Scleropages formosus (Asian bonytongue): 108930825
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Entry
108930825 CDS
T04919
Name
(RefSeq) CLIP-associating protein 1-A-like isoform X13
KO
K16578
CLIP-associating protein 1/2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108930825
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfm04812
]
108930825
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108930825
Cytoskeleton proteins [BR:
sfm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108930825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT
CEP104-like_TOG
TOR1L1_N
Cnd1
ParcG
HEAT_DAAF5
MMS19_N
MMS19_C
TAN
Paxt-1_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
108930825
NCBI-ProteinID:
XP_018601781
LinkDB
All DBs
Position
5:complement(6813278..6888915)
Genome browser
AA seq
1295 aa
AA seq
DB search
MTTGEDKNFDDEDSADGSRSCSSASSCKGGPRAFSTGSVRRRFSGSGPKAPGKEGTSAGA
VDEEDFIQAFEDVPSVQIYSNKELEDSMAKIREVLSDDKHDWELRVASLKKVRSLLLAGA
AEHDGFFQQLRLLEGAFKLSAKDLRSQVVREACITLGHLSSVLGNRFDHGAESIMPTLLN
LVPNSAKVMATSGIAAIRLIIRHTHYPRLIPILTSTCTSKSVAGRRRCYEFLDLLLQEWQ
THPLERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHFRREAEHLFQALELSYQKAL
QLHLKNSDSVVSLPQSDRSSSSSQESLNRPLSAKSPVGSSISRAKVTTCKAPSTPGTLQR
SCSDIDVNAATNAKARMTVVPSTAAPFTSASALPPGSYASLDGTPSKPEGRVRTRRPTSG
SMAVANTVTDSRGRSRAKASSQSQRSRSANPTGASSRSGSPGRVLGHMNARVPRDTASTT
LQSDKRAKVPRSQGCSRETSPSRMAVASGRHSRSTSALSAVDPLGQSDRFGLIHQAHISA
SVNAMRVLNTGTEVEAAVADALLLGDTRNKRKPMRRRYESPGMFSDDDANSDASSACSER
SYGSRNGAVPHYLRQMEDVAEVLNHCASSNWSERKDGLVGLQNLLKSQRILSRVELKRLC
EIFTRMFADPHSKRVFSMFLETLVDFITIHREDLQDWLFVLLTQLLKKMGADLLGSVQAK
VQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSS
ETRLAVSRIITWTTEPKSSDVRKTLHSWSSEELSGRLSTVPSLPGEGNVEERCKQAAQLV
LIALFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNVGMVSPSNTITRTPPRQPSS
RSSPLTSPTSCCHGGLSPSVMEYDTENLNSDEIYSSLHGVSQAIQSFSYRSQEDLNEPMR
HEGKKNDTAGREGGIGMLPQGSDPRLGADMMEGGRTALDNKTSLLNTPQPRSFSGFRGRE
YSPYCYTDTISAYDKSVPKETVFDDDAEHFRDVPLDHSDLVAELLKELSNHNERVEERKA
ALFELLKITREDRLRVWDEHFKTVLLLLLETLGDKDHTIRALALRVLKEILRNQPARFKN
YAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAI
KMQTKVIERIAKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHL
AQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgacgactggggaagataagaactttgacgacgaagactctgcggatggaagcaggtcc
tgttcctctgcttcgtcatgtaaaggtggacctagggcattttccacaggttctgtgcgc
agacggttctcaggatctggcccgaaggctccagggaaagagggcacgagtgcaggggca
gttgacgaggaggacttcattcaagcctttgaggatgtgcccagtgtacagatttactct
aacaaggagctggaggattccatggccaagatccgtgaagtcctgtctgatgataagcat
gactgggagctccgtgttgcttctctgaagaaagttcggtccctgctcctggctggtgca
gcggagcacgacgggtttttccagcagctccgactacttgaaggcgccttcaagctctca
gccaaagacctccgctctcaggtggtgcgggaggcctgtattactctcggccacctctct
tcagtcctgggcaaccgatttgatcatggtgcagagagtatcatgccaacgctcctgaac
cttgtccccaacagtgccaaggttatggccacatctggcatcgctgctatccgccttatc
atccgacacacccactatccccgactaatccccatcttgaccagcacctgcacttccaag
tctgtggctggccggaggcgctgctatgagttcttagacctcctgctgcaggaatggcag
acgcacccactagagaggcatgttgctgtcctcaccgagactattaagaaagggatccat
gatgctgattcggaagcaagatcggttgctagaaagtgttattggggtttccacggccac
ttcaggagggaggcagagcatctgttccaggcactcgagttgtcgtatcagaaggccctg
cagctgcacctgaagaattcggacagtgttgtgtctctgccgcagtcggaccgctcctca
tccagctcccaggaaagcttgaatcgacccctgtctgctaagagtccggtggggagcagc
atttccagagcaaaagtaacgacctgcaaggccccttccacacccggcaccctccagcgc
tcctgtagtgacatcgatgtcaacgctgccaccaatgccaaggccagaatgacagtggtg
ccctccactgcagcgcccttcacttcagcttccgccctgcctcctggctcctatgcctct
ctagacggcacacccagtaaaccagagggccgtgtgcgcaccagacgtccgacctctggt
agcatggccgttgcaaacactgtcacagacagcagggggcgaagccgagccaaggcttcg
tcgcaatcccagcgatccagatcagctaacccaactggtgccagcagtcgttctggctcc
ccgggcagggtccttggtcatatgaatgcaagggtccctcgggatactgcttctaccacc
ctgcaatcggacaagcgtgctaaggtgccacgcagccagggttgcagccgtgagaccagt
cccagcagaatggccgtggcctccggacgtcactcccgttccacgagtgcactctccgcg
gtcgaccctctgggccagtcagaccggtttgggctgatccaccaggcccacatctcggcc
tcagtgaatgccatgagggtcctaaacactggcacagaggtggaagctgccgttgccgat
gccctgcttcttggagacacccggaataagaggaagcccatgcgaaggcggtacgagtct
ccggggatgttctcggacgatgacgccaacagtgatgcatccagcgcctgctcagagcgc
tcctatggctccaggaatggtgcagtgccacactatctgcgccagatggaggacgtggcc
gaagtgttgaaccactgtgccagctctaactggtccgagcgcaaggatggcctggttggt
ctgcagaacctgctcaaaagccaaaggatcctcagccgcgtggagctgaagaggctctgt
gaaatcttcaccaggatgtttgcagatccacacagcaagcgagtgttcagcatgttcctg
gagacactggtggacttcatcaccatccacagggaagacctgcaggactggctctttgtc
cttctcacacaactgctgaagaagatgggtgctgacctgttgggctctgtccaggccaaa
gtccagaaagccctggatgtcaccagggattcttttccgtttgaccagcagttcaacata
ctgatgaggttcattgtggatcagacgcagacgccgaacctcaaggtgaaagtggccatc
ctgaagtacatcgagtcactggcacggcagatggaccccacggactttgtaaattccagc
gagactcgtttggccgtgtctcgcatcatcacttggaccacagaaccaaaaagctccgat
gtccggaagaccctccatagctggtcaagcgaggagttgtcaggcaggctcagcactgtg
ccctctttgcccggagagggcaacgtggaggagaggtgcaaacaggctgcccagctggtt
cttattgcgctcttcgagctcaatactccagagtttaccatgctgctgggggcactgccc
aaaacattccaggatggggccaccaagctccttcacaaccacctgaagaattccagcaat
gttggcatggtatctccgagcaacaccatcacccgcacccctccccggcaacccagcagc
cgcagcagccccctcacttccccgaccagctgctgccatgggggactgtcacccagtgtt
atggagtacgacacagagaacctgaactcagatgagatctacagctcgctgcatggtgtc
tcccaggccatccagagcttcagctaccgcagccaggaggacctgaatgaaccaatgagg
cacgaaggcaaaaagaatgacactgccggacgggaaggtgggataggcatgctgccccaa
gggtctgacccccgactgggtgcagacatgatggagggtggccgcacagccctggacaac
aagacctcactgctcaatacccctcaaccacgttccttctctggtttccgtggccgggaa
tacagtccctactgctatactgacaccatcagtgcttatgacaagagtgtcccgaaggaa
acagtgtttgatgatgacgctgagcacttccgtgatgtccctctggaccactcagacctc
gtggccgagcttctgaaagagctgtctaaccacaacgagcgtgtggaggagcgcaaggcg
gcgctgttcgaactgctgaagatcacacgggaggaccgcctgcgcgtctgggacgaacac
ttcaagactgtcctgctgctgttgctagagacacttggagacaaagaccacaccatccgg
gccctggcattacgtgtgctgaaggagatcctgcggaaccagccagcccgttttaagaac
tatgcagagctcacaatcatgaaaaccctggaagcccataaagactctcacaaggaggtg
gtgcgggcagcagaggaggcagcgtccaccctggctggctccatccacccagagcagtgc
atcaaggtgctgtgcccaatcgtgcagacagctgactaccccataaacctggctgcgatc
aaaatgcagacgaaagttatcgagcgcatcgccaaagagtcgctgcaccagctgctgcct
gacatcatccccgggctcctgcagggctatgacaacacggagagcagtgtgcgcaaggcc
agcgtcttctgcctagtagccatctactcagtcattggtgaagagctgaagccccacctg
gctcagctgacaggcagcaagatgaagctactgaacctgtacatcaagagggcccagacc
accaacagcaacagcagcagctcctcagatgtgtccacacacagctaa
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