Scleropages formosus (Asian bonytongue): 108931651
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Entry
108931651 CDS
T04919
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108931651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108931651
03036 Chromosome and associated proteins [BR:
sfm03036
]
108931651
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108931651
Coactivators
SAGA/TFTC/STAGA complex
108931651
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108931651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
108931651
NCBI-ProteinID:
XP_029102005
LinkDB
All DBs
Position
19:10745090..10781019
Genome browser
AA seq
1165 aa
AA seq
DB search
MPVDAGETQTPSVGGAADAGGGDVALEVAAGGAVAARGALLPDRRGVSGDLNIQGAPCSE
TPLSNRHDAAAAAGTTFSSLGTAGTAGTTVGPLGTASRPVSTVGTAGTTVSIVSKAGTPS
STVGISGTTIGSLGTAGTPVSIVGTAGAIIGSLSTAGTPMTIVSKAGTPSSTVGTAGTAG
GSLGTAGTPVSTVGTAGATSSSLGTAGTSVTAVGTVGATVGPLGTAGRPVSTVGTAGTPV
SIVGTAGTIIGSFGTAGTPVAIVSKAGTPSSSVGISGTTVGSLGTAGTPVSTVGTAGTTL
SIVGTAGAIIGSLGTAGTPMTIVSKTGTPSSTVGTAGTAVGTAGTPVSTVGTAGATSSSL
STAGTPVAAVGTVGRAGTTVGPLGTAGRPVSTVGTAGTPMSIMGTAGAIIGSLGTAGTPV
AVVSTAGTPSSTVGTAGATIGALGTAGTSSSAVVTAGTPVYINLHTSGVSSTPSSTVPKI
VISAGRLGSELPAAIGTRSSPAALPPKAAGQGGVGVSLATASQVGVARLATISQVPGKET
VITLPRAATPQASGGQRGAQGASVQLPANFQIPQGMMLIRSESGQLMLVSQQALAQAQAQ
GIIPRAAGTANGSVARAAAPQGSAAAAFKKADAAAAVRAPPVPSSTPGTSYQKMSVLKVR
GYTAGQTVRPAVPPQSAAPLVIPTKTEGPKTAPVATISAETLENVKKCKNFLVTLIKLAS
SGTHSAEMAKNVKELVKSLLDGKIEPEEFTDRLYMELKSSPQPYLVPFLKRSLPAVRQLT
PNSQLFIQQCAPLSSTKPTPVPAAVPPMTGAAVSKTLQANAGVNQPLKATQATRPTQLVI
QQPRGVVIKQSAVPASAQSKAAPKQLVTALQTTSHPTGAAVKQSPLQVSRIISLQPPQVQ
KIPFKDTASASFRDEDDINDVASMAGVNLNEENARILATNSEHVGTIVRSCRDDPFLSVA
ALQKRIVEIGKRHGVADIGTDVVSLVSYATQERLRELVEKLTAVAQHRNASYKDDLTYRQ
TTDTRSQLRFLEQLDRLERRRKEEEEREVLLRIAKSRSNREDPELLRLKQKAKEMQQLEL
AQTQQRDANLTALAAIGPRKKRPLESLGYGSGNEAPGALASSASSVVKQSSVHRVTRVSL
RDLVFCMEQDPALRHSLCLYRALIR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggacgctggagagacacagactccgtccgtagggggcgctgccgatgctgga
ggcggggatgttgcgctggaagtggccgcgggaggagccgttgctgcccggggggctctg
ctgcctgaccggcggggtgtgtccggcgatttgaacatccagggggccccctgttcagaa
acccccctctccaaccgccatgatgcggctgccgcagctgggactacgttcagctcgctt
ggcacagctggcacagctgggactacagtcggcccacttggcacagctagcagacccgtg
tctacagtgggaacagctggcacaaccgtgtctatagtcagcaaagctggcacaccctca
tctactgtcggcatatctgggactacaatcggctcgcttggcacagctggcacacctgtg
tctatagtgggcacagctggggccataattggctcacttagcacagctggcacacctatg
actatagtaagcaaagctggcacaccctcatctactgttggcacagctgggactgcaggt
ggctcacttggcacagctggcacacctgtgtctacagtgggcacagctggggctacaagc
agctcacttggcacagctggcacttccgtgactgcagtgggcacagttggggctacagtt
ggcccacttggcacagctggcagacctgtgtctacagtgggcacagctggcacgcccgtg
tctatagtgggcacagctgggaccataattggctcatttggcacagctggcacgcctgtg
gctatagtcagcaaagctggcacaccctcatcttctgtcggcatatctgggactacagtc
ggctcacttggcacagctggcacacccgtctctacagtaggaacagctggcacaactctg
tctatagtgggcacagctggggccataattggctcacttggcacagctggcacacctatg
actatagtaagcaaaactggcacaccctcatctactgttggcacagctgggactgcagtt
ggcacagctggcacacctgtgtctacagtgggcacagctggggctacaagcagctcgctt
agcacagctggcactcctgtggctgcagttggcacagtgggcagagctgggactacagtc
ggcccacttggcacagctggcagacctgtgtctacagtgggcacagctggcacacccatg
tctataatgggcacagctggggccataatcggctcacttggcacagctggcacaccggtg
gctgtagtcagtacagctggcacaccctcatctactgtcggcacagctggggctacaatc
ggcgcactcggcacagctggcacatcctcgtctgcggttgtcaccgccggcacacctgtc
tacataaatctgcacacctccggtgtgtccagcaccccttcctccacggtgcctaagatt
gtgattagcgccgggcgacttggctccgagctcccagccgcgatcgggaccagatcgagt
cccgcggcgcttcctccgaaagctgcaggccagggcggcgtcggcgtcagcttggcgacc
gcctcgcaggtcggggttgctcggctcgccacgatttcccaggtgccgggcaaggagacc
gtaatcaccctgcccagggctgcaactccgcaggccagtggggggcagcgcggcgctcag
ggcgcctccgtgcagctgcctgccaacttccagatccctcaaggcatgatgctcatcagg
agcgagagcgggcagcttatgctggtgtcccagcaggctctggcccaggcccaggcccag
gggatcatccctagggccgccgggactgccaacggctccgtcgccagggccgcggcgccg
cagggttctgcagcagcagcttttaagaaagcggatgctgcagctgctgtaagagcacca
cctgtgccgagcagcacacctggcacttcctaccaaaagatgtctgtcctaaaggtaaga
ggctacactgctggtcaaactgtgcgtccagctgtccccccacaaagtgctgcgcctttg
gtcattcccactaaaactgagggacccaaaaccgcacctgtagccaccatctctgcggaa
accctggagaatgtgaagaaatgtaagaatttcctagtgacgttaattaagctggcctcc
agcggaacacattctgctgaaatggcaaaaaatgtgaaggagttggtgaaaagtctgctg
gatggaaaaattgagccagaggagtttacagacagactttacatggagctgaagtcgtct
ccacagccttatcttgttccctttctcaagaggagtctaccagctgtgcgccagctcacc
ccaaactcgcagctcttcatccagcagtgtgcaccgctgtcgtccacaaagcccactccc
gtccctgcagctgtaccgcctatgactggggcagcagtgagcaagaccttgcaggcaaat
gcaggggttaaccagccgcttaaagccacgcaggctaccaggcccacccagctggtgatc
cagcagcctagaggagttgtgataaagcagtctgccgtgccggcgtctgcgcagagcaaa
gccgcaccaaagcagctggtgacagcgctgcagacgacttcacatcccacaggagcggct
gtgaagcagtcacctcttcaggtgtccagaattatcagcctgcagccccctcaggtgcag
aaaatccccttcaaggacactgcatctgcatccttcagagacgaggatgacatcaacgat
gtggcctccatggcaggtgtgaacctcaacgaggagaacgctcgcatcctagcaaccaac
tcggagcatgtgggtaccatagtgcggtcctgcagagatgacccattcctctcagtggct
gctttacagaagcggatcgtggagatcggtaagcggcacggcgtcgcggatatcggcacg
gatgttgtgagccttgtgtcttacgccacacaggagcggttaagggagctggtggagaag
ctgacagcagtggcccagcatcgaaacgcatcgtacaaggatgacctgacctatcggcag
acgactgacactcgctcccagctacggttcctggagcagctggaccggctggaaaggcgc
aggaaagaggaggaggagagggaagtgctcctacgcatcgccaagagccgttcaaaccga
gaagaccctgagctgctacgactgaagcagaaggccaaggagatgcagcagttggaactg
gcacagacgcaacaaagagatgcaaatctgactgcgctcgcagctattgggcctaggaag
aaacgaccactcgagtccctgggctacggatcgggaaacgaggcacctggcgctcttgct
tcctcggcctcctctgtcgtcaagcagtcgtcggtccacagggtcaccagggtcagcctg
cgggacctggtcttctgcatggaacaggacccggcactgaggcactcgctctgcttgtac
cgggctctgatcagatga
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