Scleropages formosus (Asian bonytongue): 108930164
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Entry
108930164 CDS
T04919
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108930164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108930164
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108930164
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108930164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
PRY
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108930164
NCBI-ProteinID:
XP_018600797
UniProt:
A0A8C9TSC3
LinkDB
All DBs
Position
12:complement(20613111..20671401)
Genome browser
AA seq
686 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCTPNEPVESITAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAPDDGAMTSPGEAVQC
QFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLPDSHLRGLMCLEHE
DEKVNMYCVTDEQLICALCKLVGRHRDHQVAALGDRYEKLKRSPGRHLSEGGEKEPEDQQ
ALDSNLSNLIKRNNELETLMGKLIQTCQHVEVNASRQENKLMEECDLLIDIIQQRRQIIA
TKIKEGKVVRLRKLAQQIANCKQCIERSSSLITQADQTLKETDHARFLQTAKSISERVSM
ATASSQVLIPEINLTDTFDTFALDFTREKKMLESLDYLTAPNPPGIREELCTASYDTITV
HWTSDDEFSVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIF
IVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHRKLKISHDNLTVERDETSSKKSHTQDR
FVSQGSYGVLGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWVGKNACSWVLCRCN
SSWVVRHNGKELPIEPSPHLRRIGVLLDYDAGSLAFYDAVSSQHLYTFDVAFAQPVCPVF
NIWNKCLTVLTGLPIPDHLESAELQD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctcgagtcggagctgacctgcccaatctgtctggagctcttcgaggacccg
ctgctgctgccttgcgcccacagcctgtgtttcggctgcgcccaccgcatcctggtttcc
cactgcacccccaacgagcccgtcgagtccatcaccgctttccagtgtcccacctgccgc
tatgttatcaccctcaaccagaggggcctagagggactgaagcgcaacgtgactctgcag
aacatcatcgaccgcttccagaaggcctccgtgagcgggcccaactctcctagcgagacg
cggcgcgagcgcgcgcccgacgacggcgccatgacctcgcccggcgaggcggtgcagtgc
cagttctgcgagcaggacccaccgcaggatgccgtcaagacgtgcgtcacctgcgaggtg
tcctactgcgaggagtgcctgaaggccacgcaccccaacaagaaaccgttcacgggccac
cggctaatcgagccgctgcccgactcgcacctgcgcgggctcatgtgcctggagcacgag
gacgagaaggtgaacatgtactgcgtcaccgatgagcagctcatctgtgccttgtgcaag
ctcgtggggcgccaccgagaccatcaggtggccgccctcggcgaccgctacgagaagctc
aagagatctccaggccggcacctcagtgaagggggcgaaaaggagcccgaggaccagcaa
gctttggattcaaaccttagcaatctaattaagaggaataacgaactggaaactctcatg
ggcaagttaatacagacctgccagcatgtagaggtgaacgcatcgcgacaagaaaacaag
ctcatggaggagtgtgacctcttgattgatattatccagcaaagaagacaaatcattgcg
acgaaaatcaaggagggcaaggtggtgaggctgcgcaaactggcccagcagatcgccaac
tgcaaacagtgtatcgagcgctcttcgtcgctcatcacgcaggccgatcagacgctgaag
gagacggaccatgcccgcttcctgcagaccgccaagagcatctccgagagggtgtccatg
gcaacagcttcctctcaggtccttattcctgaaatcaacttgacagatacatttgacaca
tttgcgctagatttcacgagggaaaagaaaatgctggaaagtctggattatcttacagca
ccgaatcctccgggaatccgggaggagctgtgcacggcatcgtacgacaccatcaccgtc
cactggacgagcgacgatgagttcagcgtggtctcctatgagctgcaatacgccattttc
actggtcaggccaatgttgtcagtttgtgcaactcggccgacagctggatgattgtgccc
aacatcaagcagaaccactacacggtgcacggcctgcagagcggcaccaagtacatcttc
attgtgaaggccatcaaccaggcgggcagccgcagcagcgagcccggcacgctgaagacc
aacagtcagccgttcaagctcgacccaaagtctgcccaccggaagctgaagatctctcac
gacaacctgacggtggagcgggacgagacatcctccaaaaagagtcacacgcaggaccgc
ttcgtgagccagggcagctatggtgtcctggggaacgtttacatcgacagcgggcgccac
tactgggaggctctgattggtgggagcacatggtacgcggtaggcatcgcctacaagtca
gcgccaaagcacgagtgggtggggaagaacgcctgctcgtgggtgctgtgtcgctgcaac
agctcgtgggtggtgcgccacaacggcaaggagctgcccatcgagccgtcgccccacctg
cggcgcatcggcgtgctgttggactacgacgccggctcactggccttctatgacgccgtc
agctcgcagcacctctacacctttgacgtggccttcgcccagcccgtgtgccccgtcttc
aacatatggaacaagtgcttgacggtgctcacgggcctgcccatcccagaccacctggag
agcgccgagctgcaggactga
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