Scleropages formosus (Asian bonytongue): 108930940
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Entry
108930940 CDS
T04919
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03420
Nucleotide excision repair
sfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108930940
09124 Replication and repair
03420 Nucleotide excision repair
108930940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfm03051
]
108930940
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108930940
Proteasome [BR:
sfm03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108930940
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108930940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
CUE
Dsc3_N
UBA_3
Ubiquitin_5
ACT_5
Motif
Other DBs
NCBI-GeneID:
108930940
NCBI-ProteinID:
XP_018601952
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Position
1:complement(24782738..24791277)
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AA seq
413 aa
AA seq
DB search
MRSGREQSPVCLCLRGKCRTTGRDELATADKSIPKSSCRTRKRLFTVTRMQITLKTLQQH
TFKIDIDGEETVKALKERIENEKGKDSFPAAGQKLIYAGKILNDDTALKEYKIDDKNFVV
VMVTKPKATPSTSQPTPPATATAPNNAAPTLTTAPSTASDQVSQEDKPTQEKPPSSTPPV
SSSGGLANIFEEATSALVTGQQYENMVSEIMLMGYEREQVVAALRASFNNPDRAVEYLLT
GIPAERERHTVHGSAVTPASGASTVSPASSGTPVQPAAATGANPLEFLRNQPQFLQMRQI
IQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQMLNEPAQGVGGQGAGGAGSEAGGGA
MNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtggacgcgagcagagtccagtctgtttatgcctacggggtaaatgtcggacg
acaggacgtgatgagctagcgacagcggacaaaagcataccaaagagctcctgtagaaca
aggaaacgactctttactgtcaccagaatgcagatcaccttgaaaactcttcagcaacac
actttcaaaatcgacattgacggggaggagacggtaaaggcactaaaggaaaggattgag
aatgaaaaaggaaaagatagttttccagctgctggacagaaattgatatacgcaggcaaa
attctcaatgatgacactgcactcaaggagtataagattgatgacaagaactttgtggtt
gtcatggtgacaaagcctaaagcaaccccatcaaccagccagcctaccccccctgccaca
gcaacagcacccaacaatgcagcccccacactcactactgccccttctaccgcatctgat
caagtgagccaggaggacaaacctacgcaggagaaacccccaagtagtactcctcctgtt
agttcatctggtggcttagcaaacatttttgaagaggctacttctgcccttgtgactggc
cagcagtatgagaacatggtgtcagagatcatgctgatgggctatgagagggagcaggtg
gtagctgcgttgagagccagcttcaacaacccagacagagcagtggagtacctgctgacg
ggtattccagcagagagagagcgccacacagtgcatggctcggctgtgacccctgcaagt
ggagcttcaactgtgtcaccagcctcaagcggtactccagtgcaacctgctgctgctaca
ggggccaacccactcgagttcctgcgtaatcaacctcagttcttgcagatgagacagatt
atccagcagaatccatctctgctaccagccttgctacagcagattggaagggagaaccca
caacttctacagcaaatcagcagtcaccaagaacagtttatccagatgctgaatgaacca
gcccaaggggtgggaggacagggtgcaggtggggctggatctgaggctgggggtggagcc
atgaactacatccaagttacaccacaggaaaaggaagccattgaaaggctaaaagcattg
ggattcccagagggacttgttatacaagcatactttgcttgtgagaagaacgagaacttg
gctgcaaacttccttttgcaacaaaactttgacgacgattaa
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