Scleropages formosus (Asian bonytongue): 108930579
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Entry
108930579 CDS
T04919
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm02010
ABC transporters
sfm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108930579
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108930579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfm02000
]
108930579
Transporters [BR:
sfm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108930579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
108930579
NCBI-ProteinID:
XP_018601397
LinkDB
All DBs
Position
9:complement(6097414..6126836)
Genome browser
AA seq
2306 aa
AA seq
DB search
MGVWTALKLLLWKNITYRRRSKIQLVIELLWPLFLFVILISVRHSHPPYKQTQCHFPNKA
LPSAGTLNWVQGIICNINNPCFHHTTPGETPGRVGNFDYSILSRLFIDSRTILSYSANQS
VFSGFQEILSAVQKLGERPDAWPNMPVREYLRANETFSSFLLVNGSLPPTALDQLMKAQL
NFQVLSLAGAGLPLKEIVCNASLLGQYLTVGQQESLSELQLALCAVPSDILQAAEQIFLS
QLDYSKLFTRDRLLSSAAELQVLSNAIASVSAEAAQLMDNLSSLSSFVELSTELQSLSPD
NRSSSPRESFRALSRIMCGYPEGGGEQIPSLNWYEDNDIKSFLGRSSEEDTDKQDDNTTT
PYCKSLIQSLESNPLSRIVWQGIKPLFTGKLLYTPDTPVTRSIMGEVNKTFQDFRVLEDI
QEAWEEVGPQIKAFMESSTEIQLLQDLLRRPEVAMLVNLQLENTSWTASRIARFLSTPQP
NAPKRPGAPITWQDVYQSINTTVSTISQFTQCFSVNKLEGTASEGKMIERALELLESRQF
WAGVVFLLPDPSSPTLPSHVSYKIRMDIDDVARTNKIKDRFWDPGPAADPFNDLRYIWGG
FVYVQDLVERSVSHVLSGKKQDIGIYLQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMRIMGLGTGTLWTSWFISSFVPFLISAALLISLLKWGDILPY
SNPAVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFSFYLPYVLCVAWRDRLT
FELRILASLLSPVAFGFGCEYFSLYEEQGVGIQWFNWASSPMEGDSYNFGTVIVILFVDA
IIYGIATWYIEAVFPGEYGIPRPWYFIFQLNYWGGVPLEVGMPIPPASRDDSEICQEEEP
SNLPLGVAVRNLVKIYKQGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTVYIKGMDIRTDMDDIRKILGVCPQHNVLFDILTVEEHVWFYGCLKGLSGPEIRDEM
DKLLEDVGLLHKRHEQIKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYRKDRTIILSTHYMDEADLLGDRIAIISQGQLCCCGSPLFLKAHLGTGYYLTAVKD
DDNRAPDCSVTTGKPMSSAIKKDSDSSKSDDTGLGDESGLGTAALLALAQRHISQVRLVE
DVGREVVINFPHAAAEDGTLASFLAELDRRLAELGIASYGLSDTTLEEIFLKVAEETGVD
ADPEEMCSKPSGPHGQRNDRFDEPETGRKPLRKQEPLETDPLSGDGRGGVPRIGWGLTVQ
QLRALFIKRWLYARRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWMYGEQ
YTFFSNDAPGDPEIHNLLDALLDNPGFGTECMERNGESRCTEEEGAVFRRPQIPYSTWKL
FSTGNWSAAKPSPECQCSTDKVRRMLADCPEGAGGIPPPQIKRPTGDILQNMTGRNISDY
LVKTYPQILRKSLKTKKWVNEFRYGGFSLGGSSSQAAPQVDRVEESILAIRSRYRIHQNS
SLNRLLDRLPEFLGGLSSRRNVKVWFNNKGWHAMASFVNVMNNGLLRASLPPGIERRRHG
ITAYNHPLNLTKEQLTEVAMMTTSVDVLVSICVMFAMSFVPASFVLFLIEERVSKAKHLQ
FVSGVKPVLYWLANFTWDMLNYAVPATMVVLIFIGFQQQSYVSDTNLPALVLLLMLYGWS
ITPLMYPASFIFNVPSTAYVVLTSVNLFIGINGSIATFVLELFTDQYLSDVNKILKKVFL
IFPHFCLGRGLIDMAKNQAMVDAFQRLGTKQTLDPLSWDFVGKNLFAMAVEGVIFFLFTL
LLQYKFFINCRPFSDLGLPPLGPEDQDVAKERRRVTSGKAQEDILLMKELSKVYKVGRKP
AVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAVTYGEAFLNGHSVLNEMERVHQL
MGYCPQFDAVSDLLTGREHLEFYARLRGVREEAVAKVAQWGVKKLGLTQYAERKAGGYSG
GNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRSVILTSHSMEEC
EALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRMLEPTEEPCPVDVFIRTSFPAIE
LKERHQNVLQYQLPSHACSLAHVFSVLSNSCRELGIADYSVSQTTLDQVFVNFAKDQSDD
DQLREVSVIRTIETAPSSRPALPGRALEVMSKEVNGAVGSGMSMAKRPPSQRESTANGAE
SREEASSSKDPTALFLVNSSSQESKM
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttggacagcactgaagctcctgctgtggaagaacatcacttatcgccggaga
agcaagatccagctggttatagagctcctctggcctctcttcttgtttgtcattctcatt
tcggtgcgccactctcaccctccgtacaagcagacccagtgtcattttcccaacaaggcc
ctcccatcagcaggcaccctgaactgggtgcaaggaatcatatgcaatattaacaaccca
tgcttccaccacactaccccaggagagactcctgggagggtggggaactttgactactcc
atactttctcgactgtttattgactccaggaccatcctgtcctacagtgccaatcagtca
gttttttcgggattccaggaaattctgtctgctgttcagaagcttggagaaaggccagat
gcctggccaaacatgcctgttagagagtacctgcgtgccaatgagaccttctccagcttc
ctccttgtcaatggaagcctacctcctactgccctggatcagctgatgaaagcacaactc
aactttcaggtgctgtccttagctggagctgggctgcctctgaaggagattgtgtgcaac
gcctctctgctgggtcagtacctgaccgtaggccagcaggaatccctgtcagagctgcag
ctggccctctgtgcagtgccctctgacatactgcaggcagcagagcaaatcttcctctcc
cagctggactacagcaagctctttacgagggacaggttgttgtccagtgctgcagagcta
caggtcctcagtaatgcgatcgcctccgtttcagcggaagcagcacaactcatggataat
ctctcctccttgtccagctttgtggagctaagcacagagcttcagtcactttcccctgac
aaccggtcaagttcaccccgcgaaagcttcagggccctgtctcgcatcatgtgcgggtac
ccagagggaggtggtgagcagatcccttcactcaactggtacgaggacaatgacatcaag
tccttcttgggcaggagcagcgaggaagacacagacaaacaggatgacaacaccactact
ccatactgtaaaagtctcattcagagcctggagtctaacccattgtcccgcattgtgtgg
caagggattaaaccactgttcactggaaagctgctttataccccagatactcctgtcact
cgcagcatcatgggagaggtgaacaagacctttcaggacttcagggttctggaggacatt
caggaggcttgggaagaggtgggaccccaaatcaaggccttcatggaaagcagtacagag
attcagctcctgcaggatctcttgagacggcctgaggttgctatgctggtaaatctacag
ttggagaacacgtcctggacagcatcgagaattgcccgattcttgtccacaccccagccg
aatgctccaaagagaccgggggcacccatcacatggcaggatgtgtaccagagcataaac
accaccgtttctaccatttcgcagtttacccagtgcttctcggtgaacaagctggaaggt
actgcttctgagggcaagatgatagaaagggcattggagttgctggagagccggcagttc
tgggctggtgttgtattcctcctgccagacccctcatcacccactttgccttcacatgtt
tcctacaaaatccgcatggacattgatgatgttgctcgcaccaataagatcaaggacaga
ttctgggatcccggtccagcagcagatcccttcaatgacttgcgctacatatgggggggc
tttgtgtacgtgcaggacctggtggagcggagtgtgtcacatgttcttagcggcaagaag
caagatattggcatctacctgcagcagatgccctacccatgctatgtggatgatgtcttc
cttcgtgtcctgaaccgctccctgcctctcttcatgacactcgcgtggatctactccgtg
gccatgatcatcaagggtgtggtgtacgagaaggaggcgcgactaaaggagaccatgcgt
atcatgggccttggcacaggcactctgtggaccagctggttcatcagcagctttgtccct
tttcttatcagcgcagctctcctcatttctctactgaagtggggagacattctgccctac
agcaacccagctgtggtttttttcttcctcgctgcctttgccacagccaccattatgctg
tgcttcctgatcagcaccttcttctcccgtgccaacctggcagcagcctgtggtggtctc
atctatttctctttctacttgccctatgtgctctgtgttgcctggagggatcgtctcacc
tttgaactcagaatcttagctagcctgctttctccagtggcctttggctttggctgtgag
tatttctccctgtatgaggagcaaggcgtgggcatccagtggttcaactgggcttctagt
cccatggagggagattcatataactttggtaccgtaattgtgatcttgtttgttgatgca
ataatctatgggatcgccacatggtatattgaagcagtttttccaggggagtatgggatt
cctaggccgtggtacttcatctttcagctgaattactggggaggagtacccctagaagta
ggaatgcccatccctcctgcctcaagggacgattcagaaatttgtcaggaggaggaacca
tctaatctgcctcttggagtggctgttcgcaaccttgtcaaaatttataagcagggtgct
aagctggctgtcaaccacctcaatctcaaattctacgaaggtcagatcacttcatttctg
ggccacaatggtgctggcaagaccaccactatgtccatcctaacaggcctgtttcctccc
actgctggtactgtatacatcaagggtatggacatccgcactgacatggatgatatccgc
aagatccttggcgtgtgtcctcaacataatgtcctctttgacatactgactgtggaagag
catgtgtggttctacgggtgtctgaaaggattatcaggtcctgaaataagagacgagatg
gacaagctgctggaggatgtaggactgctacacaaacgccatgaacagatcaagaacctc
tctggtggcatgcaaaggaagttgtctgtggctattgcctttgtgggagggtccaaggtg
gtggttctggatgagcccactgcaggtgtggacccctattcccgcaggggcatctgggac
ctgttgctgaagtaccgaaaagaccgcaccattatcctgtccactcattacatggatgaa
gccgacctcctgggtgacaggatcgccatcatctctcagggacagctgtgctgctgtggc
tccccactcttcctgaaggctcatctggggactggctactacctcacagctgtgaaggat
gatgacaatcgtgcaccagattgcagcgtaaccactggaaagcccatgtcctctgccatc
aagaaggatagcgactcctccaagagcgatgacacaggtctgggtgacgagagtggctta
ggcacggcagctctgctggcactggcacagcgccatatatctcaggtccggctggtggaa
gatgtgggcagagaggtggtgatcaattttccccatgcggctgcggaggacggcaccctg
gcttcctttctagcagagctggaccggaggttggctgagctcggcattgccagttatggc
ctttccgacaccactctggaggagatctttctgaaagttgctgaagaaacgggggtggat
gctgaccctgaggagatgtgctcaaagccatctggtccccacggccagcggaacgaccgc
ttcgatgaaccggagacaggaaggaagccattgcgcaaacaagaacctctggaaacggac
cctttgagtggtgatgggaggggtggtgtgccccgtatcggatggggtctgaccgtacag
cagctacgggcccttttcattaagaggtggctatacgctagacgcagtcgaaggggcatc
tttgcacagattgtcttgcctgctgtgtttgtgctgattgccctgctgttcagccttatt
gtcccaccttttggaaagtacccgtctctggagctgcagccctggatgtatggagagcag
tacacatttttcagcaatgatgcccctggggacccagaaatccataatctgctggatgcc
ctactagataaccctggttttgggaccgagtgtatggaaaggaatggggagagccggtgt
acagaagaagaaggtgctgtgttcagaaggcctcagattccctactctacatggaagctc
ttcagcactgggaactggagtgcagccaagccctcccctgagtgtcagtgcagcactgac
aaggtccgcagaatgctggcagactgcccagagggggcaggtggcatccccccaccacag
atcaagaggcccactggagacatcctgcagaacatgactgggcgaaacatctctgactat
ctggttaagacatatccgcagatcctgcgaaaaagtttgaagaccaagaaatgggtcaac
gagttcagatatggtggattttctctgggtggcagcagttcccaggcagcaccccaagtt
gatcgcgtggaggagtctattcttgccataagaagtcgctacagaatacatcagaacagt
tcactgaacaggctcctggacagactaccagaatttcttggtgggctgagcagtcgaaga
aatgtgaaggtgtggttcaacaacaaaggttggcatgccatggcatcctttgtcaatgtc
atgaacaatgggctcctccgtgccagcctaccacctggaattgagcggaggagacatgga
attacagcctacaaccaccccctcaatctcaccaaagaacagctcactgaggtggcaatg
atgaccacatcagtggatgtgctggtttcaatctgtgtgatgttcgccatgtccttcgtg
ccagccagctttgtgcttttcctcattgaggagcgcgtcagcaaggccaagcacttgcag
tttgtcagtggagtgaaacccgtcctctactggctcgccaatttcacatgggacatgctg
aactatgctgtaccagctacgatggtagtcctaatcttcattggcttccagcaacagtca
tatgtttctgacactaatctacctgctttggttttgctactcatgctctatgggtggtca
attacgcctcttatgtacccagcatccttcatatttaatgtcccaagtacagcctatgtg
gtcctcacatctgtcaaccttttcattggcatcaatggcagcatagccacatttgtcctg
gaacttttcacagatcagtatctcagtgatgtgaataagatcctgaagaaggtctttctg
atcttcccacacttctgtctgggccgtgggctcattgatatggcgaaaaaccaggccatg
gttgatgctttccagcgtctgggcaccaaacagactctcgatcccttgtcctgggatttt
gtgggaaagaatttgtttgccatggcagtggaaggtgtcatcttcttcctgtttacttta
ctgctgcagtacaagtttttcataaactgcaggcccttttctgacctgggtttgccccct
ctgggcccagaggaccaggatgtagctaaggaaagacgcagagtcactagtggaaaagca
caagaagatatactgcttatgaaagaattaagtaaggtgtacaaagtgggaagaaagcct
gcagtggatcgtctttgtctggggattccacgaggggagtgttttggccttctgggggtg
aacggtgctgggaaaacgtccacatttcgtatgctcactggagacaccgctgtcacctat
ggagaggcctttctcaatggacacagcgtgctgaatgagatggagcgggttcaccaactc
atgggctactgcccacagttcgatgccgtcagtgacctgctcactggaagggagcacctg
gagttctatgcccgtcttcgtggggtccgggaagaagctgtagcgaaggttgcccagtgg
ggagtgaaaaagcttggcctcacccagtacgctgagcgtaaagcaggtggctacagtggg
ggcaacaaacgtaaactgtctactgccatctccctgattggggcacctcctgtcatattc
ctggatgagcctaccacaggcatggaccccaaggccaagcggttcctctggaattgcatt
ctcagtgtcatcaaagagggtcgatctgttattctcacctcccacagcatggaggaatgt
gaagctctgtgcaccagaatggccatcatggtcaatggaaggttccgttgcctgggttct
gtgcaacacctcaagaacaggtttggcgatggctacacaatcattctgcgcatgttagag
ccaaccgaggagccctgtcctgtggacgtgtttataaggacctcgttccctgctattgag
ttgaaggagcgacaccagaatgttctgcagtaccagctgccctcccatgcctgctccctg
gctcacgttttctccgtgctctccaacagctgcagagaactaggcatcgcagattactct
gtatctcagaccacactagaccaggtgtttgtgaactttgcaaaggaccaaagtgatgat
gaccagctgagggaggtgagtgtaatcaggacaatagagactgctccatccagccgaccg
gcactacccggcagggcccttgaagtcatgtcgaaggaggtgaatggggcagtaggtagc
gggatgtccatggcaaagagaccaccatctcagagggagtcaacagccaatggagcggaa
tcccgagaagaggcatccagcagcaaggaccctacagcactgttcttggtgaacagcagc
tcacaggagagcaagatgtga
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integrated database retrieval system
