Scleropages formosus (Asian bonytongue): 108930200
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Entry
108930200 CDS
T04919
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04145
Phagosome
sfm04148
Efferocytosis
sfm04510
Focal adhesion
sfm04512
ECM-receptor interaction
sfm04810
Regulation of actin cytoskeleton
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108930200 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108930200 (itgb5)
04148 Efferocytosis
108930200 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108930200 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108930200 (itgb5)
04810 Regulation of actin cytoskeleton
108930200 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108930200 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108930200 (itgb5)
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
108930200 (itgb5)
Cell adhesion molecules [BR:
sfm04515
]
Integrins
Integrin beta subunits
108930200 (itgb5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
108930200
NCBI-ProteinID:
XP_018600841
UniProt:
A0A8C9VMX1
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Position
12:24414991..24448908
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AA seq
802 aa
AA seq
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MRSREGSARLRSLLFFLLLLLQSVTSLNVCTSGSASSCEECLLIHQSCAWCAQEESGRPR
TLVSRCDLTRNLLKQGCEPHFIENPRSSSTVLKNKPLSSKGSWPTQYDVIQIMPQKLSLS
LRPGDQTSFEVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMKKLTSNFRL
GFGSFVDKNIAPFSYTAPKYQTNPCNGYKLFPNCVPSFGFRHILSLTDKVDRFNEEVQKQ
MVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGRLAGLVEPHD
GQCHLDEKNEYSASTRMDYPSLALLGEKLAENNIYLIFAVTKRLYVIYKNFTALIPGTTV
EILDLDSKNIIQLIVNAYNNIRSKVELTVWDHPEDISLSFTATCQDGRPLPGLRKCADLK
IGDTVSFNVSVEGRGCPPPGTSRSFTIRPVGFKDRLEVSISYRCDCGCTGLTQANSSRCS
SAGTYSCGVCSCEPGYLGARCECPEDEASSQQAALCREAEGKQLCSGRGECSCNQCMCYE
SEFGKVYGAYCECDDFSCARHKGVLCSGHGECHCGECQCHTGYVGDNCYCSTETAACLAR
DGRMCSGRGSCVCGRCECTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQT
CQRLCKDEIITVETLKTDDPGAVLCLYKTESDCVMKFTYSEHASGQSILTALKEPECGAA
PDALTVLLAVVGSILLVGVALLAAWKLVITIHDWREFARFQSARSRARYEMASNPLYKQP
ISSHSMETMFNMHGKSYNGAVH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaggagccgcgaagggtcggcgcggctgcgctcgctgctcttctttctcctcctcctg
ttacagtccgtcacgagtctgaacgtttgcactagtggcagcgcgtcctcgtgtgaggaa
tgccttcttattcaccagagctgcgcctggtgcgcgcaagaggaatctgggaggccgaga
accctggtatcgcggtgcgacttgactcggaacctgctgaagcagggctgcgagccccat
ttcatcgagaacccgagaagcagctccacggtcctcaagaacaagcctctgagctccaaa
gggtcttggccgacccagtacgatgtcatccaaataatgcctcagaagttgtctctaagt
ctgcggccaggtgaccagacctcgtttgaggtgcaggtccggcaggtggaggactatccc
gtggacctttattacctgatggacctctccctgtccatgaaggatgacctggacacaatt
cgcaacctggggaccaagctggctgaggagatgaagaagctcactagcaatttccgcctg
ggctttggctcctttgtggacaagaacatcgctccgttctcgtacactgctcccaagtac
cagacgaacccctgcaatggatacaagctctttcctaactgcgtcccatccttcggcttc
cggcacatcctctctctgaccgacaaggtggacaggttcaatgaggaggttcagaagcag
atggtgtcccgcaaccgcgatgccccagagggtggcttcgacgccatcctgcaggctgct
gtgtgcaaggagagaatcggctggaggaaggaggcgttccacctgctggtgtttgccacg
gacgacgtccctcacctggcccttgatggcaggctggctgggctagtggagccccacgat
gggcaatgtcacttggatgaaaagaatgagtacagcgcctccaccaggatggattacccc
tctttggctctcctcggggagaagctggctgaaaacaatatatacctcatctttgcagtc
accaagaggctctacgtcatttacaagaatttcactgcactgattccaggaacaacagtt
gagattctggacctggactccaagaacatcatccaactgatcgtcaacgcctacaacaat
atccggtccaaggtggagctgactgtgtgggaccatcctgaggacatcagcctgtctttc
acagccacctgccaggacggccgtccactgcctgggctccgcaagtgtgcagacctaaag
atcggagacacggtgtcctttaacgtgagcgtggaaggacgtggctgcccaccacccggg
accagccgcagcttcaccatccgacccgtaggcttcaaagaccgactggaagtctccatc
tcttaccggtgtgactgcggctgcacggggctgacgcaggccaacagcagccgctgcagt
tctgccggcacttactcctgcggtgtctgcagctgcgagccaggctacctgggcgcgcgt
tgcgagtgcccggaggacgaagctagcagccagcaggcagctctgtgccgggaggccgag
ggcaagcagttgtgcagcgggcgtggcgagtgcagctgcaaccagtgtatgtgctatgag
tccgagttcggcaaggtgtacggtgcctactgcgagtgcgatgacttctcctgtgcccgc
cacaagggcgtcctttgctcaggtcacggggagtgtcactgcggcgagtgccagtgccac
actggctacgtgggtgacaactgctactgttccacggaaactgcagcctgcctggcgcga
gatgggaggatgtgcagtggacggggcagctgtgtctgtggccgctgcgagtgcacagaa
cctggtgcttttggggacacctgcgagaagtgccccacctgccctgatgcctgcggcacc
aagcgggagtgcattgagtgtcggctgttcaattctgggcgcctcgcggacaaccagacc
tgtcagcggctatgcaaagacgagatcatcaccgtggagacgctcaagacagacgaccct
ggcgctgtactgtgcctgtacaagacagagagcgactgtgtgatgaagttcacgtactcc
gagcatgccagtggccagtcaattctcaccgctctaaaggaaccagagtgtggtgcagcg
cctgatgccttaaccgtcctcctggctgtggtgggcagcatcttactggtgggtgtggcc
ctgctggctgcctggaaactggtcatcaccatccacgactggcgggagtttgcccgcttc
cagagtgcccgttcacgggcccgctacgagatggcctccaacccgctgtacaagcagccc
atctcaagccactccatggagaccatgttcaacatgcacggaaagtcttataacggggcg
gtccactga
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