Scleropages formosus (Asian bonytongue): 108932050
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Entry
108932050 CDS
T04919
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108932050 (hnf1b)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108932050 (hnf1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
108932050
NCBI-ProteinID:
XP_029111107
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Position
10:complement(12099378..12117758)
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AA seq
698 aa
AA seq
DB search
MSASPLVTVLYRLPSSLQHHGTRARPVPQEGGPLPAPAGRCPQLRRALSTEPAPNRTAAT
TSVVRGFAFVFFSPHATSTATLSPFSSSSSSSSPFLPRLAPVQGCPSSDAGVSEGTRRMF
AKMVSKLTPLQQELLSALLDSGVTKDVLVQALDDMEPSPAAAFGVKLENLQMSPPSSKAN
NGGGGESDSKPPPVFHTLTNGHGKGSKLSGDEGSEDGDDFDTPPILKELQALNTEEAAEQ
RAEVERMLSEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRA
ALYTWYVRKQREILRQFNQAVQGSGSNMTDKGNQDQVLFFFPEFNQPGQGVGPQGDEVGS
EPSCKKMRRNRFKWGPASQQILYQAYERQKNPSKEERETLVEECNRAECLQRGVSPSKAH
GLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSAPAHGLNPLLSHSSPHQPQASPSPS
GKMQGVRYSQQASEVTSSSSINHHGNNAMATSQSVLQQVSPGGLDPSHSLLSPDAKMISA
SGGGLPPVSTLTNIHSSHHPHQQTQNLIMPLSGVMAIAQTLNTSQAQTVPVINSVAGSLA
ALQPVQFPQQLHSPHQQGLMQQSPSHMAQQPFMTAASHSHMYPHKQEPPQYSHPSRFPSA
MVVTDTNSLSTLSSMSSSKQAMWHSHMLVSPGVSLLDL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagcccacttgttactgttttatatcggctgccctcctccctccagcatcat
ggcacacgagcgcgccctgtcccgcaggaaggcggcccgctccccgctcccgcaggcagg
tgccctcaactccggagggcgctgagcaccgaacccgcgccgaaccgaaccgcggccacc
acaagcgtcgtccgcggctttgctttcgtttttttttccccccacgccacgtccaccgcc
actctctctccgttctcctcctcctcctcctcctcctcgcccttccttcctcgtctcgca
ccggttcaaggctgcccgtcgtcggacgccggcgtctcagaaggtactcgccgaatgttc
gcgaagatggtgtcgaagctcacacctctgcagcaggagctgctgagcgcgctgctcgac
tccggagtgaccaaagacgtgctcgtccaggcgctcgacgacatggagccgtcgcccgcc
gccgccttcggagtaaagctcgagaacctgcagatgtccccgccgagctcgaaagcgaac
aacggcggcggcggcgagtcggattccaagccgccgccggtcttccacacgctcaccaac
ggccacggcaagggcagcaagctgtccggcgacgagggctccgaggacggcgacgacttc
gacacgccgccgatcctcaaggagctccaggccctgaacacggaggaggcggcggagcag
agggcggaggtggagcggatgctgtccgaggacccgtggcgcgccgcgcgcatgatcaaa
ggctacatgcagcagcacaacatcccgcagcgcgaggtggtggacgtcaccgggctcaac
cagtcgcacctgtcgcagcacctgaacaagggaacgcccatgaagacgcagaagcgcgcg
gcgctctacacctggtacgtccggaagcagcgcgagatcctgcgacagttcaaccaggca
gtgcaaggttctggcagcaatatgacagacaaaggcaatcaggatcaggtgctgtttttt
ttcccagagttcaatcagcctgggcaaggggtggggccccagggcgacgaggtaggctct
gaaccctcctgcaagaaaatgcgtcgcaaccgattcaagtgggggccagcgtcccagcaa
atcctctaccaggcctatgagcggcagaagaaccccagtaaggaggagagggagacacta
gtggaggagtgcaacagggcggagtgtctacagaggggcgtgtctccttcaaaagcccat
ggcctgggttcaaacttggtcacagaggtgcgtgtctacaactggttcgccaaccgccgc
aaagaggaggccttccgacagaagttggccatggatgcctacagtgcccccgcccatggt
ctgaaccccctcctgtcccatagttcccctcaccagccgcaggccagcccctctccatca
ggcaagatgcaaggagtccggtacagccagcaggcgagcgaggtcacttcctcctcatct
atcaatcaccatggcaacaacgccatggcaaccagccagtccgtactgcagcaggtgtca
ccaggaggcctggacccaagccacagcctgctgtcacctgacgccaagatgatttctgct
tcgggcggaggcctaccacctgtcagtacactgaccaacatccacagctctcaccacccc
caccagcagacccagaacctcatcatgcccctgtctggagtcatggccattgcacagaca
ctgaacacgtcgcaggcacagacagtgccagtcatcaacagtgtggcaggcagcctggca
gcgctgcagccagttcagttcccacagcagctgcacagcccccaccagcagggtctcatg
cagcagtcacctagtcacatggcccagcagcccttcatgaccgccgcctcgcactcacac
atgtaccctcataagcaggagcctccccagtactcgcacccctcccgcttcccctctgcc
atggtggtgacagacaccaacagcctcagcaccctgagctccatgtcctccagcaaacag
gccatgtggcacagccatatgctagtatctcctggtgtcagcctgctggacctgtga
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