Scleropages formosus (Asian bonytongue): 108931561
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Entry
108931561 CDS
T04919
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04510
Focal adhesion
sfm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108931561
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108931561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108931561
NCBI-ProteinID:
XP_018602919
UniProt:
A0A8C9RRK3
LinkDB
All DBs
Position
2:complement(20739963..20764579)
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AA seq
1784 aa
AA seq
DB search
MLIFYVAAALYCGTCVRAQLPELSDMCTEGSCYPATGDLLIGRSHQLSASSTCGLRHPEP
FCIVSHLQDQKKCFVCDSREKYDERMNRTNSHRVENVVTTFAPNRLKTWWQSENGLENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKAWQVYRYFAYDCEAFFPTISRGPM
KNVDEIICDSRYSDIEPSTEGEVIFRVLDPAFKIDDPYSSRIQNLLKITNLRVNFLKLHT
LGDNLLDSRREIKEKYYYALYDMVVRGNCFCYGHASECAPVDGAGEDVEGMVHGHCVCNH
NTMGLNCEKCKDFHHDLAWRPAEGRNTNACKKCNCNQHSYSCHFDMAVYKATGNVSGGVC
DDCQHNTIGQNCEQCKPFFFQHPERDIRDPNICEPCSCDPLGSLDGGICDRMTDVVSGLI
AGQCRCKANVEGERCDQCKQGYYGFSDDPLGCQECTCNPLGTIPGGSPCNTDTGSCYCKR
LVTGRNCDQCLPQHWGLSNDMDGCRPCDCDPGGSVNNDCSVMTGQCHCLEHVFGRQCNQV
ESGFYSIDLDHYTYEAEHSKFSPGVSLVQRVHPQDRTPTWTGTGFASVPEGGYLEFNIDN
IPSSMEYDILIRYEPQLPDQWEEALTTVIRPSAIAVDSPCSNTIVDDDNQMVSLHPGSRY
VVLPRPVCFEKGQNYTIRLSLPLYSTLVHVQSPYTLIDSIVLIPHCKSLEIFSGTEGGNV
VTNSAWDTFQRYRCLENSQSAVKTPMTDICRSYIFSVSSLLHQGALVCQCDPQGSLSTIC
NPSGGQCPCRPNVVGRNCDKCAPATFLFGPTGCRPCECNSQGSLNPFCEEETGQCRCVSG
AYGRQCDRCLPGHWGFPHCRPCSCNGHAEQCHPQTGECLGCRDHTTGHSCERCLSGYFGD
PLLGSGDHCRPCLCPDGPGSGRQFARDCYQRPEGYQVFCVCNLGYKGPRCEECAPGFYGN
PHEVGGQCLPCECNNNIDMLDAGSCDARTGVCLKCLYHTEGESCHRCKPGYHGDALAQSC
RKCMCNSRGTRNDSCPLSRECHCDHSSGQCPCLPNVMGQSCDHCAPDTWNLPSGTGCEPC
DCDPKHSFGMSCDTLTGQCSCKPGFGGRTCRECRELFWGDPEVKCHACDCDPRGIIQEQC
HKMTGRCVCVEGVAGSRCDTCARGYSGEFPNCVRCHECFAEWDQVIGDLANKTQQLVKKV
DTIRVSGLTGPYQETISKMEKSANTIRAILAEHPAAQPLTEIQELLQQATQLVTEMTNKL
NTTEEIFSQISADSNSTDIKLDSVTEDSQKLERMVKELQDQVEFVKNSDVRGAMDSITKY
FQQSMDAEARVNASTSDPDSAVQQSASLRQLTEDRMNKTRQQFEQNQEDHARRLDNLAGE
LQSLDLSALSDKMCGPLEGPESCADSPCGALSCQNEDGTRRCGGEGCDGLVTLAHNTWQK
AKDFDREIHSALEEVDKLSKMVSEAKVKADHAKASAQDVLLKSNETKQRVDQSNEELRLL
IQQIRDFLTQDGADPDSIEAVATEVLQMQLPTTAAQLQNLTEEIRERVDSLTEVEVILDQ
SASDIQQAKALLHEARKASKEAMDVKATAMMVKEALEEAGRAQGAATEAIQQAKSNIQGT
QDLLTSMESETADSEYKLSSATQRLVQLEQDMALIKQKTTENIVRTEETEQSAERINQEA
EQVKQALDTELKDKYNSVEDLIEQKAGGVASAKKRAEQLQQEAKELLSQASSKLQQLKDL
EKSYEVNQHTLEAKAAELVELERAIRELLNDISHKVTVYSTCLF
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgttaatattttacgtcgccgcggcgctctactgtgggacgtgtgtccgcgcccagctg
cccgagttgagcgacatgtgcacggagggcagctgttacccggcaacaggcgacctgctc
attggccgctcgcaccagctgtccgcatcctccacctgtgggctccggcatccggagccc
ttctgcatcgtgagccacttacaggatcagaagaagtgctttgtgtgcgactcaagggaa
aagtacgacgagaggatgaatcgcactaacagccacagagtcgagaacgttgtgacaacg
ttcgccccaaaccgcctgaaaacctggtggcagtcagaaaatgggttggagaatgtgacc
atccagctgaacctggaggccgagttccacttcacacacctcatcatgactttcaagacg
ttccgcccagctgctatggtgattgagcggtcgtcggactttggaaaggcatggcaggtg
tatcgctactttgcgtacgactgcgaggcgttcttccctaccatctcccgtgggcctatg
aagaatgtggatgaaatcatctgcgactcgcgttactcagacatcgagccatccacagag
ggggaggtcatctttcgtgttttggatccagcgtttaaaattgacgatccctacagctcc
aggattcaaaacttgttgaagatcaccaacctgcgagtgaacttcttgaagctgcacaca
ctaggggacaaccttctggactcacgcagggagatcaaggagaagtattattacgcatta
tatgacatggtggttcgtgggaactgcttttgctatggccacgcctctgagtgtgctcca
gttgacggtgccggagaggatgttgagggcatggttcacggacattgcgtgtgcaaccat
aacaccatgggcctgaactgcgagaagtgcaaggactttcaccatgacttagcctggagg
ccagctgagggtcgcaataccaatgcctgcaaaaagtgcaactgcaaccagcactcatat
tcatgtcactttgacatggctgtatacaaagccacgggcaacgtaagtggaggagtgtgt
gacgactgccagcacaacaccattggccaaaactgcgagcagtgcaagcccttcttcttc
cagcaccctgagagggacatccgtgaccccaacatctgcgagccctgcagctgcgacccg
ttgggttccctcgacggcgggatttgcgatcgaatgacagacgtggtgtcgggcctcatt
gccgggcagtgccgctgcaaggccaacgtggaaggcgagcgctgtgaccagtgcaagcag
ggctactatgggttcagtgacgatccactaggctgtcaggaatgcacctgcaaccccttg
ggcactattcccggaggaagcccctgcaatacagacactggaagctgttactgcaagcga
cttgtgactggcagaaactgtgaccagtgtctgccacagcactgggggctcagcaatgac
atggatggctgccggccgtgcgactgcgatccaggcggaagcgttaataatgactgctct
gttatgactggacagtgtcattgccttgagcatgtattcggccgccagtgcaaccaggtg
gaatctggcttctactcaattgacctggatcactacacatatgaggcggagcactccaag
ttcagcccgggtgtgagcctcgtccagagagttcatccccaagacaggactccgacttgg
actggaacagggtttgcaagtgtccccgaaggtggatatctggaattcaacattgacaac
attcccagctcaatggagtatgacatcctgatccgctatgagcctcagctgcccgaccag
tgggaggaggcacttacaacggtgatccgacccagtgccatcgcagtggacagcccttgt
tctaacaccatagtagatgatgacaaccagatggtgtcacttcaccctggctccagatac
gttgtcctgccgaggccagtgtgttttgagaaaggacagaactacaccattcgattgagt
ttgccgctctactccaccctggttcacgttcagtctccctatacactcattgactccatt
gtgctaataccccactgcaagagcctggagatcttttctgggacagaagggggcaatgtt
gtgaccaacagtgcctgggatacattccagcgctaccgctgcctggagaacagccagagt
gcggtgaagacacccatgactgatatttgcagaagctacatcttcagtgtgtcttcattg
ctgcaccaaggggcactggtctgccagtgtgacccgcagggctccctgagcaccatttgt
aaccccagtggggggcagtgcccgtgccgccccaacgtggtgggaaggaactgtgataag
tgcgccccggcaaccttcctgtttggacccaccggctgcaggccatgcgagtgcaactct
cagggttccctgaacccattctgtgaagaggagactggacagtgccgatgtgtgtcaggg
gcctatgggcgccagtgtgaccgctgcctcccgggccactggggcttcccgcactgccgg
ccgtgctcatgcaatggccacgcggagcaatgtcacccccagactggcgagtgcttgggc
tgccgggaccacacaaccgggcacagctgtgagaggtgtttgagtggctacttcggggac
ccgctgctggggtccggggatcactgccgaccctgtctgtgtcccgatgggccaggctct
ggccgacagtttgctagagattgctaccagaggccagagggctatcaggtgttctgtgtc
tgcaacctagggtacaaaggtcctaggtgcgaggaatgtgcccctggtttctatggaaac
cctcatgaggtgggtgggcagtgcctgccatgtgagtgcaacaacaacattgacatgctg
gacgcaggctcctgcgatgctcgcacaggcgtgtgcctcaagtgcctgtaccacacagag
ggagagtcctgccaccgctgtaagccgggataccatggagatgcgcttgcccagagctgc
aggaagtgcatgtgtaactcccggggcaccaggaacgacagctgccctttgtcccgggag
tgccactgtgaccactccagcgggcagtgcccatgtcttcccaatgtcatgggccagagc
tgcgaccattgtgctcctgatacatggaaccttcccagcggcaccgggtgcgagccgtgt
gactgcgacccgaagcactcgttcggaatgtcctgtgacactctgacaggccagtgctcc
tgcaagcctgggtttggggggagaacatgccgtgaatgcagagagctgttctggggtgac
cctgaggtgaagtgccacgcctgtgactgcgacccacggggcatcatccaagagcagtgc
cacaagatgacaggccgctgcgtctgtgtcgaaggcgtggccggatccaggtgtgacact
tgtgccaggggctactcgggtgagttccccaactgcgtgcgctgccacgagtgctttgct
gagtgggaccaggtaatcggtgacctggccaataagacccagcagctggtgaagaaagtg
gacaccatcagagtcagcggcctcaccggaccctaccaggaaactataagtaaaatggag
aagagtgctaacaccatacgagccatcctggctgagcatccagcagcccagcctctcacc
gagatccaggagctgctgcagcaagccacacaattggtgacagagatgaccaacaaactg
aataccacagaagaaatcttctcgcagatctcagcagacagcaacagcacggatattaag
ctggactccgtcactgaggattctcagaagctggaaagaatggtgaaggagctacaagac
caggtggagtttgtgaagaattctgatgtgcgcggagcgatggatagtattacaaagtac
ttccagcaatccatggatgccgaagcccgcgtgaatgcctccaccagtgacccagacagt
gcagtccagcagtcggcttcgctgcgccagctcacggaggataggatgaacaaaacaagg
cagcagtttgagcagaaccaggaggatcatgccaggagactggacaatcttgctggagag
ctgcaatctcttgatctgtcagcactcagtgacaagatgtgcggtcctctagaaggacca
gaatcctgtgcagattcaccctgtggggccctgagctgtcagaacgaggacggaactagg
aggtgtggcggagaaggatgtgatggtttggtcaccctggcacataacacctggcagaag
gccaaggactttgacagggagatccacagtgcccttgaggaggtggacaagctctccaag
atggtgtctgaggccaaggtgaaggctgatcatgcgaaagccagcgctcaggatgtcctg
ctcaagagcaatgagaccaagcagcgtgtggatcagagcaacgaggagctgcgcttgctc
atccagcagatccgagacttccttactcaagatggcgcagacccagacagcatcgaagcg
gtggccactgaggtgctgcagatgcagttgcccacaacggcagcccagctgcagaacctt
accgaggagatccgggagcgtgtggactccttgacggaggtggaggtgatcctggaccag
agtgcatcagacatccagcaggccaaagctctactgcatgaagctcgcaaggccagcaaa
gaggccatggatgtgaaggccacagccatgatggtgaaggaggcactggaggaggcgggc
cgtgctcagggtgcagcaaccgaagccatccaacaggccaagagtaacattcagggcacc
caggatcttctgacctcgatggagtcagagacggcagactctgagtataaactgagcagc
gccacccagaggcttgtacagctagaacaggatatggctctgataaaacagaaaaccacg
gaaaatatcgtccgcactgaggagacagaacaatctgctgaaagaatcaaccaggaggct
gaacaagtgaaacaggcactggatacggagctgaaggacaagtacaactcagtggaggac
ttgattgaacagaaggcagggggcgtggccagtgccaagaagagggcggagcagctgcag
caggaggccaaagagctgctttcacaggccagcagcaagctgcagcagctgaaagattta
gagaagtcctatgaagtaaaccagcatacactggaggccaaggcagctgaactggtggaa
ctggaacgagcaattagggagctgctcaatgacatcagtcacaaggttacagtgtacagc
acctgtctcttctaa
DBGET
integrated database retrieval system
