Scleropages formosus (Asian bonytongue): 108930936
Help
Entry
108930936 CDS
T04919
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03015
mRNA surveillance pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108930936
09122 Translation
03013 Nucleocytoplasmic transport
108930936
03015 mRNA surveillance pathway
108930936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108930936
03041 Spliceosome [BR:
sfm03041
]
108930936
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108930936
Spliceosome [BR:
sfm03041
]
Complex C
Other components
EJC/TREX
108930936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
108930936
NCBI-ProteinID:
XP_018601947
LinkDB
All DBs
Position
11:complement(28270280..28296871)
Genome browser
AA seq
1582 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLPKSGQKNALIKRLKGALMLENLQRTSTPH
IGLQPNSQMGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAEADGEKQNTDSAVAPEEE
DHTEGNNIASCPVEEQPSLSSRTMFGQPEDDDGDETMTQDVDRAKEDMETAIPSAPLSHR
RALIQHASERQTEAPSAFSSLAPEPGPQEAPEVPRGRAHRSSSSRLSHEEPSTLEAATGA
APPRAVASLSVRVVGDHAKEGSAQSGSASPHSTPQLGRSARGSGFGQDESEEEDDSDEDE
DWGVGAARRGAGRGQPHSNLQSLRERSRRKQLPPQHIPPPQLPHQAPLQLRQPTPPPSPP
PELSFPLPDTPKQSPPGLDEPEGAAAAAAAGSAERVGSPPSLQRQESSSSSGSSGSSSPE
PSHQRGPGPLTLLALKMESEGAFARGRERSRSEDDEQKTGAPDAGESASPALESPGEGRQ
ERTAPPVIHAGSVDSQSPSPADIPTVHGRKSEATMMFAAKDLTTSTILCTSFSREDSASA
TFVTAPVEDQKEEKEPGKPQEDTAKLSEVGEPKLSGGKGEEEVQVSSVAAGKERESCLPP
WKRGRELGAPVSGPSSPAQGEKEEPLVSRVPGRQSEAPESQAPTALSPQPPSKKFRLLRD
MPASSPPASPPSVSSAVVKHTGVSPEAPPAGLQARLISPPPDEGHRSSRSLDAESGGVPI
DPLALVSDKTAVSGGQVTEPAASHVEGGMAEAHSEGKVPSGKPGSQLGSEKGLSDTAGQA
HVRTAKPVEGEKPGQQLAAEAPVGPVLPPSPPSEEGDVEREKERSSSSSSNSSSSDSDSE
SSSSRSSESSSSSRDKSRSAAGSRNLGGKKRDGKIASQQDTPGSPRRKRRAEQQLQEAEE
AEGASQSKKPCPGQDGTDQDKTLEMKAVGIKRDSSARELKQAAMSEPADSAMQVDAHSES
EGAGVQPHPDSHGASESNEGRSEESATPKSFTARKISLNTASKPSLCVGGTAQTAASSTA
LPESETGGQAARKRRWGSSTVVTAKKPSISITTDSLKSLIPDIKPAAGAGPQEAIVDLHP
DEGHLSADEEAADRGERGDQGLEKGLKIRRTVTQVVPAENQRTGRRTRKEEDEDEERQSD
RVVLEEGKDGSAEVALETQVVPSARETEVKKVTPSDTLVRRSISQQKSGVSITIDDPVRS
TKQPSPPRGKITNIVHICNLVRPFTLGQLKELLNRTGTVVEEGFWIDKIKSHCYVTYSST
EEAVATRAALHGVKWPQSNPKFLSVDFSEQDELDFHRGLLTVERSGGEEERSVPAGPPSG
PPGRPGTLPPLMPERQQRERGSGGVRDQWAEREREMERRERTRAEREWDRDKVRDFGKPG
EERESAARRSRSRDRERRRKERAKSKERKTEKKEKAPEEPPAKLLDDLFCKTKTAPCIYW
LPLTEEQAAQRGAERAERMKEREKRRKELQEEEDKKREEERKERVKGREKEGGAVPSTGV
GVPAELQRGTGRERDRDRGRDSRDRDRDREGDKRRDSYRARAAESKAEGGAKGGLGGGLS
GLGGGRRSRSRSNPPSSRDRRR
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcgaagacgtaacgctggatgggaagccgcttcattcgctccgggtggcg
gatttgaaagccgccttggagcagcggggtcttcccaaaagcgggcagaaaaatgcactt
attaagcgactaaagggggctctgatgctggagaacctgcagagaacctccactccacac
attgggctccagcccaattctcagatgggggaggaaatgagccagaacagctttataaag
cagtacctggccaagcagcaggagctcctcaggcagcggctggagcgggaggctcgggag
gctgctgaagcggacggtgaaaagcaaaatacggacagtgccgtagcacccgaagaggaa
gaccacacagagggtaacaacatcgcttcctgtccagtagaggagcagccctcattgtcc
tcacgtaccatgtttggtcagccagaagatgacgacggggatgaaacgatgacccaggac
gtcgatcgagccaaagaagacatggaaactgccataccttctgctcccctgtcacaccgc
agggcactgatacaacacgcctcagagagacaaacagaagcgccctctgccttcagttca
cttgcccctgaacctggaccccaggaggcccctgaggtccccagaggcagagctcaccgc
tcctcctccagccgcttgagtcatgaggagccttcgacactggaggcagccacaggagct
gctccaccccgtgctgtagcctctctgtctgtccgtgtcgttggggaccatgcaaaggag
ggctctgcccaatcggggtctgcttcaccccattccactccgcagcttggccggtctgcc
cggggatctggattcgggcaggacgaaagcgaggaagaagatgacagcgatgaggatgaa
gactggggtgttggggctgccaggaggggtgccggtcgaggccagccccacagcaacctg
cagtcgttgcgagagagatccaggcgtaaacaactgcccccacagcatatacccccaccg
caactaccccatcaggccccgctacagctgcggcaacccactcccccaccatctcctcca
cctgagttgtccttcccgttgcctgacacaccaaaacagagccctcctggcctggatgag
cctgagggggcagcagctgctgcagcagcaggaagtgcagagagggtgggatcgcccccc
tctcttcagcgccaggagagtagctcgagttccggcagctctggttccagcagtccagaa
ccttctcatcagcgtgggcctggcccgctcaccctcctggcccttaagatggagtctgag
ggggcatttgccaggggacgagaacgcagccgctccgaggatgacgagcagaaaaccggt
gcccctgatgccggagaatctgcctccccggctttggaatccccaggtgaagggcgccaa
gagagaacagcacccccggtcatacatgctggaagtgtagattctcagtcgccgtcccct
gctgacattcccactgtacacgggaggaagagcgaggcaacgatgatgttcgctgcaaaa
gatctgacgacttccaccattctttgcaccagcttcagcagagaagattccgcctcagcg
acgtttgtgacggcacctgtagaagatcagaaggaagagaaagaaccaggcaaaccccag
gaagacactgcaaagctgtcggaggtgggagaacctaaactctcggggggaaagggggaa
gaggaggttcaggtttcttccgtggcagctgggaaagagagagagagctgtcttcctccg
tggaagcgtgggcgagaacttggggctccggtgtccggcccctcttctcccgctcagggt
gaaaaagaggagcccctcgtaagccgagttcccggaagacaatctgaggcaccggagagt
caggctcccacagccctatcgcctcagcccccttccaaaaagttccgcttactgcgtgac
atgcctgcttcttctccacctgcctcaccgccctctgtgtcctcagctgttgttaagcat
actggcgtttcacctgaagcccctcctgcagggctgcaagcccgactcatctccccaccc
ccagatgagggacacaggagcagtaggagccttgatgcagagagcgggggggtgcccatc
gatccactggctctcgtgagcgataaaacagctgtctcaggcgggcaggtcacagagcct
gcagcgtcccacgtggaggggggaatggcagaggcccacagtgagggtaaggtgccttca
ggcaagcctggatcccagttagggagtgagaaggggcttagcgacactgctggtcaggca
catgtgaggacagctaagccagtggagggtgagaaacccgggcaacagttggctgcagaa
gcccccgtggggcctgtgcttcctccgtcacccccatcagaggaaggcgatgtcgaacga
gagaaggagaggtcttcatcatcatcctccaactcttcgtcctctgattctgacagcgaa
tcgtcatcttcacgttcttctgagtcgtcgtcctcgtcaagggacaaatcccgctccgca
gctggcagcagaaatcttggtggcaaaaagagagacgggaagattgcctctcagcaggac
acaccgggcagcccccgtcgcaagaggagagcagagcagcagctgcaggaggcagaggag
gctgaaggtgcaagtcaaagcaagaagccttgtcctggccaggatggaacagatcaagat
aaaacattagagatgaaagcagttggaatcaagagggactcctcagccagggagttgaag
caggctgctatgtcggagccggctgactctgcgatgcaggtggacgcacactcagagtcg
gagggcgcaggggtacagccgcaccctgacagccacggggcttcagagagcaatgagggc
cgctcagaggagagtgctacaccaaagtcattcactgcccgaaagatctcgttgaacaca
gctagtaagccctccctgtgtgttgggggcacggcgcaaacggcagcctcctccacggct
ctaccggagtccgagaccgggggccaggcagctaggaagagaaggtggggctcgagcact
gttgttactgccaagaagccgtccatcagcatcaccacagactcactgaagtctctaatc
ccagacatcaagccagccgcaggcgccgggccacaggaggcgatagtggacctgcacccg
gatgaggggcacctctccgcagatgaggaggctgctgatcgaggcgagaggggggaccaa
ggcctggaaaagggcttgaagatcaggcgcacagtaacgcaggtggtgcctgctgaaaac
cagagaacgggcagaaggacaaggaaggaagaggatgaggatgaggaaagacaaagtgac
agggttgttctggaggaggggaaagatggctctgctgaggtcgccttggaaacgcaagtg
gtgccttcggcccgtgagactgaagtaaagaaagtcacacctagtgacactttggtgcgt
cgctccatcagccagcagaagtcgggcgtctccattaccatcgacgaccctgtccgaagc
acaaagcagccttcgccaccacgtggcaagatcacaaacattgtccacatctgtaacctg
gtaagacctttcactctgggccagctgaaggagctgctgaaccgaaccggaactgtggtg
gaagagggtttctggatcgacaagatcaagtcacactgctatgtgacatactccagcaca
gaagaggcagttgccacacgtgccgcacttcatggagttaagtggccccagagcaatccc
aaattcctcagcgtggacttctcagagcaggatgagctcgacttccacagaggtctcctg
actgtagaacgcagcggtggggaggaggagcgcagcgtccctgccgggcctccctccgga
cccccgggtcggccggggacgcttcctcccttaatgcccgagcgacagcagcgcgagcgc
ggcagcggaggagtgcgcgaccagtgggccgagagggagcgcgagatggagcgcagagag
aggacccgtgccgagcgagagtgggaccgagacaaggtgcgggacttcggcaagccgggg
gaggagcgagagagcgcagccagacgctctcgctcgagggacagagagaggaggcgcaag
gagagggccaagagcaaggagaggaaaacggagaagaaagagaaggccccggaggagccc
cccgccaagctgctggatgacctgttctgtaaaaccaaaacggcgccctgtatatattgg
ctccccctcacagaagagcaggcggcgcagcgaggagcagagcgcgccgagcgcatgaag
gagcgcgagaagcggaggaaggagctacaagaggaagaggacaagaagcgagaggaggag
cgcaaggagagggtgaagggcagagaaaaagagggcggggctgtgcccagcacgggggtg
ggggtaccggccgagttgcagagggggacagggagagagcgggaccgcgaccggggtcga
gatagtagagatagggatagggatagagagggggacaaaaggcgagactcgtaccgcgcc
cgtgcggccgagtccaaagctgaaggtggcgccaaaggggggctcggcgggggcctgagt
gggcttggcgggggccggcgctctcgcagtcgtagtaaccccccctcgtcccgggaccga
cgccgctga
DBGET
integrated database retrieval system
