Scleropages formosus (Asian bonytongue): 108931082
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Entry
108931082 CDS
T04919
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108931082 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108931082 (smarcd1)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108931082 (smarcd1)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108931082 (smarcd1)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108931082 (smarcd1)
PBAF complex
108931082 (smarcd1)
GBAF(ncBAF) complex
108931082 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
108931082
NCBI-ProteinID:
XP_018602198
UniProt:
A0A8C9V0U5
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Position
22:complement(13278484..13298472)
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AA seq
513 aa
AA seq
DB search
MAARGSFQTPATGGGGGGMGPGPPVTGGAPGMGPGTPSGRMGPSTGAQNHLYRSPMPGPG
YPRPGMPPSNRMTPQGPSMGPPGYGASPVSRPGMPVMDPSRKRPAPQQIQQVQQQSRNQH
AKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKL
RIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVI
ELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLA
RILGIHTQTRPVIIQALWQYVKNHKLQDPHEREFINCDKYLHQIFETPRMKFSEIPQRLH
ALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDN
KIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFY
FQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgtggtagcttccagacgccggcgactggaggcggtggtggaggaatgggc
ccgggacctccagtaaccggtggtgcaccgggaatgggcccagggactccgtctggaaga
atgggaccctcgactggcgcacagaaccatctgtaccgttcgccgatgcccgggcccgga
tacccgagacctggaatgccaccatcaaaccggatgactcctcaaggcccgtcgatggga
cccccaggctatggcgctagccccgtgtcacggcccggtatgccagtcatggacccatcc
cgaaagagacctgccccccagcagatacagcaagtgcagcaacagagccgcaatcaacat
gccaagaagaagaagatggctgataaaattctacctcagaggatcagagagctggtccca
gagtctcaggcttacatggacttgctggcatttgaaaggaaacttgaccagacaataatg
cgaaaaagactagacatacaggaagcactgaaaagacccatcaagcaaaagagaaaactt
cgcatttttatttccaacaccttcaacccagcaaagccagatgcagaggatggggagggc
actgttgcctcatgggaacttcgagtggaagggcgactgctggaggatactgctgtgtcc
aagtatgaagccactaaacagaagaggaaattctcttctttcttcaaatcactggtgatc
gagttggataaagacctctatgggcctgataatcacttggtggagtggcacaggaccgcc
accacacaggagacggacggcttccaggtgaagaggccaggcgatgtgggtgtgcgctgc
actgtgctgctcatgctggactaccagcctccacagttcaagttggaccctcgtcttgct
cgcattttgggaatccacactcaaacacgacctgtcattatccaagcgctgtggcagtat
gtcaaaaatcacaaactgcaggatccccacgagagagaattcatcaactgtgacaagtat
ctgcaccagatatttgaaaccccacgtatgaagttctcggaaatcccgcagcgcctgcat
gccctgttgatgcccccggagccaatcatcataaaccatgtgatcagtgtagaccccaat
gaccagaagaagaccgcttgttacgacattgatgtggaggtggatgacacgctgaagaca
cagatgaactccttcctgttgtcaactgctagccaacaagagatagctggcctcgataac
aagatccatgagaccattgagactatcaaccagctgaagacacagagggagttcatgctg
agctttgccagagacccccagggcttcatcaacgactggcttcagtcgcagtgcagagat
ctcaagaccatgacagatgtagtgggaaatcctgaagaggagcggagagcagaattctac
tttcagccctgggctcaagaagctgtatgtcgatacttctactccaaggtgcagcagaga
agacaggaactggagcaggctcttgggatcagaaacacatag
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