcatcaggaaagggagcagagctttttgccaga
agacaatccagaatggaaaaatatgtgatcgaaactccatcagtggtgaaagggtatgtt
agatcaccttctcctactatgtccttaccaccctcgtgggtatttccatctaacatacca
gaccgagataaagcaatgtctggttcttctgaaatcaatgttcaagcctcaaagtctgcc
aaagccacatccatatcatcaacaaaaaagagtccagctggagatattccagtatgggag
aatggatgtaacaaaactgcaatggaacttcccaagtacaaaccttaccagcttaactca
tctctgttcatcctgaacccaaccaaagatccaatgagttctttaccaaaaggggcacca
cctcccaaacccattattgtagaaaaaggctgcatgaaagaaatgtttttatccaaaaat
cacaaaaatcaaagtcccacttcccccttcgcccacctaaattctccagatccattaaga
tcagctaagggtccctcctccgatgttccccaaagcccagtcagtggcctgggatctgtg
gaagtcaggccacacaacgctgctcttccaggagcacaagcgggccgtattgcctctcct
gtctctgctctgtctcctacgtatcctgcttctccaaaatatgccacccaggcaccgaaa
cccacgtactctgccaggaaggctggaattcattctcagatccgtaccgagtccctgccc
actgttgccatgtcctggaccccacttcagctgaagctgttcagcagctcagaggaacct
accagtgtggttaaagcatcaccttcatgtggcctgcaggaaccctctctgctgtcatcc
atgcaggagaacaggtgccagtcgccccctgatgtgagccagggtgacaaggccaacctg
cggctgctggccaagaacatcatcagtgccgctaagcgcaagaacagcccgtccccaggg
gggctgactaatgtctccatatcaccagtgtccctgccttccagacaccgggccgtcagt
cccttccacccgcagtcacccaccatcatgagtccccctagcacaccaacccactttaca
cactcacccatgtgttttcatgccacatgctcactcaccgactctgacgcttcgctggag
tctgaggactcgggcctcaggtcccttggaatgcgcagctataacacctgtcctcgcggg
tgggggggcagcttcaggatgaagagggggagcttcccaggtgacctgtag
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