Scleropages formosus (Asian bonytongue): 108932179
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Entry
108932179 CDS
T04919
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108932179 (npas1)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108932179 (npas1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
108932179
NCBI-ProteinID:
XP_029111067
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All DBs
Position
10:21198104..21226975
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AA seq
786 aa
AA seq
DB search
MAAMPFAGEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KLLPLPGAITSQLDKASVIRLTISYLHMRHFASQGEPPWGPLLEGGPNCTKAVHHPSHSL
ATDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPA
DHVEMAEHLGIRPHLRAEAGCQGSHESASSSASTSSLAETPEPAPASPLKSEDDPPDRGF
FIRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSPRSLQRPLGLVALAHTLPPST
LNEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYQFIHAEDLNTLRQSH
EDLLRKGQVVTGYYRWLQRRGGFQWVQSCATVSVNHKAPHERNVIWVNYVLSRTEMPDTP
LDLLQLPESLRDERVRASSSPRDASPQTQGTSAAQPVKCSSSKGSSGSQVKEGYAQYSHP
PNGQTEEKKKRTQQADPKHGPLEKRQRKGVQEDEEGNPSASSDLGSDSEAEEEEVGADRR
CQADGKMVKREEGASKQSGGATRIRADTIQNGRAVIQQLKSGVASAAANVKTEQNFMVSG
TTLSGGRWGHSKLSLQTPSRAQNGDAAPASVPDSTATPPGTEAPPGGLLASSSPGLSPPM
EGSPLPREERGLAGGRGPDFELLQRLAVGGAASRVLFHPLAIGPQGPQSLYAPSTIRYAP
AELASAHPTAESLPSDHHKPPAFFPHLQRIAALPPFSGFSSSDPTFPPGLPFCVNGLRGG
TGSEED
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatgccgttcgccggcgaggggaagtgtgtcagcgtggagtgggacttcctg
cagggcctgctggccaagccaccgacgctgccctgcttgcagaacctgaggaaggagaag
tcccgcaatgctgcgcgctcccgacgcgggaaggaaaactttgaattcttcgagctcgcc
aagttgctgcctcttccgggtgccatcaccagccagctggacaaggcgtccgtcatccgc
ctcacaatcagctacctgcacatgcgccactttgcgagtcagggagagccgccgtggggc
cccctgctggagggaggaccaaactgcaccaaggcagtgcaccacccctcgcactccttg
gccacggacatgttcgagcaacacctgggagcccacctgttgcagtccttggacggcttt
gtgttcgtggtcagccaagaaggacgcttcctctacatctccgagacggtttccatctac
ctgggcctctcgcaggtggagctcacaggcagcagcgtctttgactacatccatccggcc
gaccatgtggagatggccgaacacctgggtatcagacctcacctgagagcggaggcagga
tgtcaagggagccacgagagcgcctccagctcggcgtccacgtcctccctggccgagacc
ccagaaccagcccctgccagccccctgaagtcagaagacgatccccccgacaggggattc
ttcatccgcatgaagtccaccctcactaagcgtgggctgcacgtcaagtcctccgggtac
aaggtcatccatgtcaccgggcggatccgctgtcgccccgcactggtcccaggctccccc
cgctcgctgcagaggccactgggattggtggccctggctcacacacttccgccctccacc
ctgaacgaagttcgcatggagagccatatgtttgtgttccgtgtgaatatggacctgcag
gtcacctactgcgagaacaggatttcagagtacatggacctcagtccagcagaggttgtg
ggacacacatgttaccagttcatccatgcagaggacctaaacaccctgcggcagagccat
gaagacttgttgcggaaggggcaggtggtgacgggttactaccgctggctgcagcggcgc
gggggattccagtgggtccagtcatgcgccaccgtctccgtcaaccacaaagcgccccat
gagcgcaacgtcatctgggtcaactacgttctcagtcggacagaaatgccggacacgccg
ctggacttgcttcagctgccagagagcctgagggatgagcgagtgcgagcgagctcctct
cctcgggacgcctccccgcagacccagggcacctctgctgcacaacctgttaaatgctcc
agcagcaaaggcagttcagggtcccaggtgaaggaggggtatgcgcagtattcccatccg
cctaatggccaaacggaggagaaaaagaagaggacacaacaggccgacccaaagcacggt
cccctggaaaagcgacagagaaaaggtgtccaggaggatgaggaggggaacccatccgct
tcttcagacctggggagcgacagtgaggcggaggaggaagaggtgggtgctgataggagg
tgccaagcagacggcaagatggtgaagcgggaggagggggcttcaaaacagagcgggggt
gcgacgcggatccgagcagacacgatccagaacggccgcgccgtcatccagcagctgaag
agcggagtggcctccgccgctgccaacgtcaagactgagcagaatttcatggtctcaggg
acgaccctgtcgggggggcgctgggggcactctaagctctccctgcagacaccctccaga
gcccaaaacggagacgcagccccggcgtccgttccggactccaccgcgacccctcctggg
acagaagccccacccggaggtctgctcgcttcctcgtccccgggactttctccccccatg
gaaggctcccccctgcccagggaagagcgaggcctggctggaggccggggtccagacttc
gagctgctgcagaggctggcagtgggcggggctgccagcagggtgctcttccaccccttg
gccatcggcccccagggccctcaaagcctgtacgccccaagcaccatccgctacgccccg
gccgagctcgcctccgcccacccgaccgccgagagtctgccctcggaccaccacaagccc
cccgccttcttcccccacctgcagagaattgccgccctgccccccttcagcgggttctct
tcctctgaccccacgttccctcctggactgccattctgcgtgaacgggctgcgagggggc
accggttcagaggaggactga
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