Scleropages formosus (Asian bonytongue): 108930712
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Entry
108930712 CDS
T04919
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108930712 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108930712 (mlh3)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108930712 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
108930712
NCBI-ProteinID:
XP_018601603
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All DBs
Position
15:26794125..26806588
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AA seq
1348 aa
AA seq
DB search
MIKCLPGEVQAKLRSGVAMVSLQQCVEELLLNAIDAQASCVAVRLDLDGCKVQVLDNGLG
MDRDDMERVGNRYFTSKCSTLEDLENLRFYGFRGEAIASIASLSTLMEISSRPKLSVKTF
VKVFREGEALNVFEAETGRPSSGTTVVICNFFHGMPVRRKRMDPVLECERIRQRVEAISL
MHPSVSFTLKKDCSGAMVVQIPKARDTYHRFTQIHGIGRAQKLGEVNFCHGQFQMSGYIG
REGHYNNSFQFLFVNKRLVLKTPIHKLLNLLLKKVCSVSQLNGSSGVSHVLGSPKQRLGP
ELHGVYVINIECHYSEYDVCYEPAKTLIEFKDWDSVLFCVEEGVKKFLTTENLITEISPE
DIQDGFGGPVNPCSAMPCITRECYEGKLLASKAVYRRFTDNPNKTEEVSSINERADYSRA
IETDKSNVEAARTMEQKCQPASTSVPYVPGAVSSQTENWPELCNMDTSTDTSMLEPLKDN
ARCKEASHNVQFTDGDSPVSESENMHHNTNPEGVKDWENERFAIQKTETVDHTGCIELQL
GSEGFIKHIIPQLHTTVLPKEQMPGWLRFHSSRPVPSQQLFPLSSTFNGRNFTAVKKCSG
QTGALMSHTVKQLPSVADFEAKEKPFGATKRKLPFIAESSLSEVYGGGNSDLPAVKSKVF
KVMPRARLSLPVQAGSLDRFRRIYGNQRETPVLSVETSNSQMALDVSAPQVGHTMAYTEQ
CLSSAEEDLLSAASPAWVQDTPVLLSNHTTLKHSSIQSWSSESSLAGKLSRLKNQQTEDK
SRAFKQPLSGVPNRGCCDKDKLNQVNREEQATNELFPISSDVLDSNANYMETDFERRGDA
NSFSEIADAKSGNFCGPFCTTRDLSSPLFPVIEKDVSPAQSASEIKQDLPSGAEFCTVLN
TFGAVGEPSGGEEAESRDWQEHFDTSVGKLSYVNRVTGMSKYEAPHVEDTQVYCVKDVTT
MAVSVMSRNGFEYRCYPFQTELVLPFLPRSRAERVLSTGSDNTGEVLALVLVSPHRNGST
SLNSTVMLFLCLLSEAHQGASSLYSLYSDWENPVFVRPPEVALNVTSAQAEGLAVKIHSV
LYPYRFTKDMISSMKVIDQVDKKFLVCLINTRDQGNTAGGDTEGNLLVLVDQHAAHERVR
LESLVADSYEEDPEVPGQKQLCSSIVTPPLQVDITEEEQRLLRSCQPFLKGLGLEVTFVE
VGEPRALVSKVPVCFVEKEANELRRGRPSVAKAVVEEYIREQFELLRSTGRVRGTLPLTV
LKVLASQACHGAIKFNNHLSREECCRLVCALSACQLPFQCAHGRPSMVPLADLLHIDTQE
PSKPNLGKLRKMYRTWKLFGNHKERHPL
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtgtttaccaggagaggtgcaggcaaagctgcgctcaggtgtggctatggtg
tccctgcagcagtgtgtggaggagctactcctcaacgccatcgatgcccaggcctcctgt
gtggccgtccgccttgacttggatggctgcaaagtgcaggtcttagacaatggtttagga
atggaccgggatgacatggagcgagttggaaacaggtatttcacaagcaagtgcagcacc
ctggaggacttggagaacctgcgcttctatggcttccgtggagaagcaattgccagcatt
gcctcactatccacgctgatggagatttcctcccggcccaaactctccgttaaaaccttt
gtcaaagtctttcgggagggtgaggctttgaatgtgtttgaggctgagaccggcagacca
tcctcagggaccacagtggtaatctgcaatttcttccatggtatgcctgtgagaaggaag
aggatggaccctgttttggaatgcgaacgcatcaggcagagggtagaggccatctccctt
atgcacccctcggtctccttcactctgaaaaaagactgcagtggagccatggttgtgcag
atccctaaggccagggacacgtaccataggttcacacagattcatggcattgggagagca
cagaagcttggagaggtcaacttctgccatggccagtttcaaatgagtggttacattggt
agggagggtcactacaacaacagcttccagtttctgtttgtgaataagcggcttgttctg
aaaacccccatccataaactgctgaacttgcttttgaagaaggtctgcagtgtgagccag
ctgaatggcagctctggagtgtcgcatgtcctgggcagcccaaagcagcggctgggacct
gagctacatggagtatatgtcattaatattgagtgccattattcagagtatgatgtatgc
tatgagccagcaaagaccctcattgagtttaaagactgggacagtgtgctcttctgtgtg
gaggagggggtcaagaagttcctgaccacagagaacttgatcactgagatttccccggaa
gacattcaagatggttttggtggaccggtcaacccatgtagcgccatgccttgtattacc
agagaatgctatgaggggaagttgttggcatccaaagctgtctacaggaggtttactgat
aatccaaataagacagaagaggtgagctcaataaatgagcgtgccgattattcacgtgca
attgaaactgataagagtaacgttgaggccgcaagaactatggaacagaaatgtcagcct
gcctcaactagtgtaccatatgtcccaggtgcagtcagttcacaaactgaaaactggcca
gaactatgcaatatggacaccagtactgacacttcaatgcttgagcctctgaaggataat
gctcggtgtaaggaggcaagccataatgtccagttcacagacggtgatagccctgtttca
gaaagtgaaaatatgcatcacaatacaaatcccgaaggagtgaaagactgggaaaatgag
agatttgccatacaaaaaactgaaacagtagatcacacaggttgtatagagctacagctg
ggctcagagggtttcattaaacacataatacctcagctacatactacagtgttgcccaaa
gaacagatgccaggttggctcaggtttcattcatctaggccagttccttctcaacaactt
tttcctttgagctcgacattcaatggcagaaattttacagcagtgaagaaatgttctgga
cagactggtgctctgatgtcacatactgttaaacagctgcccagtgttgcagattttgag
gccaaagaaaagccttttggtgctacaaagaggaagctgccgtttatagcagagtccagt
ctttcagaggtttatgggggtggaaacagtgatttacctgcagtgaagtctaaggtcttc
aaagtgatgccacgtgccagattatctttgccagtccaggctggctccctggacaggttt
agaagaatatatgggaatcagagagaaacaccggtactctctgtggaaaccagtaacagt
caaatggctctcgatgtcagtgcaccacaggtggggcataccatggcatatacagaacag
tgtttgtcttctgctgaagaggatcttctaagtgccgcaagtccagcatgggtgcaggat
actcctgtcctgctttcaaaccataccacacttaagcattcctctatccagagctggagt
agtgaaagctccctagcaggcaaactgtcacgcttgaagaaccaacagacagaggacaaa
agcagggctttcaaacagcctcttagtggtgttccaaacagaggttgctgtgacaaagac
aagcttaatcaagttaatagagaagaacaggcaactaatgagctctttcctatatccagt
gatgtcctagattccaatgctaattacatggagacagattttgaaagacgaggtgatgca
aacagtttctcagaaattgccgatgccaaatcagggaacttttgtggaccattttgcact
acaagagatttatcctctccactctttccagttatagaaaaagatgtgtccccagctcag
tcagccagtgagattaagcaggaccttccctcaggtgcagagttctgcactgttctgaac
acttttggggcagttggagaacccagtggtggtgaggaagcagaatcacgtgactggcag
gaacactttgacacctcagtggggaagctgagctacgtcaacagagtgacaggaatgagc
aaatatgaggcccctcatgttgaagacacccaggtctattgtgtaaaagatgtcaccacc
atggcagttagtgtcatgtctagaaatggctttgagtatcgatgttacccatttcagaca
gagctagtgttgcccttcttgccgaggtccagagcagagagagttcttagtacaggctca
gacaatacaggtgaggtccttgctctagttctagtgagtccccacagaaatggtagtact
tctttgaacagcacagttatgctgtttctttgtttgctttcagaagcccaccagggtgcc
agctctctctactctttgtactcggactgggaaaatccagtgtttgttcgccctccagag
gttgctctaaacgtaaccagtgctcaagcagaagggcttgctgtgaaaatccacagtgtt
ctttatccttaccgtttcaccaaggacatgatcagctccatgaaggtcattgatcaagtg
gataagaagtttcttgtttgtttgattaacaccagagaccaagggaatactgcaggcggt
gacactgaaggaaacctgctggtgctggtggatcagcatgcagctcatgaacgtgtccgt
ctggaaagcttggtggcagactcatatgaggaagaccctgaggttccaggccagaagcag
ttgtgctcctccatcgtgaccccaccactccaggttgacatcacagaagaggaacagagg
ctgctcaggtcctgccagccattcctcaagggtttggggctggaggtgacctttgtggag
gtgggggagcctcgagcactggtgtcaaaggtaccagtgtgttttgtggagaaggaagcc
aatgagctgcgtcgtggaagaccatccgttgctaaggccgtagtggaggagtacattcgg
gaacagtttgagctactgcgatccacaggccgggttcgaggaacactgccattgacagtc
ctcaaggttctggcctcacaagcctgccatggagcgattaagttcaacaaccacttgagc
agagaagagtgttgcagactggtgtgcgctctctctgcctgccagctgcccttccaatgt
gcccatggccgaccctccatggttcccctggcagacctcctccacatcgacacccaggaa
ccttcaaaaccaaacctcgggaaactccggaagatgtatcgaacatggaaactcttcgga
aaccataaagaaaggcatccactatga
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