Scleropages formosus (Asian bonytongue): 108931448
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Entry
108931448 CDS
T04919
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108931448 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108931448 (msh2)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108931448 (msh2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
108931448
NCBI-ProteinID:
XP_029106355
UniProt:
A0A8C9TWM7
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Position
3:complement(4630018..4642954)
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AA seq
932 aa
AA seq
DB search
MAVQPKQSVSADSVGDLGFLSFYWSMAEKPDTTVRVFDRNEYYTVHGKDALLAAREVFKT
NGVIKHLGSGDRKLEGVVLSKMNFESFVRDLLLVRQYRVEVYQNKAGSKSSKEHDWQLAY
KASPGNLTQFEEILFSGGGASGAVAAGVVGVRLGSGDSQRVVGVGYVDSTLRKLGVCEFP
DNDQFSNLEALLVQIGPKECVLPAGDAVGDVAKLRQVVQRGGVLVSDRKRTEFTTKDAVQ
DLNRLLRTRKGDVVSSAALPEMEKQIAMSSLAAVIKYLELLSDESNFGSFQLTSFDLSQY
MRLDNAAVQALNLFQGSHDNSAGTHSLAGLLNKCRTPQGQRLLNQWLKQPLMDKNKIEER
LDLVESFVEDAELRQICHEDLLRRFPDLNRLAKKFHRQSCTLQDCYRVYQAVAQLTGLIE
ALERHSGSHQVLLNAAFISPLSDLNTDFSKYQEMIETTLDMNQIENHEFLVKPSFDPTLT
ELRDTMDRLEKDMQVSLNVAARELGLDAGKTVKLESNAQLGYYFRVTCKEEKSLRNNKKF
TTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIASGYVEPLQTLNEVI
AQMDAVVSFAVVSHSAPVPYVRPTVLEKGSGRLVLTAARHPCIEAQDDVAFIPNDVSFIR
GQEMFHIITGPNMGGKSTYIRQVGVIVLMAQVGCFVPCDSAEVSVVDCILARVGAGDSQI
KGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEHIATRCRSFCL
FATHFHELTALAQQVPTVHNLHVTALTTDHTLTMLYKVQKGVCDQSFGIHVAELANFPKH
VIASAQQKALELEEFQDVTWVGNEDSGPDAKRRCLERQEGEKIIEDFLTKVKALPTSHMS
DQDIKEELKKLKAQVVAKNNSFVNEIVSRSTV
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaagcagagcgtgagcgcggatagcgtgggggacctcggatttctg
tccttctactggtccatggcggagaagccggacacgacggtgcgcgtgttcgaccgcaat
gagtactacacagtgcacggcaaggacgcgctgctcgcggcgagggaggtgttcaaaacc
aacggggtcatcaagcacctgggctcaggggacaggaaactggagggtgtggtcctcagt
aagatgaacttcgagtcgtttgttcgcgacctgctcctggtgaggcagtaccgcgtggag
gtctaccagaacaaggccggcagcaagagcagcaaggagcatgactggcagctcgcctac
aaggcatctccaggaaacctcacgcagtttgaggagatcctgttcagcgggggcggggct
tcgggggcagtggcggcaggtgtggtcggcgtgcgcctcggctccggggacagccagcgc
gtggtgggcgtcggctacgtggactccactctcaggaagctgggggtctgcgaattcccc
gacaacgaccagttctcgaacttggaggcgctcctggtgcagatcggacccaaggagtgc
gtgctgcctgcgggggacgccgtgggggacgtggccaagctgcggcaggtggtccagcgt
gggggcgtcctcgtctccgacaggaagaggacggagtttaccaccaaggatgctgtgcag
gacttgaaccgcctgctgcggacgcggaagggggatgtcgtgtctagcgctgctctcccc
gagatggagaaacagatcgccatgtcctcccttgccgctgtcatcaagtacctggagctc
ctgtctgacgagtccaacttcggctccttccagctgacctccttcgacctcagccagtac
atgcgtttggataacgctgctgtccaggcgctcaacctcttccagggttcccatgacaac
agcgcaggcacacactcgctggccgggctgctcaacaagtgccggacgccacagggccaa
cgactgctgaaccagtggctcaaacagcccctcatggacaagaacaagattgaggagagg
ttggacctggtggagagcttcgtggaggatgccgagctcaggcagatctgccacgaggac
ctcctgcgccgtttcccggacctcaaccgcctggccaagaagttccacaggcagagctgc
acattgcaggattgttaccgtgtgtaccaggctgtggctcagctgacgggcttgattgag
gcgctggagagacacagcggaagtcatcaggtcctcttaaacgcagcgttcatctcacct
ctcagtgatctgaacacagacttctccaaataccaggagatgattgagacaacgctggat
atgaaccagattgagaaccatgaattcctggtgaagccgtccttcgacccgacgctcact
gaactccgggacaccatggaccggctggagaaggacatgcaggtctcgctcaacgtagcc
gctcgagagctggggctggatgccgggaagacggtgaaactagagtccaacgcccagctg
ggttactacttcagggtcacctgcaaggaggagaagagcctacgcaacaacaagaagttc
acgaccctggacgtccagaagaacggggtccgattcaccaacagcaagctgagctccttg
aacgaggagtacaccaagagccgggaggagtatgaggaggcccagaatgccatcgtcaag
gagatcatcagcatcgcttcaggttacgtggagcccctgcagaccctgaatgaggtcatc
gcccagatggatgcagtggtgagcttcgcagtggtgtcccactcggctcctgtaccctac
gtacgtcccacagtgctggagaagggctctgggcggctggtgctgactgcagcccgacat
ccctgcatcgaggcccaggatgatgtggccttcatccccaatgacgtgtccttcatacga
ggccaggagatgttccacattatcactggccccaacatgggaggtaagtccacctacatc
cgacaggtgggcgtcatcgtgctgatggcccaggtgggctgcttcgtgccctgcgactca
gctgaggtgagcgtggtcgactgcatcctggcccgggtcggtgccggagacagccagatc
aagggtgtgtccaccttcatggccgagatgctggagacggccgccattcttcgctcggcc
acggaggactccctcatcatcatcgacgaacttggtcgcggcacctccacctacgatggc
ttcggcctggcgtgggccatctcggagcacatcgctacacgctgccgctccttctgcctg
tttgccacacacttccacgagctgaccgccttggcccagcaggtgccgaccgtacacaac
ctgcacgttacggcactgacgaccgaccacaccctgaccatgctgtacaaggtgcaaaaa
ggcgtctgtgaccagagttttgggatccatgtagctgaactggccaacttcccgaaacac
gtgatcgccagcgcccagcagaaggctctcgagctggaggagtttcaggacgtcacatgg
gtggggaacgaggacagtggccctgatgccaagaggaggtgtttggagagacaggaggga
gagaagatcatcgaggatttcctgaccaaggtgaaggctctgcccaccagccacatgtca
gaccaggacatcaaggaggagctgaagaagctgaaagcacaagtagtggccaagaacaac
agctttgtgaatgagatcgtgtcccggtccacagtctga
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